RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 MRPL12P52815 198 aaKnown RBP9.15□□□□□ -0.94
CD44-205ENST00000352818 ARHGAP8P85298 464 aa9.15□□□□□ -0.94
CD44-205ENST00000352818 KCNB1Q14721 858 aa9.15□□□□□ -0.94
CD44-205ENST00000352818 VARS2Q5ST30 1063 aaKnown RBP9.15□□□□□ -0.94
CD44-205ENST00000352818 SLFN13Q68D06 897 aa9.15□□□□□ -0.94
CD44-205ENST00000352818 PPP4R3AQ6IN85 833 aa9.15□□□□□ -0.94
CD44-205ENST00000352818 LURAP1LQ8IV03 231 aa9.15□□□□□ -0.94
CD44-205ENST00000352818 DRC7Q8IY82 874 aa9.15□□□□□ -0.94
CD44-205ENST00000352818 GRAMD1CQ8IYS0 662 aa9.15□□□□□ -0.94
CD44-205ENST00000352818 PRPF38AQ8NAV1 312 aaKnown RBP9.15□□□□□ -0.94
CD44-205ENST00000352818 CCDC150Q8NCX0 1101 aa9.15□□□□□ -0.94
CD44-205ENST00000352818 TBCKQ8TEA7 893 aa9.15□□□□□ -0.94
CD44-205ENST00000352818 RTP3Q9BQQ7 232 aa9.15□□□□□ -0.94
CD44-205ENST00000352818 GPCPD1Q9NPB8 672 aa9.15□□□□□ -0.94
CD44-205ENST00000352818 RNF216Q9NWF9 866 aaPredicted RBP9.15□□□□□ -0.94
CD44-205ENST00000352818 DLGAP2Q9P1A6 1054 aa9.15□□□□□ -0.94
CD44-205ENST00000352818 HDAC6Q9UBN7 1215 aa9.15□□□□□ -0.94
CD44-205ENST00000352818 MYH7BA7E2Y1 1941 aa9.15□□□□□ -0.95
CD44-205ENST00000352818 FANCMQ8IYD8 2048 aa9.14□□□□□ -0.95
CD44-205ENST00000352818 ADGRA3Q8IWK6 1321 aa9.14□□□□□ -0.95
CD44-205ENST00000352818 POTEMA6NI47 508 aa9.14□□□□□ -0.95
CD44-205ENST00000352818 C1QTNF9BB2RNN3 333 aa9.14□□□□□ -0.95
CD44-205ENST00000352818 TAF4O00268 1085 aa9.14□□□□□ -0.95
CD44-205ENST00000352818 CCNT1O60563 726 aaKnown RBP9.14□□□□□ -0.95
CD44-205ENST00000352818 KPNA6O60684 536 aa9.14□□□□□ -0.95
CD44-205ENST00000352818 PLA2G6O60733 806 aa9.14□□□□□ -0.95
CD44-205ENST00000352818 ZBED4O75132 1171 aa9.14□□□□□ -0.95
CD44-205ENST00000352818 ARIH2O95376 493 aa9.14□□□□□ -0.95
CD44-205ENST00000352818 C1QTNF9P0C862 333 aa9.14□□□□□ -0.95
CD44-205ENST00000352818 UBA7P41226 1012 aa9.14□□□□□ -0.95
CD44-205ENST00000352818 STAT6P42226 847 aa9.14□□□□□ -0.95
CD44-205ENST00000352818 SLC1A4P43007 532 aa9.14□□□□□ -0.95
CD44-205ENST00000352818 FXR2P51116 673 aaKnown RBP eCLIP9.14□□□□□ -0.95
CD44-205ENST00000352818 FANCCQ00597 558 aa9.14□□□□□ -0.95
CD44-205ENST00000352818 LMNB2Q03252 620 aa9.14□□□□□ -0.95
CD44-205ENST00000352818 RING1Q06587 406 aa9.14□□□□□ -0.95
CD44-205ENST00000352818 TRAF1Q13077 416 aa9.14□□□□□ -0.95
CD44-205ENST00000352818 PTK7Q13308 1070 aa9.14□□□□□ -0.95
CD44-205ENST00000352818 AP3B2Q13367 1082 aa9.14□□□□□ -0.95
CD44-205ENST00000352818 CUL4BQ13620 913 aa9.14□□□□□ -0.95
CD44-205ENST00000352818 NOLC1Q14978 699 aaKnown RBP eCLIP9.14□□□□□ -0.95
CD44-205ENST00000352818 CDC37Q16543 378 aaPredicted RBP9.14□□□□□ -0.95
CD44-205ENST00000352818 LETM2Q2VYF4 491 aa9.14□□□□□ -0.95
CD44-205ENST00000352818 NAALADL2Q58DX5 795 aa9.14□□□□□ -0.95
CD44-205ENST00000352818 TTBK2Q6IQ55 1244 aa9.14□□□□□ -0.95
CD44-205ENST00000352818 POTEGQ6S5H5 508 aa9.14□□□□□ -0.95
CD44-205ENST00000352818 MOXD1Q6UVY6 613 aa9.14□□□□□ -0.95
CD44-205ENST00000352818 TMEM184AQ6ZMB5 413 aa9.14□□□□□ -0.95
CD44-205ENST00000352818 IGSF22Q8N9C0 903 aa9.14□□□□□ -0.95
CD44-205ENST00000352818 POF1BQ8WVV4 589 aa9.14□□□□□ -0.95
CD44-205ENST00000352818 KIFC2Q96AC6 838 aa9.14□□□□□ -0.95
CD44-205ENST00000352818 ZNF689Q96CS4 500 aaPredicted RBP9.14□□□□□ -0.95
CD44-205ENST00000352818 ZNF830Q96NB3 372 aaPredicted RBP9.14□□□□□ -0.95
CD44-205ENST00000352818 MTMR9Q96QG7 549 aa9.14□□□□□ -0.95
CD44-205ENST00000352818 PLVAPQ9BX97 442 aa9.14□□□□□ -0.95
CD44-205ENST00000352818 XPO4Q9C0E2 1151 aaKnown RBP9.14□□□□□ -0.95
CD44-205ENST00000352818 POMKQ9H5K3 350 aa9.14□□□□□ -0.95
CD44-205ENST00000352818 ACAD9Q9H845 621 aa9.14□□□□□ -0.95
CD44-205ENST00000352818 VAT1LQ9HCJ6 419 aa9.14□□□□□ -0.95
CD44-205ENST00000352818 GOPCQ9HD26 462 aa9.14□□□□□ -0.95
CD44-205ENST00000352818 KCND1Q9NSA2 647 aa9.14□□□□□ -0.95
CD44-205ENST00000352818 RNF146Q9NTX7 359 aa9.14□□□□□ -0.95
CD44-205ENST00000352818 KBTBD4Q9NVX7 518 aa9.14□□□□□ -0.95
CD44-205ENST00000352818 CYP39A1Q9NYL5 469 aa9.14□□□□□ -0.95
CD44-205ENST00000352818 IFNKQ9P0W0 207 aa9.14□□□□□ -0.95
CD44-205ENST00000352818 LIMD1Q9UGP4 676 aa9.14□□□□□ -0.95
CD44-205ENST00000352818 LCTP09848 1927 aa9.13□□□□□ -0.95
CD44-205ENST00000352818 F5H6K3 240 aa9.13□□□□□ -0.95
CD44-205ENST00000352818 SLC30A4O14863 429 aa9.13□□□□□ -0.95
CD44-205ENST00000352818 RAD21O60216 631 aa9.13□□□□□ -0.95
CD44-205ENST00000352818 AFMP43652 599 aa9.13□□□□□ -0.95
CD44-205ENST00000352818 OAZ1P54368 228 aa9.13□□□□□ -0.95
CD44-205ENST00000352818 KLRC3Q07444 240 aa9.13□□□□□ -0.95
CD44-205ENST00000352818 KARSQ15046 597 aaKnown RBP9.13□□□□□ -0.95
CD44-205ENST00000352818 DUSP6Q16828 381 aa9.13□□□□□ -0.95
CD44-205ENST00000352818 QRICH1Q2TAL8 776 aa9.13□□□□□ -0.95
CD44-205ENST00000352818 COBLL1Q53SF7 1204 aa9.13□□□□□ -0.95
CD44-205ENST00000352818 MUM1L1Q5H9M0 696 aa9.13□□□□□ -0.95
CD44-205ENST00000352818 ZNF658Q5TYW1 1059 aaPredicted RBP9.13□□□□□ -0.95
CD44-205ENST00000352818 SYDE2Q5VT97 1194 aa9.13□□□□□ -0.95
CD44-205ENST00000352818 SPATA1Q5VX52 437 aa9.13□□□□□ -0.95
CD44-205ENST00000352818 JAKMIP3Q5VZ66 844 aa9.13□□□□□ -0.95
CD44-205ENST00000352818 RRAGBQ5VZM2 374 aa9.13□□□□□ -0.95
CD44-205ENST00000352818 ISM2Q6H9L7 571 aa9.13□□□□□ -0.95
CD44-205ENST00000352818 ANKRD54Q6NXT1 300 aa9.13□□□□□ -0.95
CD44-205ENST00000352818 KCTD1Q719H9 257 aa9.13□□□□□ -0.95
CD44-205ENST00000352818 CABP7Q86V35 215 aa9.13□□□□□ -0.95
CD44-205ENST00000352818 LRRC8AQ8IWT6 810 aa9.13□□□□□ -0.95
CD44-205ENST00000352818 SIX5Q8N196 739 aa9.13□□□□□ -0.95
CD44-205ENST00000352818 KDF1Q8NAX2 398 aaPredicted RBP9.13□□□□□ -0.95
CD44-205ENST00000352818 KLHL23Q8NBE8 558 aa9.13□□□□□ -0.95
CD44-205ENST00000352818 FEZF2Q8TBJ5 459 aa9.13□□□□□ -0.95
CD44-205ENST00000352818 CACTINQ8WUQ7 758 aaKnown RBP9.13□□□□□ -0.95
CD44-205ENST00000352818 P2RX5Q93086 422 aa9.13□□□□□ -0.95
CD44-205ENST00000352818 MBOAT7Q96N66 472 aa9.13□□□□□ -0.95
CD44-205ENST00000352818 MTRQ99707 1265 aa9.13□□□□□ -0.95
CD44-205ENST00000352818 RAB34Q9BZG1 259 aa9.13□□□□□ -0.95
CD44-205ENST00000352818 TLE6Q9H808 572 aa9.13□□□□□ -0.95
CD44-205ENST00000352818 TMEM260Q9NX78 707 aa9.13□□□□□ -0.95
CD44-205ENST00000352818 STK17AQ9UEE5 414 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms