RNA–Protein interactions for RNA: ENST00000349038.8

PTBP1-201, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTBP1, Length 3,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-201ENST00000349038 NT5C3AQ9H0P0 336 aa16.3■□□□□ 0.2
PTBP1-201ENST00000349038 A6NHS1 94 aa16.3■□□□□ 0.2
PTBP1-201ENST00000349038 E9PMD0 336 aa16.3■□□□□ 0.2
PTBP1-201ENST00000349038 SMAPO00193 183 aa16.3■□□□□ 0.2
PTBP1-201ENST00000349038 PAEPP09466 180 aa16.3■□□□□ 0.2
PTBP1-201ENST00000349038 PLS1Q14651 629 aa16.3■□□□□ 0.2
PTBP1-201ENST00000349038 DIXDC1Q155Q3 683 aa16.3■□□□□ 0.2
PTBP1-201ENST00000349038 SBK1Q52WX2 424 aa16.3■□□□□ 0.2
PTBP1-201ENST00000349038 MDH1BQ5I0G3 518 aa16.3■□□□□ 0.2
PTBP1-201ENST00000349038 FAM26FQ5R3K3 315 aa16.3■□□□□ 0.2
PTBP1-201ENST00000349038 VPS36Q86VN1 386 aa16.3■□□□□ 0.2
PTBP1-201ENST00000349038 MFN1Q8IWA4 741 aa16.3■□□□□ 0.2
PTBP1-201ENST00000349038 SLC35G2Q8TBE7 412 aa16.3■□□□□ 0.2
PTBP1-201ENST00000349038 CNKSR1Q969H4 720 aa16.3■□□□□ 0.2
PTBP1-201ENST00000349038 UTP4Q969X6 686 aaKnown RBP16.3■□□□□ 0.2
PTBP1-201ENST00000349038 C9orf72Q96LT7 481 aa16.3■□□□□ 0.2
PTBP1-201ENST00000349038 LRRC37BQ96QE4 947 aa16.3■□□□□ 0.2
PTBP1-201ENST00000349038 MKNK1Q9BUB5 465 aa16.3■□□□□ 0.2
PTBP1-201ENST00000349038 CTTNBP2NLQ9P2B4 639 aa16.3■□□□□ 0.2
PTBP1-201ENST00000349038 KIAA1551Q9HCM1 1747 aa16.3■□□□□ 0.2
PTBP1-201ENST00000349038 SFI1A8K8P3 1242 aa16.29■□□□□ 0.2
PTBP1-201ENST00000349038 NVLO15381 856 aaKnown RBP16.29■□□□□ 0.2
PTBP1-201ENST00000349038 USP17L8P0C7I0 530 aa16.29■□□□□ 0.2
PTBP1-201ENST00000349038 CCNFP41002 786 aa16.29■□□□□ 0.2
PTBP1-201ENST00000349038 CALCOCO2Q13137 446 aa16.29■□□□□ 0.2
PTBP1-201ENST00000349038 PARP10Q53GL7 1025 aa16.29■□□□□ 0.2
PTBP1-201ENST00000349038 OLFML2BQ68BL8 750 aa16.29■□□□□ 0.2
PTBP1-201ENST00000349038 CPNE8Q86YQ8 564 aa16.29■□□□□ 0.2
PTBP1-201ENST00000349038 C1orf54Q8WWF1 131 aa16.29■□□□□ 0.2
PTBP1-201ENST00000349038 NSUN4Q96CB9 384 aaKnown RBP16.29■□□□□ 0.2
PTBP1-201ENST00000349038 BTBD6Q96KE9 485 aa16.29■□□□□ 0.2
PTBP1-201ENST00000349038 RAB3IPQ96QF0 476 aaPredicted RBP16.29■□□□□ 0.2
PTBP1-201ENST00000349038 ABCB11O95342 1321 aa16.29■□□□□ 0.2
PTBP1-201ENST00000349038 CCDC188H7C350 402 aa16.29■□□□□ 0.2
PTBP1-201ENST00000349038 MEIS1O00470 390 aa16.29■□□□□ 0.2
PTBP1-201ENST00000349038 CACNA2D1P54289 1103 aa16.29■□□□□ 0.2
PTBP1-201ENST00000349038 MGAT5Q09328 741 aa16.29■□□□□ 0.2
PTBP1-201ENST00000349038 MPP2Q14168 576 aa16.29■□□□□ 0.2
PTBP1-201ENST00000349038 GRM4Q14833 912 aa16.29■□□□□ 0.2
PTBP1-201ENST00000349038 C4orf33Q8N1A6 199 aa16.29■□□□□ 0.2
PTBP1-201ENST00000349038 TBC1D10AQ9BXI6 508 aa16.29■□□□□ 0.2
PTBP1-201ENST00000349038 MOV10L1Q9BXT6 1211 aaKnown RBP16.29■□□□□ 0.2
PTBP1-201ENST00000349038 SAP30BPQ9UHR5 308 aaKnown RBP16.29■□□□□ 0.2
PTBP1-201ENST00000349038 TCRBV7S2A1N4TA0A589 114 aa16.28■□□□□ 0.2
PTBP1-201ENST00000349038 MRPS35P82673 323 aaKnown RBP16.28■□□□□ 0.2
PTBP1-201ENST00000349038 USP17L2Q6R6M4 530 aa16.28■□□□□ 0.2
PTBP1-201ENST00000349038 ATP8B4Q8TF62 1192 aa16.28■□□□□ 0.2
PTBP1-201ENST00000349038 ATP8A2Q9NTI2 1148 aa16.28■□□□□ 0.2
PTBP1-201ENST00000349038 MYH1P12882 1939 aa16.28■□□□□ 0.2
PTBP1-201ENST00000349038 CFAP69A5D8W1 941 aa16.28■□□□□ 0.2
PTBP1-201ENST00000349038 KRT36O76013 467 aa16.28■□□□□ 0.2
PTBP1-201ENST00000349038 ZBTB16Q05516 673 aa16.28■□□□□ 0.2
PTBP1-201ENST00000349038 SEPT2Q15019 361 aa16.28■□□□□ 0.2
PTBP1-201ENST00000349038 CALCRLQ16602 461 aa16.28■□□□□ 0.2
PTBP1-201ENST00000349038 CERKLQ49MI3 558 aaPredicted RBP16.28■□□□□ 0.2
PTBP1-201ENST00000349038 KRT79Q5XKE5 535 aa16.28■□□□□ 0.2
PTBP1-201ENST00000349038 NSMFQ6X4W1 530 aa16.28■□□□□ 0.2
PTBP1-201ENST00000349038 CCDC24Q8N4L8 307 aa16.28■□□□□ 0.2
PTBP1-201ENST00000349038 STK32AQ8WU08 396 aa16.28■□□□□ 0.2
PTBP1-201ENST00000349038 MAIP1Q8WWC4 291 aa16.28■□□□□ 0.2
PTBP1-201ENST00000349038 CRNKL1Q9BZJ0 848 aaKnown RBP16.28■□□□□ 0.2
PTBP1-201ENST00000349038 BARHL2Q9NY43 387 aa16.28■□□□□ 0.2
PTBP1-201ENST00000349038 MAD2L2Q9UI95 211 aa16.28■□□□□ 0.2
PTBP1-201ENST00000349038 RASAL2Q9UJF2 1139 aa16.28■□□□□ 0.2
PTBP1-201ENST00000349038 CAPN9O14815 690 aa16.28■□□□□ 0.2
PTBP1-201ENST00000349038 THAP12O43422 761 aa16.28■□□□□ 0.2
PTBP1-201ENST00000349038 OPHN1O60890 802 aa16.28■□□□□ 0.2
PTBP1-201ENST00000349038 TPBGLP0DKB5 382 aa16.28■□□□□ 0.2
PTBP1-201ENST00000349038 UCHL3P15374 230 aa16.28■□□□□ 0.2
PTBP1-201ENST00000349038 CTTNQ14247 550 aaKnown RBP16.28■□□□□ 0.2
PTBP1-201ENST00000349038 KHDC1Q4VXA5 237 aaKnown RBP16.28■□□□□ 0.2
PTBP1-201ENST00000349038 CCDC137Q6PK04 289 aaKnown RBP16.28■□□□□ 0.2
PTBP1-201ENST00000349038 LRRC55Q6ZSA7 311 aa16.28■□□□□ 0.2
PTBP1-201ENST00000349038 DGKHQ86XP1 1220 aa16.28■□□□□ 0.2
PTBP1-201ENST00000349038 GALNT15Q8N3T1 639 aa16.28■□□□□ 0.2
PTBP1-201ENST00000349038 ACTRT1Q8TDG2 376 aa16.28■□□□□ 0.2
PTBP1-201ENST00000349038 KRT35Q92764 455 aa16.28■□□□□ 0.2
PTBP1-201ENST00000349038 KIFAP3Q92845 792 aa16.28■□□□□ 0.2
PTBP1-201ENST00000349038 COA7Q96BR5 231 aa16.28■□□□□ 0.2
PTBP1-201ENST00000349038 RBM41Q96IZ5 413 aaKnown RBP16.28■□□□□ 0.2
PTBP1-201ENST00000349038 TTC1Q99614 292 aa16.28■□□□□ 0.2
PTBP1-201ENST00000349038 DENND2DQ9H6A0 471 aaPredicted RBP16.28■□□□□ 0.2
PTBP1-201ENST00000349038 ARHGEF3Q9NR81 526 aa16.28■□□□□ 0.2
PTBP1-201ENST00000349038 IL17RBQ9NRM6 502 aa16.28■□□□□ 0.2
PTBP1-201ENST00000349038 BMP2KQ9NSY1 1161 aaPredicted RBP16.28■□□□□ 0.2
PTBP1-201ENST00000349038 USP40Q9NVE5 1235 aa16.28■□□□□ 0.2
PTBP1-201ENST00000349038 NMRK1Q9NWW6 199 aa16.28■□□□□ 0.2
PTBP1-201ENST00000349038 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.27■□□□□ 0.2
PTBP1-201ENST00000349038 ANKRD62A6NC57 917 aa16.27■□□□□ 0.2
PTBP1-201ENST00000349038 RBAK-RBAKDNI3L0D1 243 aa16.27■□□□□ 0.2
PTBP1-201ENST00000349038 PEX11AO75192 247 aa16.27■□□□□ 0.2
PTBP1-201ENST00000349038 NONOQ15233 471 aaKnown RBP eCLIP16.27■□□□□ 0.22e-7■■■□□ 18.3
PTBP1-201ENST00000349038 SNX30Q5VWJ9 437 aa16.27■□□□□ 0.2
PTBP1-201ENST00000349038 C1orf131Q8NDD1 294 aaKnown RBP16.27■□□□□ 0.2
PTBP1-201ENST00000349038 JDP2Q8WYK2 163 aa16.27■□□□□ 0.2
PTBP1-201ENST00000349038 MCUR1Q96AQ8 359 aa16.27■□□□□ 0.2
PTBP1-201ENST00000349038 FAM84BQ96KN1 310 aaPredicted RBP16.27■□□□□ 0.2
PTBP1-201ENST00000349038 MMTAG2Q9BU76 263 aaKnown RBP16.27■□□□□ 0.2
PTBP1-201ENST00000349038 BCAS3Q9H6U6 928 aa16.27■□□□□ 0.2
PTBP1-201ENST00000349038 RXFP1Q9HBX9 757 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms