RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 PCDHB6Q9Y5E3 794 aa18.66■□□□□ 0.58
PDLIM7-201ENST00000355572 C5orf42Q9H799 3197 aa18.66■□□□□ 0.58
PDLIM7-201ENST00000355572 OR52Z1P0C646 297 aa18.65■□□□□ 0.58
PDLIM7-201ENST00000355572 GLRA2P23416 452 aa18.65■□□□□ 0.58
PDLIM7-201ENST00000355572 ARL2P36404 184 aa18.65■□□□□ 0.58
PDLIM7-201ENST00000355572 NRIP1P48552 1158 aa18.65■□□□□ 0.58
PDLIM7-201ENST00000355572 SAFBQ15424 915 aaKnown RBP eCLIP18.65■□□□□ 0.58
PDLIM7-201ENST00000355572 IL17AQ16552 155 aa18.65■□□□□ 0.58
PDLIM7-201ENST00000355572 AMHR2Q16671 573 aa18.65■□□□□ 0.58
PDLIM7-201ENST00000355572 TWF2Q6IBS0 349 aaKnown RBP18.65■□□□□ 0.58
PDLIM7-201ENST00000355572 KCNT2Q6UVM3 1135 aa18.65■□□□□ 0.58
PDLIM7-201ENST00000355572 AGMOQ6ZNB7 445 aa18.65■□□□□ 0.58
PDLIM7-201ENST00000355572 OTUD6AQ7L8S5 288 aa18.65■□□□□ 0.58
PDLIM7-201ENST00000355572 THNSL1Q8IYQ7 743 aa18.65■□□□□ 0.58
PDLIM7-201ENST00000355572 JPH2Q9BR39 696 aaPredicted RBP18.65■□□□□ 0.58
PDLIM7-201ENST00000355572 TRAIPQ9BWF2 469 aa18.65■□□□□ 0.58
PDLIM7-201ENST00000355572 EPHX3Q9H6B9 360 aa18.65■□□□□ 0.58
PDLIM7-201ENST00000355572 CHST12Q9NRB3 414 aa18.65■□□□□ 0.58
PDLIM7-201ENST00000355572 ANKEF1Q9NU02 776 aa18.65■□□□□ 0.58
PDLIM7-201ENST00000355572 PCDHB12Q9Y5F1 795 aa18.65■□□□□ 0.58
PDLIM7-201ENST00000355572 TRIP11Q15643 1979 aa18.64■□□□□ 0.58
PDLIM7-201ENST00000355572 USO1O60763 962 aaKnown RBP18.64■□□□□ 0.57
PDLIM7-201ENST00000355572 EOMESO95936 686 aa18.64■□□□□ 0.57
PDLIM7-201ENST00000355572 LAG3P18627 525 aa18.64■□□□□ 0.57
PDLIM7-201ENST00000355572 U2AF2P26368 475 aaKnown RBP eCLIP18.64■□□□□ 0.572e-9■■■□□ 16.8
PDLIM7-201ENST00000355572 FAM43BQ6ZT52 329 aaPredicted RBP18.64■□□□□ 0.57
PDLIM7-201ENST00000355572 MAEAQ7L5Y9 396 aa18.64■□□□□ 0.57
PDLIM7-201ENST00000355572 SLC39A11Q8N1S5 342 aa18.64■□□□□ 0.57
PDLIM7-201ENST00000355572 LRRC43Q8N309 656 aa18.64■□□□□ 0.57
PDLIM7-201ENST00000355572 FAM184AQ8NB25 1140 aa18.64■□□□□ 0.57
PDLIM7-201ENST00000355572 SMG8Q8ND04 991 aaKnown RBP18.64■□□□□ 0.57
PDLIM7-201ENST00000355572 BSNDQ8WZ55 320 aa18.64■□□□□ 0.57
PDLIM7-201ENST00000355572 CPB2Q96IY4 423 aa18.64■□□□□ 0.57
PDLIM7-201ENST00000355572 MSLNLQ96KJ4 702 aa18.64■□□□□ 0.57
PDLIM7-201ENST00000355572 EIF2AQ9BY44 585 aaKnown RBP18.64■□□□□ 0.57
PDLIM7-201ENST00000355572 POLD4Q9HCU8 107 aa18.64■□□□□ 0.57
PDLIM7-201ENST00000355572 DACT1Q9NYF0 836 aa18.64■□□□□ 0.57
PDLIM7-201ENST00000355572 BARX2Q9UMQ3 279 aaPredicted RBP18.64■□□□□ 0.57
PDLIM7-201ENST00000355572 PPME1Q9Y570 386 aa18.64■□□□□ 0.57
PDLIM7-201ENST00000355572 TTLL13PA6NNM8 815 aa18.63■□□□□ 0.57
PDLIM7-201ENST00000355572 PP2D1A8MPX8 630 aa18.63■□□□□ 0.57
PDLIM7-201ENST00000355572 HIDE1A8MVS5 230 aa18.63■□□□□ 0.57
PDLIM7-201ENST00000355572 B4GALT5O43286 388 aa18.63■□□□□ 0.57
PDLIM7-201ENST00000355572 MBTPS2O43462 519 aa18.63■□□□□ 0.57
PDLIM7-201ENST00000355572 TSPAN1O60635 241 aa18.63■□□□□ 0.57
PDLIM7-201ENST00000355572 OFD1O75665 1012 aa18.63■□□□□ 0.57
PDLIM7-201ENST00000355572 EDN1P05305 212 aa18.63■□□□□ 0.57
PDLIM7-201ENST00000355572 PTENP60484 403 aa18.63■□□□□ 0.57
PDLIM7-201ENST00000355572 CDC42EP1Q00587 391 aa18.63■□□□□ 0.57
PDLIM7-201ENST00000355572 MBTD1Q05BQ5 628 aa18.63■□□□□ 0.57
PDLIM7-201ENST00000355572 PLPP4Q5VZY2 271 aa18.63■□□□□ 0.57
PDLIM7-201ENST00000355572 SRGAP1Q7Z6B7 1085 aa18.63■□□□□ 0.57
PDLIM7-201ENST00000355572 CDR2LQ86X02 465 aaPredicted RBP18.63■□□□□ 0.57
PDLIM7-201ENST00000355572 ZNF280BQ86YH2 543 aa18.63■□□□□ 0.57
PDLIM7-201ENST00000355572 FEZF2Q8TBJ5 459 aa18.63■□□□□ 0.57
PDLIM7-201ENST00000355572 MRPS27Q92552 414 aaKnown RBP18.63■□□□□ 0.57
PDLIM7-201ENST00000355572 TBC1D32Q96NH3 1257 aa18.63■□□□□ 0.57
PDLIM7-201ENST00000355572 VN1R3Q9BXE9 311 aa18.63■□□□□ 0.57
PDLIM7-201ENST00000355572 POLR3FQ9H1D9 316 aaPredicted RBP18.63■□□□□ 0.57
PDLIM7-201ENST00000355572 RNF39Q9H2S5 420 aa18.63■□□□□ 0.57
PDLIM7-201ENST00000355572 NRDE2Q9H7Z3 1164 aa18.63■□□□□ 0.57
PDLIM7-201ENST00000355572 TLR9Q9NR96 1032 aa18.63■□□□□ 0.57
PDLIM7-201ENST00000355572 TBC1D13Q9NVG8 400 aa18.63■□□□□ 0.57
PDLIM7-201ENST00000355572 DNAJB4Q9UDY4 337 aa18.63■□□□□ 0.57
PDLIM7-201ENST00000355572 RAPGEFL1Q9UHV5 662 aa18.63■□□□□ 0.57
PDLIM7-201ENST00000355572 PCDHB2Q9Y5E7 798 aa18.63■□□□□ 0.57
PDLIM7-201ENST00000355572 PLXNA3P51805 1871 aa18.63■□□□□ 0.57
PDLIM7-201ENST00000355572 ZNF623O75123 536 aa18.62■□□□□ 0.57
PDLIM7-201ENST00000355572 DDHD2O94830 711 aa18.62■□□□□ 0.57
PDLIM7-201ENST00000355572 BCAR1P56945 870 aa18.62■□□□□ 0.57
PDLIM7-201ENST00000355572 PLCB3Q01970 1234 aa18.62■□□□□ 0.57
PDLIM7-201ENST00000355572 MRPL10Q7Z7H8 261 aaKnown RBP18.62■□□□□ 0.57
PDLIM7-201ENST00000355572 IFNLR1Q8IU57 520 aaPredicted RBP18.62■□□□□ 0.57
PDLIM7-201ENST00000355572 ABI1Q8IZP0 508 aa18.62■□□□□ 0.57
PDLIM7-201ENST00000355572 TCP11Q8WWU5 503 aa18.62■□□□□ 0.57
PDLIM7-201ENST00000355572 ZNF558Q96NG5 402 aa18.62■□□□□ 0.57
PDLIM7-201ENST00000355572 INO80BQ9C086 356 aaPredicted RBP18.62■□□□□ 0.57
PDLIM7-201ENST00000355572 TUFT1Q9NNX1 390 aa18.62■□□□□ 0.57
PDLIM7-201ENST00000355572 INPP5FQ9Y2H2 1132 aa18.62■□□□□ 0.57
PDLIM7-201ENST00000355572 USP20Q9Y2K6 914 aa18.62■□□□□ 0.57
PDLIM7-201ENST00000355572 HES2Q9Y543 173 aa18.62■□□□□ 0.57
PDLIM7-201ENST00000355572 BDP1A6H8Y1 2624 aa18.62■□□□□ 0.57
PDLIM7-201ENST00000355572 MYH11P35749 1972 aa18.61■□□□□ 0.57
PDLIM7-201ENST00000355572 HOXA2O43364 376 aa18.61■□□□□ 0.57
PDLIM7-201ENST00000355572 GAS2O43903 313 aaKnown RBP18.61■□□□□ 0.57
PDLIM7-201ENST00000355572 DGAT1O75907 488 aa18.61■□□□□ 0.57
PDLIM7-201ENST00000355572 GJB2P29033 226 aa18.61■□□□□ 0.57
PDLIM7-201ENST00000355572 KCNC3Q14003 757 aa18.61■□□□□ 0.57
PDLIM7-201ENST00000355572 EFHBQ8N7U6 833 aa18.61■□□□□ 0.57
PDLIM7-201ENST00000355572 AUTS2Q8WXX7 1259 aa18.61■□□□□ 0.57
PDLIM7-201ENST00000355572 POLR3CQ9BUI4 534 aaPredicted RBP18.61■□□□□ 0.57
PDLIM7-201ENST00000355572 C11orf16Q9NQ32 467 aa18.61■□□□□ 0.57
PDLIM7-201ENST00000355572 AAASQ9NRG9 546 aa18.61■□□□□ 0.57
PDLIM7-201ENST00000355572 CDH22Q9UJ99 828 aa18.61■□□□□ 0.57
PDLIM7-201ENST00000355572 ARF4P18085 180 aaPredicted RBP18.6■□□□□ 0.57
PDLIM7-201ENST00000355572 CDC25AP30304 524 aa18.6■□□□□ 0.57
PDLIM7-201ENST00000355572 UBE3AQ05086 875 aa18.6■□□□□ 0.57
PDLIM7-201ENST00000355572 PTGDRQ13258 359 aa18.6■□□□□ 0.57
PDLIM7-201ENST00000355572 DUSP6Q16828 381 aa18.6■□□□□ 0.57
PDLIM7-201ENST00000355572 MICAL1Q8TDZ2 1067 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms