RNA–Protein interactions for RNA: ENST00000354473.4

VPS72-201, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 3

Gene VPS72, Length 1,347 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-201ENST00000354473 HOXA2O43364 376 aa20.84■□□□□ 0.93
VPS72-201ENST00000354473 ATF7P17544 494 aaPredicted RBP20.84■□□□□ 0.93
VPS72-201ENST00000354473 MARCKSP29966 332 aaPredicted RBP20.84■□□□□ 0.93
VPS72-201ENST00000354473 BMPR1AP36894 532 aa20.84■□□□□ 0.93
VPS72-201ENST00000354473 MBTD1Q05BQ5 628 aa20.84■□□□□ 0.93
VPS72-201ENST00000354473 PCBP1Q15365 356 aaKnown RBP eCLIP20.84■□□□□ 0.931e-12■□□□□ 11.1
VPS72-201ENST00000354473 CCDC85BQ15834 202 aaPredicted RBP20.84■□□□□ 0.93
VPS72-201ENST00000354473 FOXD4L5Q5VV16 416 aaPredicted RBP20.84■□□□□ 0.93
VPS72-201ENST00000354473 ZNF598Q86UK7 904 aaKnown RBP20.84■□□□□ 0.93
VPS72-201ENST00000354473 FOXD4L4Q8WXT5 416 aaPredicted RBP20.84■□□□□ 0.93
VPS72-201ENST00000354473 USP28Q96RU2 1077 aa20.84■□□□□ 0.93
VPS72-201ENST00000354473 POLD4Q9HCU8 107 aa20.84■□□□□ 0.93
VPS72-201ENST00000354473 RNF19AQ9NV58 838 aa20.84■□□□□ 0.93
VPS72-201ENST00000354473 TSPAN1O60635 241 aa20.83■□□□□ 0.93
VPS72-201ENST00000354473 EOMESO95936 686 aa20.83■□□□□ 0.93
VPS72-201ENST00000354473 POU3F3P20264 500 aaPredicted RBP20.83■□□□□ 0.93
VPS72-201ENST00000354473 HOXA11P31270 313 aaPredicted RBP20.83■□□□□ 0.93
VPS72-201ENST00000354473 UBA7P41226 1012 aa20.83■□□□□ 0.93
VPS72-201ENST00000354473 RAB27AP51159 221 aa20.83■□□□□ 0.93
VPS72-201ENST00000354473 GPM6BQ13491 265 aa20.83■□□□□ 0.93
VPS72-201ENST00000354473 TMEM119Q4V9L6 283 aa20.83■□□□□ 0.93
VPS72-201ENST00000354473 ABI1Q8IZP0 508 aa20.83■□□□□ 0.93
VPS72-201ENST00000354473 KIFAP3Q92845 792 aa20.83■□□□□ 0.93
VPS72-201ENST00000354473 RUSC1Q9BVN2 902 aa20.83■□□□□ 0.93
VPS72-201ENST00000354473 TMEM117Q9H0C3 514 aa20.83■□□□□ 0.93
VPS72-201ENST00000354473 FAM105AQ9NUU6 356 aa20.83■□□□□ 0.93
VPS72-201ENST00000354473 C5orf67F2Z3F1 127 aa20.82■□□□□ 0.92
VPS72-201ENST00000354473 H3BNC9 293 aa20.82■□□□□ 0.92
VPS72-201ENST00000354473 SLC26A4O43511 780 aa20.82■□□□□ 0.92
VPS72-201ENST00000354473 SSBP05455 408 aaKnown RBP eCLIP20.82■□□□□ 0.92
VPS72-201ENST00000354473 SKIP12755 728 aa20.82■□□□□ 0.92
VPS72-201ENST00000354473 CLLU1OSQ5K130 101 aa20.82■□□□□ 0.92
VPS72-201ENST00000354473 CDCA2Q69YH5 1023 aaPredicted RBP20.82■□□□□ 0.92
VPS72-201ENST00000354473 KCTD17Q8N5Z5 321 aa20.82■□□□□ 0.92
VPS72-201ENST00000354473 CALML4Q96GE6 196 aa20.82■□□□□ 0.92
VPS72-201ENST00000354473 C11orf84Q9BUA3 381 aaPredicted RBP20.82■□□□□ 0.92
VPS72-201ENST00000354473 CSRNP2Q9H175 543 aa20.82■□□□□ 0.92
VPS72-201ENST00000354473 FBXO2Q9UK22 296 aaPredicted RBP20.82■□□□□ 0.92
VPS72-201ENST00000354473 EYSQ5T1H1 3165 aa20.82■□□□□ 0.92
VPS72-201ENST00000354473 RB1P06400 928 aa20.81■□□□□ 0.92
VPS72-201ENST00000354473 ZSCAN22P10073 491 aaPredicted RBP20.81■□□□□ 0.92
VPS72-201ENST00000354473 PDIA4P13667 645 aaKnown RBP20.81■□□□□ 0.92
VPS72-201ENST00000354473 AXLP30530 894 aa20.81■□□□□ 0.92
VPS72-201ENST00000354473 NAMPTP43490 491 aa20.81■□□□□ 0.92
VPS72-201ENST00000354473 PPP2R5AQ15172 486 aa20.81■□□□□ 0.92
VPS72-201ENST00000354473 AMHR2Q16671 573 aa20.81■□□□□ 0.92
VPS72-201ENST00000354473 LONRF3Q496Y0 759 aa20.81■□□□□ 0.92
VPS72-201ENST00000354473 SPOUT1Q5T280 376 aaKnown RBP20.81■□□□□ 0.92
VPS72-201ENST00000354473 RINT1Q6NUQ1 792 aa20.81■□□□□ 0.92
VPS72-201ENST00000354473 ZBTB8OSQ8IWT0 167 aa20.81■□□□□ 0.92
VPS72-201ENST00000354473 RASSF8Q8NHQ8 419 aa20.81■□□□□ 0.92
VPS72-201ENST00000354473 DEPTORQ8TB45 409 aa20.81■□□□□ 0.92
VPS72-201ENST00000354473 HELQQ8TDG4 1101 aa20.81■□□□□ 0.92
VPS72-201ENST00000354473 LPPQ93052 612 aa20.81■□□□□ 0.92
VPS72-201ENST00000354473 CPB2Q96IY4 423 aa20.81■□□□□ 0.92
VPS72-201ENST00000354473 IFT74Q96LB3 600 aa20.81■□□□□ 0.92
VPS72-201ENST00000354473 CASD1Q96PB1 797 aa20.81■□□□□ 0.92
VPS72-201ENST00000354473 C2orf40Q9H1Z8 148 aa20.81■□□□□ 0.92
VPS72-201ENST00000354473 HCSTQ9UBK5 93 aa20.81■□□□□ 0.92
VPS72-201ENST00000354473 PCDHB2Q9Y5E7 798 aa20.81■□□□□ 0.92
VPS72-201ENST00000354473 B4GALT5O43286 388 aa20.8■□□□□ 0.92
VPS72-201ENST00000354473 HIP1RO75146 1068 aa20.8■□□□□ 0.92
VPS72-201ENST00000354473 NCBP1Q09161 790 aaKnown RBP20.8■□□□□ 0.92
VPS72-201ENST00000354473 PKP1Q13835 747 aa20.8■□□□□ 0.92
VPS72-201ENST00000354473 SLC39A14Q15043 492 aa20.8■□□□□ 0.92
VPS72-201ENST00000354473 KARSQ15046 597 aaKnown RBP20.8■□□□□ 0.92
VPS72-201ENST00000354473 UBXN11Q5T124 520 aa20.8■□□□□ 0.92
VPS72-201ENST00000354473 NOTUMQ6P988 496 aa20.8■□□□□ 0.92
VPS72-201ENST00000354473 C1orf186Q6ZWK4 172 aa20.8■□□□□ 0.92
VPS72-201ENST00000354473 KIFC3Q9BVG8 833 aa20.8■□□□□ 0.92
VPS72-201ENST00000354473 PLVAPQ9BX97 442 aa20.8■□□□□ 0.92
VPS72-201ENST00000354473 TYW1Q9NV66 732 aaKnown RBP20.8■□□□□ 0.92
VPS72-201ENST00000354473 LMCD1Q9NZU5 365 aa20.8■□□□□ 0.92
VPS72-201ENST00000354473 SRPRBQ9Y5M8 271 aaKnown RBP20.8■□□□□ 0.92
VPS72-201ENST00000354473 MEIS3P2A8K0S8 358 aa20.79■□□□□ 0.92
VPS72-201ENST00000354473 ZNF623O75123 536 aa20.79■□□□□ 0.92
VPS72-201ENST00000354473 F13A1P00488 732 aa20.79■□□□□ 0.92
VPS72-201ENST00000354473 PLA2G4BP0C869 781 aa20.79■□□□□ 0.92
VPS72-201ENST00000354473 ARF4P18085 180 aaPredicted RBP20.79■□□□□ 0.92
VPS72-201ENST00000354473 PLCG1P19174 1290 aa20.79■□□□□ 0.92
VPS72-201ENST00000354473 SLC12A3P55017 1021 aa20.79■□□□□ 0.92
VPS72-201ENST00000354473 SPECC1Q5M775 1068 aa20.79■□□□□ 0.92
VPS72-201ENST00000354473 DAW1Q8N136 415 aa20.79■□□□□ 0.92
VPS72-201ENST00000354473 LRRC43Q8N309 656 aa20.79■□□□□ 0.92
VPS72-201ENST00000354473 SYT2Q8N9I0 419 aaPredicted RBP20.79■□□□□ 0.92
VPS72-201ENST00000354473 CCDC51Q96ER9 411 aa20.79■□□□□ 0.92
VPS72-201ENST00000354473 DRC1Q96MC2 740 aa20.79■□□□□ 0.92
VPS72-201ENST00000354473 ZNF396Q96N95 335 aaPredicted RBP20.79■□□□□ 0.92
VPS72-201ENST00000354473 CLIC6Q96NY7 704 aa20.79■□□□□ 0.92
VPS72-201ENST00000354473 PRMT7Q9NVM4 692 aaPredicted RBP20.79■□□□□ 0.92
VPS72-201ENST00000354473 MYH11P35749 1972 aa20.79■□□□□ 0.92
VPS72-201ENST00000354473 LIG1P18858 919 aa20.78■□□□□ 0.92
VPS72-201ENST00000354473 GUCY2CP25092 1073 aa20.78■□□□□ 0.92
VPS72-201ENST00000354473 NASPP49321 788 aaPredicted RBP20.78■□□□□ 0.92
VPS72-201ENST00000354473 RAD51AP2Q09MP3 1159 aa20.78■□□□□ 0.92
VPS72-201ENST00000354473 MAPK7Q13164 816 aa20.78■□□□□ 0.92
VPS72-201ENST00000354473 PTPROQ16827 1216 aa20.78■□□□□ 0.92
VPS72-201ENST00000354473 GLB1LQ6UWU2 654 aa20.78■□□□□ 0.92
VPS72-201ENST00000354473 PPP4R3CPQ6ZMV5 832 aa20.78■□□□□ 0.92
VPS72-201ENST00000354473 USP49Q70CQ1 688 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms