RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 KIF3CO14782 793 aa6.44□□□□□ -1.38
RFC1-201ENST00000349703 APBA3O96018 575 aa6.44□□□□□ -1.38
RFC1-201ENST00000349703 LSP1P33241 339 aa6.44□□□□□ -1.38
RFC1-201ENST00000349703 ARHGAP4P98171 946 aa6.44□□□□□ -1.38
RFC1-201ENST00000349703 PPP2R5BQ15173 497 aa6.44□□□□□ -1.38
RFC1-201ENST00000349703 IMMTQ16891 758 aaKnown RBP6.44□□□□□ -1.38
RFC1-201ENST00000349703 TSPYL6Q8N831 410 aa6.44□□□□□ -1.38
RFC1-201ENST00000349703 CCHCR1Q8TD31 782 aa6.44□□□□□ -1.38
RFC1-201ENST00000349703 HVCN1Q96D96 273 aa6.44□□□□□ -1.38
RFC1-201ENST00000349703 CNPPD1Q9BV87 410 aa6.44□□□□□ -1.38
RFC1-201ENST00000349703 SMG9Q9H0W8 520 aaKnown RBP6.44□□□□□ -1.38
RFC1-201ENST00000349703 ECHDC1Q9NTX5 307 aa6.44□□□□□ -1.38
RFC1-201ENST00000349703 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.44□□□□□ -1.38
RFC1-201ENST00000349703 GPATCH2Q9NW75 528 aa6.44□□□□□ -1.38
RFC1-201ENST00000349703 ZNF212Q9UDV6 495 aa6.44□□□□□ -1.38
RFC1-201ENST00000349703 A0A087WUV0 522 aaPredicted RBP6.43□□□□□ -1.38
RFC1-201ENST00000349703 ANKRD34BA5PLL1 514 aa6.43□□□□□ -1.38
RFC1-201ENST00000349703 GPR37O15354 613 aa6.43□□□□□ -1.38
RFC1-201ENST00000349703 CAPN5O15484 640 aaPredicted RBP6.43□□□□□ -1.38
RFC1-201ENST00000349703 THEGLP0DJG4 465 aa6.43□□□□□ -1.38
RFC1-201ENST00000349703 TACR1P25103 407 aa6.43□□□□□ -1.38
RFC1-201ENST00000349703 ARL4AP40617 200 aa6.43□□□□□ -1.38
RFC1-201ENST00000349703 NPTX2P47972 431 aa6.43□□□□□ -1.38
RFC1-201ENST00000349703 STAT4Q14765 748 aa6.43□□□□□ -1.38
RFC1-201ENST00000349703 TNIP1Q15025 636 aa6.43□□□□□ -1.38
RFC1-201ENST00000349703 SIRT2Q8IXJ6 389 aa6.43□□□□□ -1.38
RFC1-201ENST00000349703 SPARTQ8N0X7 666 aa6.43□□□□□ -1.38
RFC1-201ENST00000349703 TRIML2Q8N7C3 387 aa6.43□□□□□ -1.38
RFC1-201ENST00000349703 LSM14AQ8ND56 463 aaKnown RBP6.43□□□□□ -1.38
RFC1-201ENST00000349703 GCDHQ92947 438 aaPredicted RBP6.43□□□□□ -1.38
RFC1-201ENST00000349703 CTAGE9A4FU28 777 aa6.43□□□□□ -1.38
RFC1-201ENST00000349703 GOLGA6L10A6NI86 522 aa6.43□□□□□ -1.38
RFC1-201ENST00000349703 ATXN7O15265 892 aaPredicted RBP6.43□□□□□ -1.38
RFC1-201ENST00000349703 DDX58O95786 925 aaKnown RBP6.43□□□□□ -1.38
RFC1-201ENST00000349703 FAM153BP0C7A2 387 aa6.43□□□□□ -1.38
RFC1-201ENST00000349703 ASPAP45381 313 aa6.43□□□□□ -1.38
RFC1-201ENST00000349703 NAA25Q14CX7 972 aa6.43□□□□□ -1.38
RFC1-201ENST00000349703 RCN1Q15293 331 aa6.43□□□□□ -1.38
RFC1-201ENST00000349703 TUSC1Q2TAM9 212 aa6.43□□□□□ -1.38
RFC1-201ENST00000349703 RC3H1Q5TC82 1133 aaKnown RBP6.43□□□□□ -1.38
RFC1-201ENST00000349703 C6orf163Q5TEZ5 329 aa6.43□□□□□ -1.38
RFC1-201ENST00000349703 BICRALQ6AI39 1079 aa6.43□□□□□ -1.38
RFC1-201ENST00000349703 ZNF746Q6NUN9 644 aaPredicted RBP6.43□□□□□ -1.38
RFC1-201ENST00000349703 CCDC50Q8IVM0 306 aa6.43□□□□□ -1.38
RFC1-201ENST00000349703 DBNDD2Q9BQY9 259 aa6.43□□□□□ -1.38
RFC1-201ENST00000349703 PIMREGQ9BSJ6 248 aa6.43□□□□□ -1.38
RFC1-201ENST00000349703 CDK19Q9BWU1 502 aa6.43□□□□□ -1.38
RFC1-201ENST00000349703 NDEL1Q9GZM8 345 aa6.43□□□□□ -1.38
RFC1-201ENST00000349703 DRC3Q9H069 523 aa6.43□□□□□ -1.38
RFC1-201ENST00000349703 SEC63Q9UGP8 760 aaKnown RBP6.43□□□□□ -1.38
RFC1-201ENST00000349703 NRBP1Q9UHY1 535 aa6.43□□□□□ -1.38
RFC1-201ENST00000349703 PCDHA8Q9Y5H6 950 aa6.43□□□□□ -1.38
RFC1-201ENST00000349703 USP16Q9Y5T5 823 aa6.43□□□□□ -1.38
RFC1-201ENST00000349703 POMT1Q9Y6A1 747 aa6.43□□□□□ -1.38
RFC1-201ENST00000349703 CEP152O94986 1710 aa6.43□□□□□ -1.38
RFC1-201ENST00000349703 A0A1W2PP64 1363 aa6.43□□□□□ -1.38
RFC1-201ENST00000349703 CCDC151A5D8V7 595 aa6.43□□□□□ -1.38
RFC1-201ENST00000349703 METTL12A8MUP2 240 aa6.43□□□□□ -1.38
RFC1-201ENST00000349703 TULP2O00295 520 aa6.43□□□□□ -1.38
RFC1-201ENST00000349703 SUSD5O60279 629 aa6.43□□□□□ -1.38
RFC1-201ENST00000349703 KITP10721 976 aa6.43□□□□□ -1.38
RFC1-201ENST00000349703 C1orf127Q8N9H9 656 aa6.43□□□□□ -1.38
RFC1-201ENST00000349703 RAB24Q969Q5 203 aa6.43□□□□□ -1.38
RFC1-201ENST00000349703 RMDN3Q96TC7 470 aa6.43□□□□□ -1.38
RFC1-201ENST00000349703 LLPHQ9BRT6 129 aaKnown RBP6.43□□□□□ -1.38
RFC1-201ENST00000349703 PACSIN1Q9BY11 444 aa6.43□□□□□ -1.38
RFC1-201ENST00000349703 ROGDIQ9GZN7 287 aa6.43□□□□□ -1.38
RFC1-201ENST00000349703 PUS7LQ9H0K6 701 aaKnown RBP6.43□□□□□ -1.38
RFC1-201ENST00000349703 CLEC4MQ9H2X3 399 aaPredicted RBP6.43□□□□□ -1.38
RFC1-201ENST00000349703 LRRC4CQ9HCJ2 640 aa6.43□□□□□ -1.38
RFC1-201ENST00000349703 AFF4Q9UHB7 1163 aaKnown RBP6.43□□□□□ -1.38
RFC1-201ENST00000349703 PALD1Q9ULE6 856 aa6.43□□□□□ -1.38
RFC1-201ENST00000349703 KLHL20Q9Y2M5 609 aa6.43□□□□□ -1.38
RFC1-201ENST00000349703 ACTL7AQ9Y615 435 aa6.43□□□□□ -1.38
RFC1-201ENST00000349703 KAT6BQ8WYB5 2073 aa6.43□□□□□ -1.38
RFC1-201ENST00000349703 A0A1W2PNR3 127 aa6.43□□□□□ -1.38
RFC1-201ENST00000349703 CAPN8A6NHC0 703 aa6.43□□□□□ -1.38
RFC1-201ENST00000349703 ADH1CP00326 375 aa6.43□□□□□ -1.38
RFC1-201ENST00000349703 SNX1Q13596 522 aa6.43□□□□□ -1.38
RFC1-201ENST00000349703 UGP2Q16851 508 aa6.43□□□□□ -1.38
RFC1-201ENST00000349703 WDR72Q3MJ13 1102 aa6.43□□□□□ -1.38
RFC1-201ENST00000349703 ANO5Q75V66 913 aa6.43□□□□□ -1.38
RFC1-201ENST00000349703 SLC6A18Q96N87 628 aa6.43□□□□□ -1.38
RFC1-201ENST00000349703 SNX25Q9H3E2 840 aa6.43□□□□□ -1.38
RFC1-201ENST00000349703 ELAC1Q9H777 363 aaKnown RBP6.43□□□□□ -1.38
RFC1-201ENST00000349703 C1orf112Q9NSG2 853 aa6.43□□□□□ -1.38
RFC1-201ENST00000349703 MARCH2Q9P0N8 246 aa6.43□□□□□ -1.38
RFC1-201ENST00000349703 MTRRQ9UBK8 725 aa6.43□□□□□ -1.38
RFC1-201ENST00000349703 SH3BGRL2Q9UJC5 107 aa6.43□□□□□ -1.38
RFC1-201ENST00000349703 PLCH2O75038 1416 aa6.43□□□□□ -1.38
RFC1-201ENST00000349703 TUBAL3A6NHL2 446 aa6.42□□□□□ -1.38
RFC1-201ENST00000349703 NPHS1O60500 1241 aa6.42□□□□□ -1.38
RFC1-201ENST00000349703 CDKL5O76039 1030 aa6.42□□□□□ -1.38
RFC1-201ENST00000349703 IRF9Q00978 393 aa6.42□□□□□ -1.38
RFC1-201ENST00000349703 NDUFAF2Q8N183 169 aa6.42□□□□□ -1.38
RFC1-201ENST00000349703 NECAB1Q8N987 351 aa6.42□□□□□ -1.38
RFC1-201ENST00000349703 FAM76AQ8TAV0 307 aa6.42□□□□□ -1.38
RFC1-201ENST00000349703 RAPGEF4Q8WZA2 1011 aa6.42□□□□□ -1.38
RFC1-201ENST00000349703 PRAM1Q96QH2 718 aa6.42□□□□□ -1.38
RFC1-201ENST00000349703 EPYCQ99645 322 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms