RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 CCDC188H7C350 402 aa14.09□□□□□ -0.15
SCN8A-202ENST00000355133 NCK2O43639 380 aa14.09□□□□□ -0.15
SCN8A-202ENST00000355133 FASTKD5Q7L8L6 764 aaKnown RBP14.09□□□□□ -0.15
SCN8A-202ENST00000355133 PIP4K2CQ8TBX8 421 aa14.09□□□□□ -0.15
SCN8A-202ENST00000355133 SNX19Q92543 992 aa14.09□□□□□ -0.15
SCN8A-202ENST00000355133 FAM84BQ96KN1 310 aaPredicted RBP14.09□□□□□ -0.15
SCN8A-202ENST00000355133 PRDM5Q9NQX1 630 aaPredicted RBP14.09□□□□□ -0.15
SCN8A-202ENST00000355133 KIF1BO60333 1816 aa14.09□□□□□ -0.15
SCN8A-202ENST00000355133 MAP3K4Q9Y6R4 1608 aa14.09□□□□□ -0.15
SCN8A-202ENST00000355133 HADHAP40939 763 aa14.09□□□□□ -0.15
SCN8A-202ENST00000355133 DONSONQ9NYP3 566 aa14.09□□□□□ -0.15
SCN8A-202ENST00000355133 KITP10721 976 aa14.09□□□□□ -0.15
SCN8A-202ENST00000355133 CHRNA5P30532 468 aa14.09□□□□□ -0.15
SCN8A-202ENST00000355133 HMGCS2P54868 508 aa14.09□□□□□ -0.15
SCN8A-202ENST00000355133 AP1B1Q10567 949 aa14.09□□□□□ -0.15
SCN8A-202ENST00000355133 ACCSLQ4AC99 568 aa14.09□□□□□ -0.15
SCN8A-202ENST00000355133 TTC13Q8NBP0 860 aa14.09□□□□□ -0.15
SCN8A-202ENST00000355133 NCLNQ969V3 563 aa14.09□□□□□ -0.15
SCN8A-202ENST00000355133 GTSE1Q9NYZ3 720 aa14.09□□□□□ -0.15
SCN8A-202ENST00000355133 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.09□□□□□ -0.15
SCN8A-202ENST00000355133 A8MXQ7 604 aa14.09□□□□□ -0.15
SCN8A-202ENST00000355133 TRIM49P0CI25 452 aa14.09□□□□□ -0.15
SCN8A-202ENST00000355133 TRIM49CP0CI26 452 aa14.09□□□□□ -0.15
SCN8A-202ENST00000355133 TBXAS1P24557 533 aaPredicted RBP14.09□□□□□ -0.15
SCN8A-202ENST00000355133 EN1Q05925 392 aaPredicted RBP14.09□□□□□ -0.15
SCN8A-202ENST00000355133 MFSD14CQ5VZR4 134 aa14.09□□□□□ -0.15
SCN8A-202ENST00000355133 ZBTB18Q99592 522 aa14.09□□□□□ -0.15
SCN8A-202ENST00000355133 ELAC2Q9BQ52 826 aaKnown RBP14.09□□□□□ -0.15
SCN8A-202ENST00000355133 MXD4Q14582 209 aaPredicted RBP14.08□□□□□ -0.15
SCN8A-202ENST00000355133 FBXO41Q8TF61 875 aa14.08□□□□□ -0.15
SCN8A-202ENST00000355133 PACSIN2Q9UNF0 486 aaPredicted RBP14.08□□□□□ -0.15
SCN8A-202ENST00000355133 CCDC195A0A1B0GUA6 201 aa14.08□□□□□ -0.16
SCN8A-202ENST00000355133 NFIXQ14938 502 aa14.08□□□□□ -0.16
SCN8A-202ENST00000355133 SERPINI1Q99574 410 aa14.08□□□□□ -0.16
SCN8A-202ENST00000355133 DRC3Q9H069 523 aa14.08□□□□□ -0.16
SCN8A-202ENST00000355133 SUN2Q9UH99 717 aa14.08□□□□□ -0.16
SCN8A-202ENST00000355133 KDM6BO15054 1643 aa14.08□□□□□ -0.16
SCN8A-202ENST00000355133 HMGB1P1B2RPK0 211 aaPredicted RBP14.08□□□□□ -0.16
SCN8A-202ENST00000355133 RASA4BC9J798 803 aa14.08□□□□□ -0.16
SCN8A-202ENST00000355133 RASA4O43374 803 aa14.08□□□□□ -0.16
SCN8A-202ENST00000355133 FTLP02792 175 aaPredicted RBP14.08□□□□□ -0.16
SCN8A-202ENST00000355133 LMBRD2Q68DH5 695 aaPredicted RBP14.08□□□□□ -0.16
SCN8A-202ENST00000355133 CCDC124Q96CT7 223 aaKnown RBP14.08□□□□□ -0.16
SCN8A-202ENST00000355133 KIF12Q96FN5 646 aa14.08□□□□□ -0.16
SCN8A-202ENST00000355133 PITPNM3Q9BZ71 974 aa14.08□□□□□ -0.16
SCN8A-202ENST00000355133 SIK2Q9H0K1 926 aa14.08□□□□□ -0.16
SCN8A-202ENST00000355133 PIDD1Q9HB75 910 aa14.08□□□□□ -0.16
SCN8A-202ENST00000355133 RBAKQ9NYW8 714 aaPredicted RBP14.08□□□□□ -0.16
SCN8A-202ENST00000355133 MAPK13O15264 365 aa14.08□□□□□ -0.16
SCN8A-202ENST00000355133 NOP14P78316 857 aaKnown RBP14.08□□□□□ -0.16
SCN8A-202ENST00000355133 DCAF4L1Q3SXM0 396 aa14.08□□□□□ -0.16
SCN8A-202ENST00000355133 KRT80Q6KB66 452 aa14.08□□□□□ -0.16
SCN8A-202ENST00000355133 PPARGC1AQ9UBK2 798 aaKnown RBP14.08□□□□□ -0.16
SCN8A-202ENST00000355133 CACNB2Q08289 660 aaPredicted RBP14.07□□□□□ -0.16
SCN8A-202ENST00000355133 HSP90AA5PQ58FG0 334 aa14.07□□□□□ -0.16
SCN8A-202ENST00000355133 LDHDQ86WU2 507 aa14.07□□□□□ -0.16
SCN8A-202ENST00000355133 SP8Q8IXZ3 490 aa14.07□□□□□ -0.16
SCN8A-202ENST00000355133 GSPT2Q8IYD1 628 aaKnown RBP14.07□□□□□ -0.16
SCN8A-202ENST00000355133 CYTH2Q99418 400 aa14.07□□□□□ -0.16
SCN8A-202ENST00000355133 ISCA1Q9BUE6 129 aa14.07□□□□□ -0.16
SCN8A-202ENST00000355133 ELP3Q9H9T3 547 aa14.07□□□□□ -0.16
SCN8A-202ENST00000355133 STAP1Q9ULZ2 295 aa14.07□□□□□ -0.16
SCN8A-202ENST00000355133 VGLL3A8MV65 326 aa14.07□□□□□ -0.16
SCN8A-202ENST00000355133 CPB1P15086 417 aa14.07□□□□□ -0.16
SCN8A-202ENST00000355133 POU5F1BQ06416 359 aa14.07□□□□□ -0.16
SCN8A-202ENST00000355133 KRT39Q6A163 491 aa14.07□□□□□ -0.16
SCN8A-202ENST00000355133 GPD1LQ8N335 351 aa14.07□□□□□ -0.16
SCN8A-202ENST00000355133 MARCH10Q8NA82 808 aaPredicted RBP14.07□□□□□ -0.16
SCN8A-202ENST00000355133 GIPC2Q8TF65 315 aa14.07□□□□□ -0.16
SCN8A-202ENST00000355133 SCG3Q8WXD2 468 aaKnown RBP14.07□□□□□ -0.16
SCN8A-202ENST00000355133 SPON2Q9BUD6 331 aa14.07□□□□□ -0.16
SCN8A-202ENST00000355133 NPHP3-ACAD11A0A0J9YXS1 232 aa14.07□□□□□ -0.16
SCN8A-202ENST00000355133 MAP3K7O43318 606 aa14.07□□□□□ -0.16
SCN8A-202ENST00000355133 KRT38O76015 456 aa14.07□□□□□ -0.16
SCN8A-202ENST00000355133 FOXO4P98177 505 aa14.07□□□□□ -0.16
SCN8A-202ENST00000355133 MTMR2Q13614 643 aa14.07□□□□□ -0.16
SCN8A-202ENST00000355133 SPARCL1Q14515 664 aa14.07□□□□□ -0.16
SCN8A-202ENST00000355133 FAM47EQ6ZV65 393 aa14.07□□□□□ -0.16
SCN8A-202ENST00000355133 TRIM4Q9C037 500 aa14.07□□□□□ -0.16
SCN8A-202ENST00000355133 SP110Q9HB58 689 aa14.07□□□□□ -0.16
SCN8A-202ENST00000355133 SUGT1Q9Y2Z0 365 aa14.07□□□□□ -0.16
SCN8A-202ENST00000355133 SCARF1Q14162 830 aa14.07□□□□□ -0.16
SCN8A-202ENST00000355133 PPP4R4Q6NUP7 873 aa14.07□□□□□ -0.16
SCN8A-202ENST00000355133 EMBQ6PCB8 327 aa14.07□□□□□ -0.16
SCN8A-202ENST00000355133 TMED8Q6PL24 325 aaPredicted RBP14.07□□□□□ -0.16
SCN8A-202ENST00000355133 SLC9A2Q9UBY0 812 aa14.07□□□□□ -0.16
SCN8A-202ENST00000355133 WDR19Q8NEZ3 1342 aa14.07□□□□□ -0.16
SCN8A-202ENST00000355133 PLEKHG2Q9H7P9 1386 aa14.07□□□□□ -0.16
SCN8A-202ENST00000355133 MMEP08473 750 aa14.07□□□□□ -0.16
SCN8A-202ENST00000355133 LCP1P13796 627 aa14.07□□□□□ -0.16
SCN8A-202ENST00000355133 FAM102AQ5T9C2 384 aaPredicted RBP14.07□□□□□ -0.16
SCN8A-202ENST00000355133 NFRKBQ6P4R8 1299 aa14.07□□□□□ -0.16
SCN8A-202ENST00000355133 FMR1NBQ8N0W7 255 aaPredicted RBP14.07□□□□□ -0.16
SCN8A-202ENST00000355133 DHX35Q9H5Z1 703 aaKnown RBP14.07□□□□□ -0.16
SCN8A-202ENST00000355133 CYP26B1Q9NR63 512 aa14.07□□□□□ -0.16
SCN8A-202ENST00000355133 PRDM15P57071 1507 aaPredicted RBP14.06□□□□□ -0.16
SCN8A-202ENST00000355133 HOXD10P28358 340 aa14.06□□□□□ -0.16
SCN8A-202ENST00000355133 HEATR6Q6AI08 1181 aaKnown RBP14.06□□□□□ -0.16
SCN8A-202ENST00000355133 SYT2Q8N9I0 419 aaPredicted RBP14.06□□□□□ -0.16
SCN8A-202ENST00000355133 IP6K2Q9UHH9 426 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms