RNA–Protein interactions for RNA: ENST00000356660.8

BDNF-202, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,018 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-202ENST00000356660 ARHGAP23Q9P227 1491 aa13.47□□□□□ -0.25
BDNF-202ENST00000356660 ATMINO43313 823 aaPredicted RBP13.47□□□□□ -0.25
BDNF-202ENST00000356660 TPD52L2O43399 206 aaKnown RBP13.47□□□□□ -0.25
BDNF-202ENST00000356660 CA4P22748 312 aa13.47□□□□□ -0.25
BDNF-202ENST00000356660 RANBP1P43487 201 aa13.47□□□□□ -0.25
BDNF-202ENST00000356660 ODR4Q5SWX8 454 aa13.47□□□□□ -0.25
BDNF-202ENST00000356660 ERMARDQ5T6L9 678 aa13.47□□□□□ -0.25
BDNF-202ENST00000356660 SEPT14Q6ZU15 432 aa13.47□□□□□ -0.25
BDNF-202ENST00000356660 ZNF34Q8IZ26 560 aa13.47□□□□□ -0.25
BDNF-202ENST00000356660 SYN2Q92777 582 aaPredicted RBP13.47□□□□□ -0.25
BDNF-202ENST00000356660 IQCGQ9H095 443 aaKnown RBP13.47□□□□□ -0.25
BDNF-202ENST00000356660 SUCLA2Q9P2R7 463 aaPredicted RBP13.47□□□□□ -0.25
BDNF-202ENST00000356660 PPP1R9AQ9ULJ8 1098 aa13.47□□□□□ -0.25
BDNF-202ENST00000356660 RAD17O75943 681 aa13.46□□□□□ -0.25
BDNF-202ENST00000356660 MYBP10242 640 aa13.46□□□□□ -0.25
BDNF-202ENST00000356660 TRIM59Q8IWR1 403 aa13.46□□□□□ -0.25
BDNF-202ENST00000356660 C9orf72Q96LT7 481 aa13.46□□□□□ -0.25
BDNF-202ENST00000356660 LRRC37BQ96QE4 947 aa13.46□□□□□ -0.25
BDNF-202ENST00000356660 FAM118BQ9BPY3 351 aa13.46□□□□□ -0.25
BDNF-202ENST00000356660 ALG6Q9Y672 507 aa13.46□□□□□ -0.25
BDNF-202ENST00000356660 FAM187AA6NFU0 413 aa13.46□□□□□ -0.25
BDNF-202ENST00000356660 ATP2A1O14983 1001 aa13.46□□□□□ -0.25
BDNF-202ENST00000356660 SEPT2Q15019 361 aa13.46□□□□□ -0.25
BDNF-202ENST00000356660 ZC3H18Q86VM9 953 aaKnown RBP13.46□□□□□ -0.25
BDNF-202ENST00000356660 ZNF408Q9H9D4 720 aa13.46□□□□□ -0.25
BDNF-202ENST00000356660 MRC1P22897 1456 aa13.46□□□□□ -0.26
BDNF-202ENST00000356660 A8MUI8 341 aa13.46□□□□□ -0.26
BDNF-202ENST00000356660 PON1P27169 355 aa13.46□□□□□ -0.26
BDNF-202ENST00000356660 STRN3Q13033 797 aa13.46□□□□□ -0.26
BDNF-202ENST00000356660 TTBK2Q6IQ55 1244 aa13.46□□□□□ -0.26
BDNF-202ENST00000356660 MIGA2Q7L4E1 593 aa13.46□□□□□ -0.26
BDNF-202ENST00000356660 ERICH1Q86X53 443 aa13.46□□□□□ -0.26
BDNF-202ENST00000356660 CCT6BQ92526 530 aa13.46□□□□□ -0.26
BDNF-202ENST00000356660 CSRNP1Q96S65 589 aa13.46□□□□□ -0.26
BDNF-202ENST00000356660 THAP2Q9H0W7 228 aa13.46□□□□□ -0.26
BDNF-202ENST00000356660 STK32BQ9NY57 414 aa13.46□□□□□ -0.26
BDNF-202ENST00000356660 ETAA1Q9NY74 926 aa13.46□□□□□ -0.26
BDNF-202ENST00000356660 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.46□□□□□ -0.26
BDNF-202ENST00000356660 HOXA13P31271 388 aaPredicted RBP13.45□□□□□ -0.26
BDNF-202ENST00000356660 CCNHP51946 323 aaPredicted RBP13.45□□□□□ -0.26
BDNF-202ENST00000356660 XRCC4Q13426 336 aa13.45□□□□□ -0.26
BDNF-202ENST00000356660 CTTNQ14247 550 aaKnown RBP13.45□□□□□ -0.26
BDNF-202ENST00000356660 MMTAG2Q9BU76 263 aaKnown RBP13.45□□□□□ -0.26
BDNF-202ENST00000356660 SLC12A6Q9UHW9 1150 aa13.45□□□□□ -0.26
BDNF-202ENST00000356660 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.45□□□□□ -0.26
BDNF-202ENST00000356660 SYNGAP1Q96PV0 1343 aa13.45□□□□□ -0.26
BDNF-202ENST00000356660 DNAJC8O75937 253 aaPredicted RBP13.45□□□□□ -0.26
BDNF-202ENST00000356660 TARSP26639 723 aaKnown RBP13.45□□□□□ -0.26
BDNF-202ENST00000356660 CHRNA3P32297 505 aa13.45□□□□□ -0.26
BDNF-202ENST00000356660 CLUL1Q15846 466 aa13.45□□□□□ -0.26
BDNF-202ENST00000356660 ABCB5Q2M3G0 1257 aa13.45□□□□□ -0.26
BDNF-202ENST00000356660 ANKRD35Q8N283 1001 aa13.45□□□□□ -0.26
BDNF-202ENST00000356660 DTX3LQ8TDB6 740 aa13.45□□□□□ -0.26
BDNF-202ENST00000356660 LRRC15Q8TF66 581 aa13.45□□□□□ -0.26
BDNF-202ENST00000356660 SCFD1Q8WVM8 642 aa13.45□□□□□ -0.26
BDNF-202ENST00000356660 NAP1L4Q99733 375 aaKnown RBP13.45□□□□□ -0.26
BDNF-202ENST00000356660 GGA2Q9UJY4 613 aa13.45□□□□□ -0.26
BDNF-202ENST00000356660 PNMA3Q9UL41 463 aa13.45□□□□□ -0.26
BDNF-202ENST00000356660 LRRC37A3O60309 1634 aa13.45□□□□□ -0.26
BDNF-202ENST00000356660 EXOC1LA0A1B0GW35 172 aa13.45□□□□□ -0.26
BDNF-202ENST00000356660 GHRP10912 638 aa13.45□□□□□ -0.26
BDNF-202ENST00000356660 MAPK7Q13164 816 aa13.45□□□□□ -0.26
BDNF-202ENST00000356660 PPP4R3CPQ6ZMV5 832 aa13.45□□□□□ -0.26
BDNF-202ENST00000356660 FGFBP2Q9BYJ0 223 aa13.45□□□□□ -0.26
BDNF-202ENST00000356660 DHX36Q9H2U1 1008 aaKnown RBP13.45□□□□□ -0.26
BDNF-202ENST00000356660 NR2E1Q9Y466 385 aa13.45□□□□□ -0.26
BDNF-202ENST00000356660 AFDNP55196 1824 aaKnown RBP13.44□□□□□ -0.26
BDNF-202ENST00000356660 USP17L10C9JJH3 530 aa13.44□□□□□ -0.26
BDNF-202ENST00000356660 NMT1P30419 496 aaKnown RBP13.44□□□□□ -0.26
BDNF-202ENST00000356660 SOX5P35711 763 aa13.44□□□□□ -0.26
BDNF-202ENST00000356660 CTCFP49711 727 aaPredicted RBP13.44□□□□□ -0.26
BDNF-202ENST00000356660 DHX34Q14147 1143 aaKnown RBP13.44□□□□□ -0.26
BDNF-202ENST00000356660 PDIA5Q14554 519 aa13.44□□□□□ -0.26
BDNF-202ENST00000356660 SLC30A9Q6PML9 568 aa13.44□□□□□ -0.26
BDNF-202ENST00000356660 EPM2AIP1Q7L775 607 aaPredicted RBP13.44□□□□□ -0.26
BDNF-202ENST00000356660 SCFD2Q8WU76 684 aa13.44□□□□□ -0.26
BDNF-202ENST00000356660 GLT8D2Q9H1C3 349 aa13.44□□□□□ -0.26
BDNF-202ENST00000356660 PICK1Q9NRD5 415 aa13.44□□□□□ -0.26
BDNF-202ENST00000356660 CCDC189A1A4V9 331 aa13.44□□□□□ -0.26
BDNF-202ENST00000356660 ATF7P17544 494 aaPredicted RBP13.44□□□□□ -0.26
BDNF-202ENST00000356660 DNAJC3Q13217 504 aa13.44□□□□□ -0.26
BDNF-202ENST00000356660 NKX1-1Q15270 411 aaPredicted RBP13.44□□□□□ -0.26
BDNF-202ENST00000356660 CCDC62Q6P9F0 684 aa13.44□□□□□ -0.26
BDNF-202ENST00000356660 RNF207Q6ZRF8 634 aa13.44□□□□□ -0.26
BDNF-202ENST00000356660 SPZ1Q9BXG8 430 aa13.44□□□□□ -0.26
BDNF-202ENST00000356660 AIPL1Q9NZN9 384 aa13.44□□□□□ -0.26
BDNF-202ENST00000356660 TTC7AQ9ULT0 858 aaPredicted RBP13.44□□□□□ -0.26
BDNF-202ENST00000356660 FOXO6A8MYZ6 492 aa13.44□□□□□ -0.26
BDNF-202ENST00000356660 TXNDC9O14530 226 aa13.44□□□□□ -0.26
BDNF-202ENST00000356660 ITIH4Q14624 930 aa13.44□□□□□ -0.26
BDNF-202ENST00000356660 ARHGEF1Q92888 912 aaKnown RBP13.44□□□□□ -0.26
BDNF-202ENST00000356660 SMC6Q96SB8 1091 aa13.44□□□□□ -0.26
BDNF-202ENST00000356660 HAO1Q9UJM8 370 aa13.44□□□□□ -0.26
BDNF-202ENST00000356660 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.44□□□□□ -0.26
BDNF-202ENST00000356660 ATXN2Q99700 1313 aaKnown RBP13.44□□□□□ -0.26
BDNF-202ENST00000356660 LAMA4Q16363 1823 aa13.44□□□□□ -0.26
BDNF-202ENST00000356660 A0A0G2JND7 137 aa13.43□□□□□ -0.26
BDNF-202ENST00000356660 RSPH10B2B2RC85 870 aa13.43□□□□□ -0.26
BDNF-202ENST00000356660 MAPK13O15264 365 aa13.43□□□□□ -0.26
BDNF-202ENST00000356660 RSPH10BP0C881 870 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms