RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 NLRP11P59045 1033 aaKnown RBP6.16□□□□□ -1.42
BRCA1-203ENST00000357654 CSNK2BP67870 215 aa6.16□□□□□ -1.42
BRCA1-203ENST00000357654 RASSF7Q02833 373 aa6.16□□□□□ -1.42
BRCA1-203ENST00000357654 TNNI3KQ59H18 835 aa6.16□□□□□ -1.42
BRCA1-203ENST00000357654 C20orf194Q5TEA3 1177 aa6.16□□□□□ -1.42
BRCA1-203ENST00000357654 KIFC3Q9BVG8 833 aa6.16□□□□□ -1.42
BRCA1-203ENST00000357654 LSG1Q9H089 658 aaKnown RBP6.16□□□□□ -1.42
BRCA1-203ENST00000357654 BRD8Q9H0E9 1235 aa6.16□□□□□ -1.42
BRCA1-203ENST00000357654 RNPEPQ9H4A4 650 aa6.16□□□□□ -1.42
BRCA1-203ENST00000357654 LATS2Q9NRM7 1088 aa6.16□□□□□ -1.42
BRCA1-203ENST00000357654 USP17L3A6NCW0 530 aa6.16□□□□□ -1.42
BRCA1-203ENST00000357654 USP17L4A6NCW7 530 aa6.16□□□□□ -1.42
BRCA1-203ENST00000357654 K7ERI5 159 aa6.16□□□□□ -1.42
BRCA1-203ENST00000357654 PEX3P56589 373 aa6.16□□□□□ -1.42
BRCA1-203ENST00000357654 TTLL4Q14679 1199 aa6.16□□□□□ -1.42
BRCA1-203ENST00000357654 TRIP4Q15650 581 aaPredicted RBP6.16□□□□□ -1.42
BRCA1-203ENST00000357654 CCDC141Q6ZP82 1450 aa6.16□□□□□ -1.42
BRCA1-203ENST00000357654 USP17L1Q7RTZ2 530 aa6.16□□□□□ -1.42
BRCA1-203ENST00000357654 CENPSQ8N2Z9 138 aa6.16□□□□□ -1.42
BRCA1-203ENST00000357654 MIER2Q8N344 545 aa6.16□□□□□ -1.42
BRCA1-203ENST00000357654 SLC25A41Q8N5S1 370 aa6.16□□□□□ -1.42
BRCA1-203ENST00000357654 TTC13Q8NBP0 860 aa6.16□□□□□ -1.42
BRCA1-203ENST00000357654 ZNF280CQ8ND82 737 aa6.16□□□□□ -1.42
BRCA1-203ENST00000357654 PLBD2Q8NHP8 589 aa6.16□□□□□ -1.42
BRCA1-203ENST00000357654 RASGRP4Q8TDF6 673 aa6.16□□□□□ -1.42
BRCA1-203ENST00000357654 INPP5DQ92835 1189 aa6.16□□□□□ -1.42
BRCA1-203ENST00000357654 TMEM87BQ96K49 555 aa6.16□□□□□ -1.42
BRCA1-203ENST00000357654 SOHLH2Q9NX45 425 aa6.16□□□□□ -1.42
BRCA1-203ENST00000357654 MAD2L2Q9UI95 211 aa6.16□□□□□ -1.42
BRCA1-203ENST00000357654 SCAF8Q9UPN6 1271 aaKnown RBP6.16□□□□□ -1.42
BRCA1-203ENST00000357654 SCINQ9Y6U3 715 aa6.16□□□□□ -1.42
BRCA1-203ENST00000357654 PPIP5K1Q6PFW1 1433 aa6.16□□□□□ -1.42
BRCA1-203ENST00000357654 EYA2O00167 538 aa6.16□□□□□ -1.42
BRCA1-203ENST00000357654 GFPT2O94808 682 aa6.16□□□□□ -1.42
BRCA1-203ENST00000357654 SCNN1AP37088 669 aa6.16□□□□□ -1.42
BRCA1-203ENST00000357654 HUNKP57058 714 aa6.16□□□□□ -1.42
BRCA1-203ENST00000357654 NOLC1Q14978 699 aaKnown RBP eCLIP6.16□□□□□ -1.42
BRCA1-203ENST00000357654 IQCF2Q8IXL9 164 aa6.16□□□□□ -1.42
BRCA1-203ENST00000357654 BLIDQ8IZY5 108 aa6.16□□□□□ -1.42
BRCA1-203ENST00000357654 ANKRD13CQ8N6S4 541 aa6.16□□□□□ -1.42
BRCA1-203ENST00000357654 ZNF496Q96IT1 587 aaPredicted RBP6.16□□□□□ -1.42
BRCA1-203ENST00000357654 SPON1Q9HCB6 807 aa6.16□□□□□ -1.42
BRCA1-203ENST00000357654 TOPORSQ9NS56 1045 aaPredicted RBP6.16□□□□□ -1.42
BRCA1-203ENST00000357654 ABCB11O95342 1321 aa6.15□□□□□ -1.42
BRCA1-203ENST00000357654 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.15□□□□□ -1.42
BRCA1-203ENST00000357654 KCNJ18B7U540 433 aa6.15□□□□□ -1.42
BRCA1-203ENST00000357654 H0Y626 953 aa6.15□□□□□ -1.42
BRCA1-203ENST00000357654 TPD52L2O43399 206 aaKnown RBP6.15□□□□□ -1.42
BRCA1-203ENST00000357654 PPP6R2O75170 966 aa6.15□□□□□ -1.42
BRCA1-203ENST00000357654 ZNF24P17028 368 aa6.15□□□□□ -1.42
BRCA1-203ENST00000357654 PHKA2P46019 1235 aa6.15□□□□□ -1.42
BRCA1-203ENST00000357654 DDX39BQ13838 428 aaKnown RBP6.15□□□□□ -1.42
BRCA1-203ENST00000357654 KCNJ12Q14500 433 aa6.15□□□□□ -1.42
BRCA1-203ENST00000357654 GRAMD1BQ3KR37 738 aa6.15□□□□□ -1.42
BRCA1-203ENST00000357654 FAM133BQ5BKY9 247 aaKnown RBP6.15□□□□□ -1.42
BRCA1-203ENST00000357654 IYDQ6PHW0 289 aa6.15□□□□□ -1.42
BRCA1-203ENST00000357654 PNMA1Q8ND90 353 aa6.15□□□□□ -1.42
BRCA1-203ENST00000357654 TTC17Q96AE7 1141 aa6.15□□□□□ -1.42
BRCA1-203ENST00000357654 CARD6Q9BX69 1037 aa6.15□□□□□ -1.42
BRCA1-203ENST00000357654 PALMDQ9NP74 551 aa6.15□□□□□ -1.42
BRCA1-203ENST00000357654 FAM217BQ9NTX9 383 aaPredicted RBP6.15□□□□□ -1.42
BRCA1-203ENST00000357654 FAM32AQ9Y421 112 aaKnown RBP6.15□□□□□ -1.42
BRCA1-203ENST00000357654 A8MXQ7 604 aa6.15□□□□□ -1.42
BRCA1-203ENST00000357654 AP3D1O14617 1153 aa6.15□□□□□ -1.42
BRCA1-203ENST00000357654 CYP27B1O15528 508 aa6.15□□□□□ -1.42
BRCA1-203ENST00000357654 ALDH1L1O75891 902 aa6.15□□□□□ -1.42
BRCA1-203ENST00000357654 RARBP10826 455 aa6.15□□□□□ -1.42
BRCA1-203ENST00000357654 CTSWP56202 376 aa6.15□□□□□ -1.42
BRCA1-203ENST00000357654 FASTKD1Q53R41 847 aaKnown RBP6.15□□□□□ -1.42
BRCA1-203ENST00000357654 C9orf131Q5VYM1 1079 aa6.15□□□□□ -1.42
BRCA1-203ENST00000357654 HLA-DQA1Q5Y7H0 255 aa6.15□□□□□ -1.42
BRCA1-203ENST00000357654 LRRC8EQ6NSJ5 796 aa6.15□□□□□ -1.42
BRCA1-203ENST00000357654 ESRP1Q6NXG1 681 aaKnown RBP6.15□□□□□ -1.42
BRCA1-203ENST00000357654 JAMLQ86YT9 394 aa6.15□□□□□ -1.42
BRCA1-203ENST00000357654 MAGOHBQ96A72 148 aaKnown RBP6.15□□□□□ -1.42
BRCA1-203ENST00000357654 KIF12Q96FN5 646 aa6.15□□□□□ -1.42
BRCA1-203ENST00000357654 DYDC2Q96IM9 177 aa6.15□□□□□ -1.42
BRCA1-203ENST00000357654 BTBD9Q96Q07 612 aa6.15□□□□□ -1.42
BRCA1-203ENST00000357654 AMNQ9BXJ7 453 aa6.15□□□□□ -1.42
BRCA1-203ENST00000357654 GCOM2Q9BZD3 368 aaPredicted RBP6.15□□□□□ -1.42
BRCA1-203ENST00000357654 NDEL1Q9GZM8 345 aa6.15□□□□□ -1.42
BRCA1-203ENST00000357654 MYLK2Q9H1R3 596 aa6.15□□□□□ -1.42
BRCA1-203ENST00000357654 SHROOM2Q13796 1616 aa6.15□□□□□ -1.42
BRCA1-203ENST00000357654 DYNC1LI2O43237 492 aaPredicted RBP6.15□□□□□ -1.42
BRCA1-203ENST00000357654 FKBP9O95302 570 aa6.15□□□□□ -1.42
BRCA1-203ENST00000357654 BMP3P12645 472 aa6.15□□□□□ -1.42
BRCA1-203ENST00000357654 MORC3Q14149 939 aa6.15□□□□□ -1.42
BRCA1-203ENST00000357654 CNGA2Q16280 664 aa6.15□□□□□ -1.42
BRCA1-203ENST00000357654 ZNF699Q32M78 642 aa6.15□□□□□ -1.42
BRCA1-203ENST00000357654 COLEC12Q5KU26 742 aa6.15□□□□□ -1.42
BRCA1-203ENST00000357654 C11orf88Q6PI97 169 aa6.15□□□□□ -1.42
BRCA1-203ENST00000357654 FKBP9P1Q75LS8 142 aa6.15□□□□□ -1.42
BRCA1-203ENST00000357654 CYFIP1Q7L576 1253 aa6.15□□□□□ -1.42
BRCA1-203ENST00000357654 PODNQ7Z5L7 613 aa6.15□□□□□ -1.42
BRCA1-203ENST00000357654 NEK8Q86SG6 692 aa6.15□□□□□ -1.42
BRCA1-203ENST00000357654 CEP70Q8NHQ1 597 aa6.15□□□□□ -1.42
BRCA1-203ENST00000357654 CLMNQ96JQ2 1002 aa6.15□□□□□ -1.42
BRCA1-203ENST00000357654 TUFT1Q9NNX1 390 aa6.15□□□□□ -1.42
BRCA1-203ENST00000357654 PCSK1NQ9UHG2 260 aa6.15□□□□□ -1.42
BRCA1-203ENST00000357654 GPN3Q9UHW5 284 aaPredicted RBP6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms