RNA–Protein interactions for RNA: ENST00000355379.3

SCAMP3-202, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 1 (best) BASIC

Gene SCAMP3, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-202ENST00000355379 PPTC7Q8NI37 304 aa24.96■■□□□ 1.59
SCAMP3-202ENST00000355379 TCP11Q8WWU5 503 aa24.96■■□□□ 1.59
SCAMP3-202ENST00000355379 SYN2Q92777 582 aaPredicted RBP24.96■■□□□ 1.59
SCAMP3-202ENST00000355379 CBWD1Q9BRT8 395 aa24.96■■□□□ 1.59
SCAMP3-202ENST00000355379 ZFYVE28Q9HCC9 887 aa24.96■■□□□ 1.59
SCAMP3-202ENST00000355379 IGKV6-21A0A0C4DH24 114 aa24.95■■□□□ 1.58
SCAMP3-202ENST00000355379 ANKRD63C9JTQ0 380 aa24.95■■□□□ 1.58
SCAMP3-202ENST00000355379 HOXC6P09630 235 aa24.95■■□□□ 1.58
SCAMP3-202ENST00000355379 KRT13P13646 458 aa24.95■■□□□ 1.58
SCAMP3-202ENST00000355379 CNGA1P29973 690 aa24.95■■□□□ 1.58
SCAMP3-202ENST00000355379 ACVR2BQ13705 512 aa24.95■■□□□ 1.58
SCAMP3-202ENST00000355379 EXOC3L4Q17RC7 722 aa24.95■■□□□ 1.58
SCAMP3-202ENST00000355379 CCDC170Q8IYT3 715 aa24.95■■□□□ 1.58
SCAMP3-202ENST00000355379 ASAP3Q8TDY4 903 aa24.95■■□□□ 1.58
SCAMP3-202ENST00000355379 GANQ9H2C0 597 aa24.95■■□□□ 1.58
SCAMP3-202ENST00000355379 EPN1Q9Y6I3 576 aaPredicted RBP24.95■■□□□ 1.58
SCAMP3-202ENST00000355379 TISP43B9A030 160 aa24.94■■□□□ 1.58
SCAMP3-202ENST00000355379 GARTP22102 1010 aa24.94■■□□□ 1.58
SCAMP3-202ENST00000355379 ADCYAP1R1P41586 468 aa24.94■■□□□ 1.58
SCAMP3-202ENST00000355379 DPY19L2P1Q6NXN4 242 aa24.94■■□□□ 1.58
SCAMP3-202ENST00000355379 TAS1R3Q7RTX0 852 aa24.94■■□□□ 1.58
SCAMP3-202ENST00000355379 TRIM50Q86XT4 487 aa24.94■■□□□ 1.58
SCAMP3-202ENST00000355379 SMC1BQ8NDV3 1235 aa24.94■■□□□ 1.58
SCAMP3-202ENST00000355379 PCIF1Q9H4Z3 704 aa24.94■■□□□ 1.58
SCAMP3-202ENST00000355379 TMEM134Q9H6X4 195 aa24.94■■□□□ 1.58
SCAMP3-202ENST00000355379 ERAP1Q9NZ08 941 aa24.94■■□□□ 1.58
SCAMP3-202ENST00000355379 FBXL5Q9UKA1 691 aa24.94■■□□□ 1.58
SCAMP3-202ENST00000355379 ZBTB42B2RXF5 422 aa24.93■■□□□ 1.58
SCAMP3-202ENST00000355379 PIGRP01833 764 aa24.93■■□□□ 1.58
SCAMP3-202ENST00000355379 MARK3P27448 753 aa24.93■■□□□ 1.58
SCAMP3-202ENST00000355379 TM4SF4P48230 202 aa24.93■■□□□ 1.58
SCAMP3-202ENST00000355379 FMO5P49326 533 aa24.93■■□□□ 1.58
SCAMP3-202ENST00000355379 TERF1P54274 439 aa24.93■■□□□ 1.58
SCAMP3-202ENST00000355379 ENPEPQ07075 957 aa24.93■■□□□ 1.58
SCAMP3-202ENST00000355379 DUSP28Q4G0W2 176 aa24.93■■□□□ 1.58
SCAMP3-202ENST00000355379 DEPTORQ8TB45 409 aa24.93■■□□□ 1.58
SCAMP3-202ENST00000355379 USP6NLQ92738 828 aa24.93■■□□□ 1.58
SCAMP3-202ENST00000355379 PRIMPOLQ96LW4 560 aa24.93■■□□□ 1.58
SCAMP3-202ENST00000355379 CRACR2AQ9BSW2 395 aa24.93■■□□□ 1.58
SCAMP3-202ENST00000355379 DESI2Q9BSY9 194 aa24.93■■□□□ 1.58
SCAMP3-202ENST00000355379 R3HCC1Q9Y3T6 440 aaKnown RBP24.93■■□□□ 1.58
SCAMP3-202ENST00000355379 NDUFA10O95299 355 aa24.92■■□□□ 1.58
SCAMP3-202ENST00000355379 PON1P27169 355 aa24.92■■□□□ 1.58
SCAMP3-202ENST00000355379 ADSSP30520 456 aa24.92■■□□□ 1.58
SCAMP3-202ENST00000355379 CYLC1P35663 651 aaPredicted RBP24.92■■□□□ 1.58
SCAMP3-202ENST00000355379 SLC39A4Q6P5W5 647 aa24.92■■□□□ 1.58
SCAMP3-202ENST00000355379 RRAGAQ7L523 313 aa24.92■■□□□ 1.58
SCAMP3-202ENST00000355379 GPBP1L1Q9HC44 474 aaPredicted RBP24.92■■□□□ 1.58
SCAMP3-202ENST00000355379 DAAM1Q9Y4D1 1078 aa24.92■■□□□ 1.58
SCAMP3-202ENST00000355379 PAXBP1Q9Y5B6 917 aa24.92■■□□□ 1.58
SCAMP3-202ENST00000355379 DOCK3Q8IZD9 2030 aa24.92■■□□□ 1.58
SCAMP3-202ENST00000355379 LRRC53A6NM62 1247 aa24.91■■□□□ 1.58
SCAMP3-202ENST00000355379 LGALS2P05162 132 aa24.91■■□□□ 1.58
SCAMP3-202ENST00000355379 VAMP7P51809 220 aa24.91■■□□□ 1.58
SCAMP3-202ENST00000355379 STRN3Q13033 797 aa24.91■■□□□ 1.58
SCAMP3-202ENST00000355379 ZNF484Q5JVG2 852 aa24.91■■□□□ 1.58
SCAMP3-202ENST00000355379 FBXL18Q96ME1 805 aa24.91■■□□□ 1.58
SCAMP3-202ENST00000355379 MYO6Q9UM54 1294 aa24.91■■□□□ 1.58
SCAMP3-202ENST00000355379 MGAMO43451 1857 aa24.91■■□□□ 1.58
SCAMP3-202ENST00000355379 KIF3CO14782 793 aa24.91■■□□□ 1.58
SCAMP3-202ENST00000355379 KIAA0391O15091 583 aaKnown RBP24.91■■□□□ 1.58
SCAMP3-202ENST00000355379 P4HA2O15460 535 aa24.91■■□□□ 1.58
SCAMP3-202ENST00000355379 N4BP1O75113 896 aaKnown RBP24.91■■□□□ 1.58
SCAMP3-202ENST00000355379 PPFIA4O75335 1185 aa24.91■■□□□ 1.58
SCAMP3-202ENST00000355379 HOXD8P13378 290 aaPredicted RBP24.91■■□□□ 1.58
SCAMP3-202ENST00000355379 SLC9A1P19634 815 aa24.91■■□□□ 1.58
SCAMP3-202ENST00000355379 POLR2FP61218 127 aaKnown RBP24.91■■□□□ 1.58
SCAMP3-202ENST00000355379 HSP90AA2PQ14568 343 aaPredicted RBP24.91■■□□□ 1.58
SCAMP3-202ENST00000355379 MXD4Q14582 209 aaPredicted RBP24.91■■□□□ 1.58
SCAMP3-202ENST00000355379 KLHDC7AQ5VTJ3 777 aa24.91■■□□□ 1.58
SCAMP3-202ENST00000355379 AFG1LQ8WV93 481 aa24.91■■□□□ 1.58
SCAMP3-202ENST00000355379 NHEJ1Q9H9Q4 299 aaPredicted RBP24.91■■□□□ 1.58
SCAMP3-202ENST00000355379 TRPC6Q9Y210 931 aa24.91■■□□□ 1.58
SCAMP3-202ENST00000355379 STYXL1Q9Y6J8 313 aa24.91■■□□□ 1.58
SCAMP3-202ENST00000355379 COL1A2P08123 1366 aa24.9■■□□□ 1.58
SCAMP3-202ENST00000355379 PHLPP2Q6ZVD8 1323 aa24.9■■□□□ 1.58
SCAMP3-202ENST00000355379 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.9■■□□□ 1.58
SCAMP3-202ENST00000355379 LRRIQ4A6NIV6 560 aa24.9■■□□□ 1.58
SCAMP3-202ENST00000355379 EIF3CLB5ME19 914 aaKnown RBP24.9■■□□□ 1.58
SCAMP3-202ENST00000355379 PMM2O15305 246 aa24.9■■□□□ 1.58
SCAMP3-202ENST00000355379 ADCY3O60266 1144 aa24.9■■□□□ 1.58
SCAMP3-202ENST00000355379 SMPD1P17405 629 aa24.9■■□□□ 1.58
SCAMP3-202ENST00000355379 CAPSQ13938 189 aa24.9■■□□□ 1.58
SCAMP3-202ENST00000355379 GJC2Q5T442 439 aaPredicted RBP24.9■■□□□ 1.58
SCAMP3-202ENST00000355379 RDH13Q8NBN7 331 aa24.9■■□□□ 1.58
SCAMP3-202ENST00000355379 EIF3CQ99613 913 aaKnown RBP24.9■■□□□ 1.58
SCAMP3-202ENST00000355379 SIX2Q9NPC8 291 aa24.9■■□□□ 1.58
SCAMP3-202ENST00000355379 GCNT4Q9P109 453 aa24.9■■□□□ 1.58
SCAMP3-202ENST00000355379 TMEM88BA6NKF7 163 aa24.89■■□□□ 1.57
SCAMP3-202ENST00000355379 K7ERI5 159 aa24.89■■□□□ 1.57
SCAMP3-202ENST00000355379 HNRNPDLO14979 420 aaKnown RBP24.89■■□□□ 1.57
SCAMP3-202ENST00000355379 EFNA5P52803 228 aa24.89■■□□□ 1.57
SCAMP3-202ENST00000355379 ETF1P62495 437 aaKnown RBP24.89■■□□□ 1.57
SCAMP3-202ENST00000355379 SFMBT2Q5VUG0 894 aa24.89■■□□□ 1.57
SCAMP3-202ENST00000355379 TRIM65Q6PJ69 517 aa24.89■■□□□ 1.57
SCAMP3-202ENST00000355379 PRPF31Q8WWY3 499 aaKnown RBP24.89■■□□□ 1.57
SCAMP3-202ENST00000355379 PSPC1Q8WXF1 523 aaKnown RBP24.89■■□□□ 1.57
SCAMP3-202ENST00000355379 SOCS4Q8WXH5 440 aa24.89■■□□□ 1.57
SCAMP3-202ENST00000355379 POMGNT1Q8WZA1 660 aa24.89■■□□□ 1.57
SCAMP3-202ENST00000355379 BICD1Q96G01 975 aa24.89■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms