RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 ESRRAP11474 423 aaPredicted RBP17.11■□□□□ 0.33
PTPN11-201ENST00000351677 RASIP1Q5U651 963 aa17.11■□□□□ 0.33
PTPN11-201ENST00000351677 RWDD4Q6NW29 188 aaKnown RBP17.11■□□□□ 0.33
PTPN11-201ENST00000351677 TUBE1Q9UJT0 475 aa17.11■□□□□ 0.33
PTPN11-201ENST00000351677 ANGPTL3Q9Y5C1 460 aa17.11■□□□□ 0.33
PTPN11-201ENST00000351677 STK4Q13043 487 aa17.1■□□□□ 0.33
PTPN11-201ENST00000351677 SBK1Q52WX2 424 aa17.1■□□□□ 0.33
PTPN11-201ENST00000351677 LRRC1Q9BTT6 524 aa17.1■□□□□ 0.33
PTPN11-201ENST00000351677 GRIN1Q05586 938 aa17.1■□□□□ 0.33
PTPN11-201ENST00000351677 SPARCL1Q14515 664 aa17.1■□□□□ 0.33
PTPN11-201ENST00000351677 SF3B3Q15393 1217 aaKnown RBP17.1■□□□□ 0.33
PTPN11-201ENST00000351677 LMBRD2Q68DH5 695 aaPredicted RBP17.1■□□□□ 0.33
PTPN11-201ENST00000351677 HAUS6Q7Z4H7 955 aa17.1■□□□□ 0.33
PTPN11-201ENST00000351677 FAM167AQ96KS9 214 aa17.1■□□□□ 0.33
PTPN11-201ENST00000351677 KLC2Q9H0B6 622 aa17.1■□□□□ 0.33
PTPN11-201ENST00000351677 MAPK13O15264 365 aa17.1■□□□□ 0.33
PTPN11-201ENST00000351677 CALB1P05937 261 aa17.1■□□□□ 0.33
PTPN11-201ENST00000351677 RNF139Q8WU17 664 aa17.1■□□□□ 0.33
PTPN11-201ENST00000351677 PPWD1Q96BP3 646 aaKnown RBP17.1■□□□□ 0.33
PTPN11-201ENST00000351677 HPS5Q9UPZ3 1129 aa17.1■□□□□ 0.33
PTPN11-201ENST00000351677 C1orf54Q8WWF1 131 aa17.1■□□□□ 0.33
PTPN11-201ENST00000351677 SPDL1Q96EA4 605 aa17.1■□□□□ 0.33
PTPN11-201ENST00000351677 LRFN2Q9ULH4 789 aa17.1■□□□□ 0.33
PTPN11-201ENST00000351677 ABCA9Q8IUA7 1624 aa17.1■□□□□ 0.33
PTPN11-201ENST00000351677 F5H423 210 aaPredicted RBP17.1■□□□□ 0.33
PTPN11-201ENST00000351677 RFC1P35251 1148 aaPredicted RBP17.1■□□□□ 0.33
PTPN11-201ENST00000351677 PSPC1Q8WXF1 523 aaKnown RBP17.1■□□□□ 0.33
PTPN11-201ENST00000351677 AMACRQ9UHK6 382 aa17.1■□□□□ 0.33
PTPN11-201ENST00000351677 MYMKA6NI61 221 aa17.09■□□□□ 0.33
PTPN11-201ENST00000351677 STXBP3O00186 592 aa17.09■□□□□ 0.33
PTPN11-201ENST00000351677 SRGNP10124 158 aa17.09■□□□□ 0.33
PTPN11-201ENST00000351677 CCDC137Q6PK04 289 aaKnown RBP17.09■□□□□ 0.33
PTPN11-201ENST00000351677 PDZD8Q8NEN9 1154 aa17.09■□□□□ 0.33
PTPN11-201ENST00000351677 GOLGA8CPA6NN73 597 aa17.09■□□□□ 0.33
PTPN11-201ENST00000351677 MYL3P08590 195 aa17.09■□□□□ 0.33
PTPN11-201ENST00000351677 SEMA3FQ13275 785 aa17.09■□□□□ 0.33
PTPN11-201ENST00000351677 EPM2AIP1Q7L775 607 aaPredicted RBP17.09■□□□□ 0.33
PTPN11-201ENST00000351677 RFFLQ8WZ73 363 aa17.09■□□□□ 0.33
PTPN11-201ENST00000351677 C7orf25Q9BPX7 421 aa17.09■□□□□ 0.33
PTPN11-201ENST00000351677 MORC2Q9Y6X9 1032 aaPredicted RBP17.09■□□□□ 0.33
PTPN11-201ENST00000351677 BIRC2Q13490 618 aa17.09■□□□□ 0.33
PTPN11-201ENST00000351677 PDE1CQ14123 709 aaPredicted RBP17.09■□□□□ 0.33
PTPN11-201ENST00000351677 ARL13BQ3SXY8 428 aa17.09■□□□□ 0.33
PTPN11-201ENST00000351677 CEP55Q53EZ4 464 aa17.09■□□□□ 0.33
PTPN11-201ENST00000351677 GIMAP8Q8ND71 665 aaPredicted RBP17.09■□□□□ 0.33
PTPN11-201ENST00000351677 DDX27Q96GQ7 796 aaKnown RBP17.09■□□□□ 0.33
PTPN11-201ENST00000351677 NUDCD1Q96RS6 583 aa17.09■□□□□ 0.33
PTPN11-201ENST00000351677 ASNSD1Q9NWL6 643 aa17.09■□□□□ 0.33
PTPN11-201ENST00000351677 M0QYV0 167 aa17.09■□□□□ 0.33
PTPN11-201ENST00000351677 RHOBTB3O94955 611 aa17.09■□□□□ 0.33
PTPN11-201ENST00000351677 TTC4O95801 387 aa17.09■□□□□ 0.33
PTPN11-201ENST00000351677 EPHA7Q15375 998 aa17.09■□□□□ 0.33
PTPN11-201ENST00000351677 FBXO40Q9UH90 709 aa17.09■□□□□ 0.33
PTPN11-201ENST00000351677 PPP1R9AQ9ULJ8 1098 aa17.09■□□□□ 0.33
PTPN11-201ENST00000351677 INPP5FQ9Y2H2 1132 aa17.09■□□□□ 0.33
PTPN11-201ENST00000351677 CFLARO15519 480 aa17.09■□□□□ 0.33
PTPN11-201ENST00000351677 CYP26A1O43174 497 aa17.09■□□□□ 0.33
PTPN11-201ENST00000351677 PHKA2P46019 1235 aa17.09■□□□□ 0.33
PTPN11-201ENST00000351677 TRIM59Q8IWR1 403 aa17.09■□□□□ 0.33
PTPN11-201ENST00000351677 TC2NQ8N9U0 490 aa17.09■□□□□ 0.33
PTPN11-201ENST00000351677 PDXKO00764 312 aa17.08■□□□□ 0.33
PTPN11-201ENST00000351677 COPEO14579 308 aa17.08■□□□□ 0.33
PTPN11-201ENST00000351677 CHRNA5P30532 468 aa17.08■□□□□ 0.33
PTPN11-201ENST00000351677 CHRNA3P32297 505 aa17.08■□□□□ 0.33
PTPN11-201ENST00000351677 PPP2R2AP63151 447 aa17.08■□□□□ 0.33
PTPN11-201ENST00000351677 COG7P83436 770 aa17.08■□□□□ 0.33
PTPN11-201ENST00000351677 IL1RL1Q01638 556 aa17.08■□□□□ 0.33
PTPN11-201ENST00000351677 LINC00116Q8NCU8 138 aa17.08■□□□□ 0.33
PTPN11-201ENST00000351677 ZNF526Q8TF50 670 aaPredicted RBP17.08■□□□□ 0.33
PTPN11-201ENST00000351677 TMEM60Q9H2L4 133 aa17.08■□□□□ 0.33
PTPN11-201ENST00000351677 RBAKQ9NYW8 714 aaPredicted RBP17.08■□□□□ 0.33
PTPN11-201ENST00000351677 SNX12Q9UMY4 172 aa17.08■□□□□ 0.33
PTPN11-201ENST00000351677 MYO1CO00159 1063 aa17.08■□□□□ 0.33
PTPN11-201ENST00000351677 TMPRSS15P98073 1019 aa17.08■□□□□ 0.33
PTPN11-201ENST00000351677 E2F4Q16254 413 aa17.08■□□□□ 0.33
PTPN11-201ENST00000351677 ATG16L1Q676U5 607 aa17.08■□□□□ 0.33
PTPN11-201ENST00000351677 RAD9BQ6WBX8 426 aa17.08■□□□□ 0.33
PTPN11-201ENST00000351677 GPD1LQ8N335 351 aa17.08■□□□□ 0.33
PTPN11-201ENST00000351677 REEP2Q9BRK0 252 aa17.08■□□□□ 0.33
PTPN11-201ENST00000351677 FBXL5Q9UKA1 691 aa17.08■□□□□ 0.33
PTPN11-201ENST00000351677 BAG5Q9UL15 447 aa17.08■□□□□ 0.33
PTPN11-201ENST00000351677 YWHABP31946 246 aaKnown RBP17.08■□□□□ 0.32
PTPN11-201ENST00000351677 PSMC1P62191 440 aaKnown RBP17.08■□□□□ 0.32
PTPN11-201ENST00000351677 LRRC43Q8N309 656 aa17.08■□□□□ 0.32
PTPN11-201ENST00000351677 AGPAT1Q99943 283 aa17.08■□□□□ 0.32
PTPN11-201ENST00000351677 GOLGA8QA0A0J9YX86 632 aa17.08■□□□□ 0.32
PTPN11-201ENST00000351677 TYW5A2RUC4 315 aaKnown RBP17.08■□□□□ 0.32
PTPN11-201ENST00000351677 GOLGA8OA6NCC3 632 aa17.08■□□□□ 0.32
PTPN11-201ENST00000351677 GOLGA8NF8WBI6 632 aa17.08■□□□□ 0.32
PTPN11-201ENST00000351677 KRT37O76014 449 aa17.08■□□□□ 0.32
PTPN11-201ENST00000351677 TBXAS1P24557 533 aaPredicted RBP17.08■□□□□ 0.32
PTPN11-201ENST00000351677 KLK7P49862 253 aa17.08■□□□□ 0.32
PTPN11-201ENST00000351677 GPS1Q13098 491 aa17.08■□□□□ 0.32
PTPN11-201ENST00000351677 RPAP3Q9H6T3 665 aaPredicted RBP17.08■□□□□ 0.32
PTPN11-201ENST00000351677 CNTNAP5Q8WYK1 1306 aa17.08■□□□□ 0.32
PTPN11-201ENST00000351677 TAF11Q15544 211 aa17.08■□□□□ 0.32
PTPN11-201ENST00000351677 RASGRP2Q7LDG7 609 aa17.08■□□□□ 0.32
PTPN11-201ENST00000351677 SDCCAG3Q96C92 435 aa17.08■□□□□ 0.32
PTPN11-201ENST00000351677 WNT8AQ9H1J5 351 aa17.08■□□□□ 0.32
PTPN11-201ENST00000351677 KIF9Q9HAQ2 790 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms