RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 CCDC65Q8IXS2 484 aa11.44□□□□□ -0.58
CAPN3-203ENST00000349748 RSPH1Q8WYR4 309 aa11.44□□□□□ -0.58
CAPN3-203ENST00000349748 CNOT6LQ96LI5 555 aaKnown RBP11.44□□□□□ -0.58
CAPN3-203ENST00000349748 UBA5Q9GZZ9 404 aa11.44□□□□□ -0.58
CAPN3-203ENST00000349748 SEMA4AQ9H3S1 761 aa11.44□□□□□ -0.58
CAPN3-203ENST00000349748 COPRSQ9NQ92 184 aa11.44□□□□□ -0.58
CAPN3-203ENST00000349748 CROTQ9UKG9 612 aa11.44□□□□□ -0.58
CAPN3-203ENST00000349748 ZNF330Q9Y3S2 320 aaPredicted RBP11.44□□□□□ -0.58
CAPN3-203ENST00000349748 DYTNA2CJ06 578 aa11.43□□□□□ -0.58
CAPN3-203ENST00000349748 MARK3P27448 753 aa11.43□□□□□ -0.58
CAPN3-203ENST00000349748 SMARCA1P28370 1054 aa11.43□□□□□ -0.58
CAPN3-203ENST00000349748 RXRBP28702 533 aa11.43□□□□□ -0.58
CAPN3-203ENST00000349748 COPB2P35606 906 aa11.43□□□□□ -0.58
CAPN3-203ENST00000349748 PLTPP55058 493 aa11.43□□□□□ -0.58
CAPN3-203ENST00000349748 MECOMQ03112 1051 aa11.43□□□□□ -0.58
CAPN3-203ENST00000349748 GSTA3Q16772 222 aa11.43□□□□□ -0.58
CAPN3-203ENST00000349748 PDXDC2PQ6P474 469 aa11.43□□□□□ -0.58
CAPN3-203ENST00000349748 IQCF2Q8IXL9 164 aa11.43□□□□□ -0.58
CAPN3-203ENST00000349748 LRRC43Q8N309 656 aa11.43□□□□□ -0.58
CAPN3-203ENST00000349748 MARCH10Q8NA82 808 aaPredicted RBP11.43□□□□□ -0.58
CAPN3-203ENST00000349748 GAB3Q8WWW8 586 aa11.43□□□□□ -0.58
CAPN3-203ENST00000349748 OLFM3Q96PB7 478 aa11.43□□□□□ -0.58
CAPN3-203ENST00000349748 MIPEPQ99797 713 aa11.43□□□□□ -0.58
CAPN3-203ENST00000349748 ASAP1Q9ULH1 1129 aa11.43□□□□□ -0.58
CAPN3-203ENST00000349748 TBC1D30Q9Y2I9 924 aa11.43□□□□□ -0.58
CAPN3-203ENST00000349748 UTP11Q9Y3A2 253 aaKnown RBP11.43□□□□□ -0.58
CAPN3-203ENST00000349748 TRIM75PA6NK02 468 aa11.43□□□□□ -0.58
CAPN3-203ENST00000349748 RGL2O15211 777 aa11.43□□□□□ -0.58
CAPN3-203ENST00000349748 GTPBP6O43824 516 aaPredicted RBP11.43□□□□□ -0.58
CAPN3-203ENST00000349748 FGFR4P22455 802 aa11.43□□□□□ -0.58
CAPN3-203ENST00000349748 HNRNPH3P31942 346 aaKnown RBP11.43□□□□□ -0.58
CAPN3-203ENST00000349748 RXRGP48443 463 aa11.43□□□□□ -0.58
CAPN3-203ENST00000349748 VPS41P49754 854 aa11.43□□□□□ -0.58
CAPN3-203ENST00000349748 MPP2Q14168 576 aa11.43□□□□□ -0.58
CAPN3-203ENST00000349748 ZNF174Q15697 407 aa11.43□□□□□ -0.58
CAPN3-203ENST00000349748 IZUMO2Q6UXV1 221 aa11.43□□□□□ -0.58
CAPN3-203ENST00000349748 SDR16C5Q8N3Y7 309 aa11.43□□□□□ -0.58
CAPN3-203ENST00000349748 RBM46Q8TBY0 533 aaKnown RBP11.43□□□□□ -0.58
CAPN3-203ENST00000349748 SNX27Q96L92 541 aa11.43□□□□□ -0.58
CAPN3-203ENST00000349748 DUSP9Q99956 384 aaKnown RBP11.43□□□□□ -0.58
CAPN3-203ENST00000349748 TCHPQ9BT92 498 aa11.43□□□□□ -0.58
CAPN3-203ENST00000349748 SLIT2O94813 1529 aa11.43□□□□□ -0.58
CAPN3-203ENST00000349748 A0A1W2PQJ5 194 aa11.43□□□□□ -0.58
CAPN3-203ENST00000349748 ATP5J2-PTCD1G3V325 749 aa11.43□□□□□ -0.58
CAPN3-203ENST00000349748 RNF113AO15541 343 aaKnown RBP11.43□□□□□ -0.58
CAPN3-203ENST00000349748 AUHQ13825 339 aaKnown RBP11.43□□□□□ -0.58
CAPN3-203ENST00000349748 CLPPQ16740 277 aaPredicted RBP11.43□□□□□ -0.58
CAPN3-203ENST00000349748 ASTE1Q2TB18 679 aaPredicted RBP11.43□□□□□ -0.58
CAPN3-203ENST00000349748 USH1GQ495M9 461 aa11.43□□□□□ -0.58
CAPN3-203ENST00000349748 TMEM259Q4ZIN3 620 aa11.43□□□□□ -0.58
CAPN3-203ENST00000349748 C6orf118Q5T5N4 469 aa11.43□□□□□ -0.58
CAPN3-203ENST00000349748 GET4Q7L5D6 327 aaPredicted RBP11.43□□□□□ -0.58
CAPN3-203ENST00000349748 ADAT2Q7Z6V5 191 aaKnown RBP11.43□□□□□ -0.58
CAPN3-203ENST00000349748 COL23A1Q86Y22 540 aaPredicted RBP11.43□□□□□ -0.58
CAPN3-203ENST00000349748 ST13P4Q8IZP2 240 aaPredicted RBP11.43□□□□□ -0.58
CAPN3-203ENST00000349748 NME8Q8N427 588 aa11.43□□□□□ -0.58
CAPN3-203ENST00000349748 OGFOD1Q8N543 542 aa11.43□□□□□ -0.58
CAPN3-203ENST00000349748 INPP5DQ92835 1189 aa11.43□□□□□ -0.58
CAPN3-203ENST00000349748 GJD4Q96KN9 370 aaPredicted RBP11.43□□□□□ -0.58
CAPN3-203ENST00000349748 LRRC37BQ96QE4 947 aa11.43□□□□□ -0.58
CAPN3-203ENST00000349748 METTL22Q9BUU2 404 aaPredicted RBP11.43□□□□□ -0.58
CAPN3-203ENST00000349748 RTCBQ9Y3I0 505 aaKnown RBP11.43□□□□□ -0.58
CAPN3-203ENST00000349748 COL14A1Q05707 1796 aaKnown RBP11.42□□□□□ -0.58
CAPN3-203ENST00000349748 PDE5AO76074 875 aa11.42□□□□□ -0.58
CAPN3-203ENST00000349748 PGM3O95394 542 aa11.42□□□□□ -0.58
CAPN3-203ENST00000349748 PSMG1O95456 288 aa11.42□□□□□ -0.58
CAPN3-203ENST00000349748 NAB2Q15742 525 aa11.42□□□□□ -0.58
CAPN3-203ENST00000349748 TTI2Q6NXR4 508 aa11.42□□□□□ -0.58
CAPN3-203ENST00000349748 ISLR2Q6UXK2 745 aa11.42□□□□□ -0.58
CAPN3-203ENST00000349748 SH3TC2Q8TF17 1288 aa11.42□□□□□ -0.58
CAPN3-203ENST00000349748 PIGBQ92521 554 aa11.42□□□□□ -0.58
CAPN3-203ENST00000349748 NAP1L3Q99457 506 aaPredicted RBP11.42□□□□□ -0.58
CAPN3-203ENST00000349748 FOXP1Q9H334 677 aaPredicted RBP11.42□□□□□ -0.58
CAPN3-203ENST00000349748 TRPV5Q9NQA5 729 aa11.42□□□□□ -0.58
CAPN3-203ENST00000349748 NR2E1Q9Y466 385 aa11.42□□□□□ -0.58
CAPN3-203ENST00000349748 CCDC160A6NGH7 325 aa11.42□□□□□ -0.58
CAPN3-203ENST00000349748 PGRMC1O00264 195 aaKnown RBP11.42□□□□□ -0.58
CAPN3-203ENST00000349748 ZNF213O14771 459 aa11.42□□□□□ -0.58
CAPN3-203ENST00000349748 KCNQ2O43526 872 aa11.42□□□□□ -0.58
CAPN3-203ENST00000349748 ALDH2P05091 517 aa11.42□□□□□ -0.58
CAPN3-203ENST00000349748 PDGFRBP09619 1106 aa11.42□□□□□ -0.58
CAPN3-203ENST00000349748 HARSP12081 509 aaKnown RBP11.42□□□□□ -0.58
CAPN3-203ENST00000349748 RASSF2P50749 326 aa11.42□□□□□ -0.58
CAPN3-203ENST00000349748 POLGP54098 1239 aaPredicted RBP11.42□□□□□ -0.58
CAPN3-203ENST00000349748 CYP4A11Q02928 519 aa11.42□□□□□ -0.58
CAPN3-203ENST00000349748 CYLC2Q14093 348 aaPredicted RBP11.42□□□□□ -0.58
CAPN3-203ENST00000349748 KCTD21Q4G0X4 260 aa11.42□□□□□ -0.58
CAPN3-203ENST00000349748 VSTM1Q6UX27 236 aa11.42□□□□□ -0.58
CAPN3-203ENST00000349748 LRP10Q7Z4F1 713 aa11.42□□□□□ -0.58
CAPN3-203ENST00000349748 DZIP1Q86YF9 867 aaKnown RBP11.42□□□□□ -0.58
CAPN3-203ENST00000349748 DQX1Q8TE96 717 aaKnown RBP11.42□□□□□ -0.58
CAPN3-203ENST00000349748 USP33Q8TEY7 942 aa11.42□□□□□ -0.58
CAPN3-203ENST00000349748 CKAP2Q8WWK9 683 aa11.42□□□□□ -0.58
CAPN3-203ENST00000349748 LUC7LQ9NQ29 371 aaKnown RBP11.42□□□□□ -0.58
CAPN3-203ENST00000349748 RGS17Q9UGC6 210 aaPredicted RBP11.42□□□□□ -0.58
CAPN3-203ENST00000349748 DOLKQ9UPQ8 538 aa11.42□□□□□ -0.58
CAPN3-203ENST00000349748 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.41□□□□□ -0.58
CAPN3-203ENST00000349748 RASGRF2O14827 1237 aa11.41□□□□□ -0.58
CAPN3-203ENST00000349748 ATP5HO75947 161 aa11.41□□□□□ -0.58
CAPN3-203ENST00000349748 SH3BGRP55822 239 aaPredicted RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms