RNA–Protein interactions for RNA: ENST00000356005.8

FN1-204, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-204ENST00000356005 SV2CQ496J9 727 aa12.03□□□□□ -0.48
FN1-204ENST00000356005 CYFIP1Q7L576 1253 aa12.03□□□□□ -0.48
FN1-204ENST00000356005 DDX53Q86TM3 631 aaKnown RBP12.03□□□□□ -0.48
FN1-204ENST00000356005 SAMD3Q8N6K7 520 aa12.03□□□□□ -0.48
FN1-204ENST00000356005 SEPT1Q8WYJ6 367 aa12.03□□□□□ -0.48
FN1-204ENST00000356005 VCPKMTQ9H867 229 aa12.03□□□□□ -0.48
FN1-204ENST00000356005 IFT172Q9UG01 1749 aa12.03□□□□□ -0.48
FN1-204ENST00000356005 POTEB3A0JP26 581 aa12.03□□□□□ -0.48
FN1-204ENST00000356005 E5RI56 91 aa12.03□□□□□ -0.48
FN1-204ENST00000356005 KDM1AO60341 852 aa12.03□□□□□ -0.48
FN1-204ENST00000356005 CAMTA2O94983 1202 aa12.03□□□□□ -0.48
FN1-204ENST00000356005 EHHADHQ08426 723 aa12.03□□□□□ -0.48
FN1-204ENST00000356005 LRRC41Q15345 812 aa12.03□□□□□ -0.48
FN1-204ENST00000356005 POTEBQ6S5H4 581 aa12.03□□□□□ -0.48
FN1-204ENST00000356005 TRMT2AQ8IZ69 625 aaKnown RBP12.03□□□□□ -0.48
FN1-204ENST00000356005 TMEM169Q96HH4 297 aa12.03□□□□□ -0.48
FN1-204ENST00000356005 MAN1B1Q9UKM7 699 aa12.03□□□□□ -0.48
FN1-204ENST00000356005 TECPR2O15040 1411 aa12.03□□□□□ -0.48
FN1-204ENST00000356005 H7C4K7 107 aa12.03□□□□□ -0.48
FN1-204ENST00000356005 FOXO4P98177 505 aa12.03□□□□□ -0.48
FN1-204ENST00000356005 IL9RQ01113 521 aa12.03□□□□□ -0.48
FN1-204ENST00000356005 NSUN4Q96CB9 384 aaKnown RBP12.03□□□□□ -0.48
FN1-204ENST00000356005 TRPC7Q9HCX4 862 aa12.03□□□□□ -0.48
FN1-204ENST00000356005 SNX2O60749 519 aa12.03□□□□□ -0.48
FN1-204ENST00000356005 SBK1Q52WX2 424 aa12.03□□□□□ -0.48
FN1-204ENST00000356005 C12orf60Q5U649 245 aa12.03□□□□□ -0.48
FN1-204ENST00000356005 PDIK1LQ8N165 341 aa12.03□□□□□ -0.48
FN1-204ENST00000356005 MED15Q96RN5 788 aa12.03□□□□□ -0.48
FN1-204ENST00000356005 PCDHA5Q9Y5H7 936 aa12.03□□□□□ -0.48
FN1-204ENST00000356005 GPR182O15218 404 aa12.03□□□□□ -0.48
FN1-204ENST00000356005 LRG1P02750 347 aa12.03□□□□□ -0.48
FN1-204ENST00000356005 NR3C1P04150 777 aa12.03□□□□□ -0.48
FN1-204ENST00000356005 MARCH10Q8NA82 808 aaPredicted RBP12.03□□□□□ -0.48
FN1-204ENST00000356005 Q9H521 79 aa12.03□□□□□ -0.48
FN1-204ENST00000356005 PTPRUQ92729 1446 aa12.03□□□□□ -0.48
FN1-204ENST00000356005 PPP1R12AO14974 1030 aaPredicted RBP12.03□□□□□ -0.48
FN1-204ENST00000356005 DYNC1LI2O43237 492 aaPredicted RBP12.03□□□□□ -0.48
FN1-204ENST00000356005 WASHC5Q12768 1159 aa12.03□□□□□ -0.48
FN1-204ENST00000356005 TBCCQ15814 346 aa12.03□□□□□ -0.48
FN1-204ENST00000356005 CENPUQ71F23 418 aa12.03□□□□□ -0.48
FN1-204ENST00000356005 DYDC2Q96IM9 177 aa12.03□□□□□ -0.48
FN1-204ENST00000356005 RSRC1Q96IZ7 334 aaKnown RBP12.03□□□□□ -0.48
FN1-204ENST00000356005 TEX12Q9BXU0 123 aa12.03□□□□□ -0.48
FN1-204ENST00000356005 LY9Q9HBG7 655 aa12.03□□□□□ -0.48
FN1-204ENST00000356005 MTMR4Q9NYA4 1195 aa12.03□□□□□ -0.48
FN1-204ENST00000356005 MAGED2Q9UNF1 606 aaPredicted RBP12.03□□□□□ -0.48
FN1-204ENST00000356005 SDC4P31431 198 aa12.02□□□□□ -0.48
FN1-204ENST00000356005 ATP6V1E1P36543 226 aa12.02□□□□□ -0.48
FN1-204ENST00000356005 RBP5P82980 135 aa12.02□□□□□ -0.48
FN1-204ENST00000356005 TMEM132DQ14C87 1099 aa12.02□□□□□ -0.48
FN1-204ENST00000356005 EPHA7Q15375 998 aa12.02□□□□□ -0.48
FN1-204ENST00000356005 POTEDQ86YR6 584 aa12.02□□□□□ -0.48
FN1-204ENST00000356005 RNF149Q8NC42 400 aa12.02□□□□□ -0.48
FN1-204ENST00000356005 EPAS1Q99814 870 aa12.02□□□□□ -0.48
FN1-204ENST00000356005 LMBRD1Q9NUN5 540 aa12.02□□□□□ -0.48
FN1-204ENST00000356005 LRRD1A4D1F6 860 aa12.02□□□□□ -0.48
FN1-204ENST00000356005 GOLGA8KD6RF30 607 aa12.02□□□□□ -0.48
FN1-204ENST00000356005 CYP2D6P10635 497 aa12.02□□□□□ -0.48
FN1-204ENST00000356005 ARHGAP18Q8N392 663 aa12.02□□□□□ -0.48
FN1-204ENST00000356005 MGARPQ8TDB4 240 aa12.02□□□□□ -0.48
FN1-204ENST00000356005 COLEC11Q9BWP8 271 aa12.02□□□□□ -0.48
FN1-204ENST00000356005 NWD1Q149M9 1564 aa12.02□□□□□ -0.48
FN1-204ENST00000356005 MROH2AA6NES4 1674 aa12.02□□□□□ -0.48
FN1-204ENST00000356005 A8MXQ7 604 aa12.02□□□□□ -0.48
FN1-204ENST00000356005 INHBEP58166 350 aa12.02□□□□□ -0.48
FN1-204ENST00000356005 SNRPFP62306 86 aaKnown RBP12.02□□□□□ -0.48
FN1-204ENST00000356005 DYNLT1P63172 113 aa12.02□□□□□ -0.48
FN1-204ENST00000356005 ADCK5Q3MIX3 580 aa12.02□□□□□ -0.48
FN1-204ENST00000356005 C16orf86Q6ZW13 317 aa12.02□□□□□ -0.48
FN1-204ENST00000356005 FAM133AQ8N9E0 248 aa12.02□□□□□ -0.48
FN1-204ENST00000356005 RAD54LQ92698 747 aa12.02□□□□□ -0.48
FN1-204ENST00000356005 C17orf102A2RUQ5 167 aa12.02□□□□□ -0.49
FN1-204ENST00000356005 GOLGA8IPA6NC78 632 aa12.02□□□□□ -0.49
FN1-204ENST00000356005 GOLGA8JA6NMD2 632 aa12.02□□□□□ -0.49
FN1-204ENST00000356005 GGPS1O95749 300 aa12.02□□□□□ -0.49
FN1-204ENST00000356005 GNA15P30679 374 aa12.02□□□□□ -0.49
FN1-204ENST00000356005 PRKCQQ04759 706 aa12.02□□□□□ -0.49
FN1-204ENST00000356005 DCUN1D1Q96GG9 259 aa12.02□□□□□ -0.49
FN1-204ENST00000356005 YME1L1Q96TA2 773 aa12.02□□□□□ -0.49
FN1-204ENST00000356005 COBLO75128 1261 aa12.02□□□□□ -0.49
FN1-204ENST00000356005 LINC00301Q8NCQ3 95 aa12.02□□□□□ -0.49
FN1-204ENST00000356005 FBXO41Q8TF61 875 aa12.02□□□□□ -0.49
FN1-204ENST00000356005 NDST4Q9H3R1 872 aa12.02□□□□□ -0.49
FN1-204ENST00000356005 C3P01024 1663 aa12.02□□□□□ -0.49
FN1-204ENST00000356005 NKRFO15226 690 aaKnown RBP eCLIP12.02□□□□□ -0.492e-17■□□□□ 8.6
FN1-204ENST00000356005 ZBED6P86452 979 aa12.02□□□□□ -0.49
FN1-204ENST00000356005 TMEM270Q6UE05 265 aa12.02□□□□□ -0.49
FN1-204ENST00000356005 LMNTD2Q8IXW0 634 aa12.02□□□□□ -0.49
FN1-204ENST00000356005 SOCS4Q8WXH5 440 aa12.02□□□□□ -0.49
FN1-204ENST00000356005 DDX56Q9NY93 547 aaKnown RBP12.02□□□□□ -0.49
FN1-204ENST00000356005 FAM196BA6NMK8 535 aa12.02□□□□□ -0.49
FN1-204ENST00000356005 H3BRJ5 948 aa12.02□□□□□ -0.49
FN1-204ENST00000356005 PODXLO00592 558 aa12.02□□□□□ -0.49
FN1-204ENST00000356005 PSMD3O43242 534 aa12.02□□□□□ -0.49
FN1-204ENST00000356005 UPP2O95045 317 aa12.02□□□□□ -0.49
FN1-204ENST00000356005 CDR2Q01850 454 aa12.02□□□□□ -0.49
FN1-204ENST00000356005 RDM1Q8NG50 284 aa12.02□□□□□ -0.49
FN1-204ENST00000356005 MRFAP1L1Q96HT8 127 aa12.02□□□□□ -0.49
FN1-204ENST00000356005 PPP1R12CQ9BZL4 782 aa12.02□□□□□ -0.49
FN1-204ENST00000356005 FAM217BQ9NTX9 383 aaPredicted RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms