RNA–Protein interactions for RNA: ENST00000357811.7

COL13A1-202, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,991 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-202ENST00000357811 DDX3YO15523 660 aaKnown RBP22.14■■□□□ 1.13
COL13A1-202ENST00000357811 FTLP02792 175 aaPredicted RBP22.14■■□□□ 1.13
COL13A1-202ENST00000357811 MESDQ14696 234 aa22.14■■□□□ 1.13
COL13A1-202ENST00000357811 PADI6Q6TGC4 694 aa22.14■■□□□ 1.13
COL13A1-202ENST00000357811 OTUD6BQ8N6M0 293 aa22.14■■□□□ 1.13
COL13A1-202ENST00000357811 MYCBPAPQ8TBZ2 947 aa22.14■■□□□ 1.13
COL13A1-202ENST00000357811 SLC5A5Q92911 643 aa22.14■■□□□ 1.13
COL13A1-202ENST00000357811 CCDC127Q96BQ5 260 aa22.14■■□□□ 1.13
COL13A1-202ENST00000357811 C18orf8Q96DM3 657 aa22.14■■□□□ 1.13
COL13A1-202ENST00000357811 SERPINA10Q9UK55 444 aa22.14■■□□□ 1.13
COL13A1-202ENST00000357811 YDJCA8MPS7 323 aa22.13■■□□□ 1.13
COL13A1-202ENST00000357811 EIF3DO15371 548 aaKnown RBP eCLIP22.13■■□□□ 1.13
COL13A1-202ENST00000357811 KIAA0754O94854 1291 aa22.13■■□□□ 1.13
COL13A1-202ENST00000357811 TMC3Q7Z5M5 1100 aa22.13■■□□□ 1.13
COL13A1-202ENST00000357811 PHLDB2Q86SQ0 1253 aa22.13■■□□□ 1.13
COL13A1-202ENST00000357811 TMEM39BQ9GZU3 492 aa22.13■■□□□ 1.13
COL13A1-202ENST00000357811 PPIP5K2O43314 1243 aa22.13■■□□□ 1.13
COL13A1-202ENST00000357811 ITGB5P18084 799 aa22.13■■□□□ 1.13
COL13A1-202ENST00000357811 CALR3Q96L12 384 aaKnown RBP22.13■■□□□ 1.13
COL13A1-202ENST00000357811 KIFC3Q9BVG8 833 aa22.13■■□□□ 1.13
COL13A1-202ENST00000357811 PTPN22Q9Y2R2 807 aa22.13■■□□□ 1.13
COL13A1-202ENST00000357811 ALG6Q9Y672 507 aa22.13■■□□□ 1.13
COL13A1-202ENST00000357811 H0YHG0 523 aa22.12■■□□□ 1.13
COL13A1-202ENST00000357811 H0YIN7 160 aa22.12■■□□□ 1.13
COL13A1-202ENST00000357811 SHBGP04278 402 aa22.12■■□□□ 1.13
COL13A1-202ENST00000357811 DR1Q01658 176 aa22.12■■□□□ 1.13
COL13A1-202ENST00000357811 PPP2R5CQ13362 524 aa22.12■■□□□ 1.13
COL13A1-202ENST00000357811 BTNL9Q6UXG8 535 aa22.12■■□□□ 1.13
COL13A1-202ENST00000357811 LDHDQ86WU2 507 aa22.12■■□□□ 1.13
COL13A1-202ENST00000357811 CD302Q8IX05 232 aa22.12■■□□□ 1.13
COL13A1-202ENST00000357811 LOC102724159A0A0B4J2E5 919 aa22.12■■□□□ 1.13
COL13A1-202ENST00000357811 GTPBP10A4D1E9 387 aaKnown RBP22.12■■□□□ 1.13
COL13A1-202ENST00000357811 CCDC188H7C350 402 aa22.12■■□□□ 1.13
COL13A1-202ENST00000357811 TMEM253P0C7T8 217 aa22.12■■□□□ 1.13
COL13A1-202ENST00000357811 PWP2Q15269 919 aaKnown RBP22.12■■□□□ 1.13
COL13A1-202ENST00000357811 NSMFQ6X4W1 530 aa22.12■■□□□ 1.13
COL13A1-202ENST00000357811 RPUSD2Q8IZ73 545 aaKnown RBP22.12■■□□□ 1.13
COL13A1-202ENST00000357811 POP1Q99575 1024 aaKnown RBP22.12■■□□□ 1.13
COL13A1-202ENST00000357811 FRMPD4Q14CM0 1322 aa22.12■■□□□ 1.13
COL13A1-202ENST00000357811 PIK3CDO00329 1044 aa22.11■■□□□ 1.13
COL13A1-202ENST00000357811 NFIBO00712 420 aa22.11■■□□□ 1.13
COL13A1-202ENST00000357811 C21orf2O43822 256 aa22.11■■□□□ 1.13
COL13A1-202ENST00000357811 MAPK7Q13164 816 aa22.11■■□□□ 1.13
COL13A1-202ENST00000357811 RASGEF1CQ8N431 466 aa22.11■■□□□ 1.13
COL13A1-202ENST00000357811 TEKT3Q9BXF9 490 aa22.11■■□□□ 1.13
COL13A1-202ENST00000357811 COL20A1Q9P218 1284 aa22.11■■□□□ 1.13
COL13A1-202ENST00000357811 CES2O00748 559 aa22.11■■□□□ 1.13
COL13A1-202ENST00000357811 SLC26A4O43511 780 aa22.11■■□□□ 1.13
COL13A1-202ENST00000357811 APBA3O96018 575 aa22.11■■□□□ 1.13
COL13A1-202ENST00000357811 GUCY2CP25092 1073 aa22.11■■□□□ 1.13
COL13A1-202ENST00000357811 MIER3Q7Z3K6 550 aa22.11■■□□□ 1.13
COL13A1-202ENST00000357811 PPM1KQ8N3J5 372 aa22.11■■□□□ 1.13
COL13A1-202ENST00000357811 FMO2Q99518 471 aa22.11■■□□□ 1.13
COL13A1-202ENST00000357811 AGPAT1Q99943 283 aa22.11■■□□□ 1.13
COL13A1-202ENST00000357811 MYH11P35749 1972 aa22.11■■□□□ 1.13
COL13A1-202ENST00000357811 ONECUT3O60422 494 aaPredicted RBP22.11■■□□□ 1.13
COL13A1-202ENST00000357811 PPATQ06203 517 aa22.11■■□□□ 1.13
COL13A1-202ENST00000357811 QPCTQ16769 361 aa22.11■■□□□ 1.13
COL13A1-202ENST00000357811 LRRC37AA6NMS7 1700 aa22.1■■□□□ 1.13
COL13A1-202ENST00000357811 A0A0A6YYK5 440 aaPredicted RBP22.1■■□□□ 1.13
COL13A1-202ENST00000357811 TCRBV7S2A1N4TA0A589 114 aa22.1■■□□□ 1.13
COL13A1-202ENST00000357811 SGPL1O95470 568 aa22.1■■□□□ 1.13
COL13A1-202ENST00000357811 SLCO1A2P46721 670 aa22.1■■□□□ 1.13
COL13A1-202ENST00000357811 MAP2K1Q02750 393 aaPredicted RBP22.1■■□□□ 1.13
COL13A1-202ENST00000357811 ICE2Q659A1 982 aa22.1■■□□□ 1.13
COL13A1-202ENST00000357811 MCTP2Q6DN12 878 aa22.1■■□□□ 1.13
COL13A1-202ENST00000357811 SAAL1Q96ER3 474 aa22.1■■□□□ 1.13
COL13A1-202ENST00000357811 KCNH7Q9NS40 1196 aa22.1■■□□□ 1.13
COL13A1-202ENST00000357811 DMAC2Q9NW81 257 aa22.1■■□□□ 1.13
COL13A1-202ENST00000357811 SLC16A4O15374 487 aa22.1■■□□□ 1.13
COL13A1-202ENST00000357811 SORBS3O60504 671 aa22.1■■□□□ 1.13
COL13A1-202ENST00000357811 FBXO25Q8TCJ0 367 aa22.1■■□□□ 1.13
COL13A1-202ENST00000357811 PLEKHO2Q8TD55 490 aa22.1■■□□□ 1.13
COL13A1-202ENST00000357811 ATP8B4Q8TF62 1192 aa22.1■■□□□ 1.13
COL13A1-202ENST00000357811 TMOD2Q9NZR1 351 aa22.1■■□□□ 1.13
COL13A1-202ENST00000357811 KCNJ1P48048 391 aa22.09■■□□□ 1.13
COL13A1-202ENST00000357811 SOX10P56693 466 aa22.09■■□□□ 1.13
COL13A1-202ENST00000357811 SLITRK6Q9H5Y7 841 aa22.09■■□□□ 1.13
COL13A1-202ENST00000357811 TMX2Q9Y320 296 aa22.09■■□□□ 1.13
COL13A1-202ENST00000357811 DAAM1Q9Y4D1 1078 aa22.09■■□□□ 1.13
COL13A1-202ENST00000357811 SPATA31A6Q5VVP1 1343 aa22.09■■□□□ 1.13
COL13A1-202ENST00000357811 PHF20L1A8MW92 1017 aa22.09■■□□□ 1.13
COL13A1-202ENST00000357811 CYP26A1O43174 497 aa22.09■■□□□ 1.13
COL13A1-202ENST00000357811 VIL1P09327 827 aaKnown RBP22.09■■□□□ 1.13
COL13A1-202ENST00000357811 VAMP7P51809 220 aa22.09■■□□□ 1.13
COL13A1-202ENST00000357811 STXBP4Q6ZWJ1 553 aa22.09■■□□□ 1.13
COL13A1-202ENST00000357811 LMO3Q8TAP4 145 aa22.09■■□□□ 1.13
COL13A1-202ENST00000357811 PNMA2Q9UL42 364 aa22.09■■□□□ 1.13
COL13A1-202ENST00000357811 CCPG1Q9ULG6 757 aa22.09■■□□□ 1.13
COL13A1-202ENST00000357811 CAND2O75155 1236 aa22.08■■□□□ 1.13
COL13A1-202ENST00000357811 NPEPPSP55786 919 aa22.08■■□□□ 1.13
COL13A1-202ENST00000357811 PEX3P56589 373 aa22.08■■□□□ 1.13
COL13A1-202ENST00000357811 EPC2Q52LR7 807 aa22.08■■□□□ 1.13
COL13A1-202ENST00000357811 PLA2G4FQ68DD2 849 aa22.08■■□□□ 1.13
COL13A1-202ENST00000357811 B4GALNT4Q76KP1 1039 aa22.08■■□□□ 1.13
COL13A1-202ENST00000357811 ZDHHC14Q8IZN3 488 aa22.08■■□□□ 1.13
COL13A1-202ENST00000357811 PCDHB18PQ96TA0 734 aa22.08■■□□□ 1.13
COL13A1-202ENST00000357811 SYT11Q9BT88 431 aa22.08■■□□□ 1.13
COL13A1-202ENST00000357811 ZHX2Q9Y6X8 837 aa22.08■■□□□ 1.13
COL13A1-202ENST00000357811 C10orf71Q711Q0 1435 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms