RNA–Protein interactions for RNA: ENST00000347615.6

SMG7-201, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMG7, Length 5,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-201ENST00000347615 PSMD14O00487 310 aa11.21□□□□□ -0.61
SMG7-201ENST00000347615 PRELPP51888 382 aa11.21□□□□□ -0.61
SMG7-201ENST00000347615 PDIA2Q13087 525 aaKnown RBP11.21□□□□□ -0.61
SMG7-201ENST00000347615 BBOF1Q8ND07 529 aa11.21□□□□□ -0.61
SMG7-201ENST00000347615 SH3BP5O60239 455 aa11.21□□□□□ -0.61
SMG7-201ENST00000347615 GMNNO75496 209 aa11.21□□□□□ -0.61
SMG7-201ENST00000347615 TMPRSS15P98073 1019 aa11.21□□□□□ -0.61
SMG7-201ENST00000347615 RINT1Q6NUQ1 792 aa11.21□□□□□ -0.61
SMG7-201ENST00000347615 RHOT2Q8IXI1 618 aa11.21□□□□□ -0.61
SMG7-201ENST00000347615 PROM2Q8N271 834 aa11.21□□□□□ -0.61
SMG7-201ENST00000347615 GBP7Q8N8V2 638 aaPredicted RBP11.21□□□□□ -0.61
SMG7-201ENST00000347615 KCNB2Q92953 911 aa11.21□□□□□ -0.61
SMG7-201ENST00000347615 EXT2Q93063 718 aa11.21□□□□□ -0.61
SMG7-201ENST00000347615 PPWD1Q96BP3 646 aaKnown RBP11.21□□□□□ -0.61
SMG7-201ENST00000347615 HESX1Q9UBX0 185 aa11.21□□□□□ -0.61
SMG7-201ENST00000347615 ZFP69BQ9UJL9 534 aa11.21□□□□□ -0.61
SMG7-201ENST00000347615 MYBL1P10243 752 aa11.21□□□□□ -0.62
SMG7-201ENST00000347615 RFC1P35251 1148 aaPredicted RBP11.21□□□□□ -0.62
SMG7-201ENST00000347615 EPHB1P54762 984 aa11.21□□□□□ -0.62
SMG7-201ENST00000347615 KCNB1Q14721 858 aa11.21□□□□□ -0.62
SMG7-201ENST00000347615 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.21□□□□□ -0.626e-10■■■□□ 17.3
SMG7-201ENST00000347615 TTC1Q99614 292 aa11.21□□□□□ -0.62
SMG7-201ENST00000347615 TXLNGQ9NUQ3 528 aa11.21□□□□□ -0.62
SMG7-201ENST00000347615 MAD2L2Q9UI95 211 aa11.21□□□□□ -0.62
SMG7-201ENST00000347615 MAPK13O15264 365 aa11.21□□□□□ -0.62
SMG7-201ENST00000347615 GYG2O15488 501 aa11.21□□□□□ -0.62
SMG7-201ENST00000347615 ZRANB2O95218 330 aaKnown RBP eCLIP11.21□□□□□ -0.62
SMG7-201ENST00000347615 CASP4P49662 377 aa11.21□□□□□ -0.62
SMG7-201ENST00000347615 AP1ARQ63HQ0 302 aa11.21□□□□□ -0.62
SMG7-201ENST00000347615 PPP4R3CPQ6ZMV5 832 aa11.21□□□□□ -0.62
SMG7-201ENST00000347615 ERICH1Q86X53 443 aa11.21□□□□□ -0.62
SMG7-201ENST00000347615 CYFIP2Q96F07 1278 aa11.21□□□□□ -0.62
SMG7-201ENST00000347615 SEC16BQ96JE7 1060 aa11.21□□□□□ -0.62
SMG7-201ENST00000347615 PPP1R9AQ9ULJ8 1098 aa11.21□□□□□ -0.62
SMG7-201ENST00000347615 A0A087X0T9 212 aa11.2□□□□□ -0.62
SMG7-201ENST00000347615 K7ERI5 159 aa11.2□□□□□ -0.62
SMG7-201ENST00000347615 FAM228BP0C875 321 aa11.2□□□□□ -0.62
SMG7-201ENST00000347615 POLR2BP30876 1174 aaKnown RBP11.2□□□□□ -0.62
SMG7-201ENST00000347615 EVX2Q03828 476 aa11.2□□□□□ -0.62
SMG7-201ENST00000347615 CC2D2BQ6DHV5 1058 aa11.2□□□□□ -0.62
SMG7-201ENST00000347615 XXYLT1Q8NBI6 393 aa11.2□□□□□ -0.62
SMG7-201ENST00000347615 KIFC3Q9BVG8 833 aa11.2□□□□□ -0.62
SMG7-201ENST00000347615 NACA2Q9H009 215 aa11.2□□□□□ -0.62
SMG7-201ENST00000347615 NOP53Q9NZM5 478 aaKnown RBP11.2□□□□□ -0.62
SMG7-201ENST00000347615 MARCOQ9UEW3 520 aaPredicted RBP11.2□□□□□ -0.62
SMG7-201ENST00000347615 CD163L1Q9NR16 1453 aa11.2□□□□□ -0.62
SMG7-201ENST00000347615 CEMIPQ8WUJ3 1361 aa11.2□□□□□ -0.62
SMG7-201ENST00000347615 PDS5AQ29RF7 1337 aaKnown RBP11.2□□□□□ -0.62
SMG7-201ENST00000347615 ITIH6Q6UXX5 1313 aa11.2□□□□□ -0.62
SMG7-201ENST00000347615 SYNGAP1Q96PV0 1343 aa11.2□□□□□ -0.62
SMG7-201ENST00000347615 ORC4O43929 436 aa11.2□□□□□ -0.62
SMG7-201ENST00000347615 P4HA1P13674 534 aa11.2□□□□□ -0.62
SMG7-201ENST00000347615 VEGFAP15692 232 aaPredicted RBP11.2□□□□□ -0.62
SMG7-201ENST00000347615 RAD23BP54727 409 aa11.2□□□□□ -0.62
SMG7-201ENST00000347615 GRAMD1BQ3KR37 738 aa11.2□□□□□ -0.62
SMG7-201ENST00000347615 SWSAP1Q6NVH7 229 aa11.2□□□□□ -0.62
SMG7-201ENST00000347615 C1orf228Q6PIY5 440 aa11.2□□□□□ -0.62
SMG7-201ENST00000347615 RYBPQ8N488 228 aaPredicted RBP11.2□□□□□ -0.62
SMG7-201ENST00000347615 NOD1Q9Y239 953 aa11.2□□□□□ -0.62
SMG7-201ENST00000347615 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.2□□□□□ -0.62
SMG7-201ENST00000347615 FLT1P17948 1338 aa11.2□□□□□ -0.62
SMG7-201ENST00000347615 CCDC78A2IDD5 438 aa11.2□□□□□ -0.62
SMG7-201ENST00000347615 BBOX1O75936 387 aa11.2□□□□□ -0.62
SMG7-201ENST00000347615 POLD1P28340 1107 aa11.2□□□□□ -0.62
SMG7-201ENST00000347615 C4orf50Q6ZRC1 276 aa11.2□□□□□ -0.62
SMG7-201ENST00000347615 PCGF5Q86SE9 256 aa11.2□□□□□ -0.62
SMG7-201ENST00000347615 ATP6V0A1Q93050 837 aa11.2□□□□□ -0.62
SMG7-201ENST00000347615 ANKRD36BP1Q96IX9 119 aa11.2□□□□□ -0.62
SMG7-201ENST00000347615 OSBPL1AQ9BXW6 950 aa11.2□□□□□ -0.62
SMG7-201ENST00000347615 DIAPH2O60879 1101 aa11.2□□□□□ -0.62
SMG7-201ENST00000347615 CENPUQ71F23 418 aa11.2□□□□□ -0.62
SMG7-201ENST00000347615 TRAPPC11Q7Z392 1133 aa11.2□□□□□ -0.62
SMG7-201ENST00000347615 PPM1NQ8N819 430 aa11.2□□□□□ -0.62
SMG7-201ENST00000347615 RMDN3Q96TC7 470 aa11.2□□□□□ -0.62
SMG7-201ENST00000347615 SPATS2LQ9NUQ6 558 aaKnown RBP11.2□□□□□ -0.62
SMG7-201ENST00000347615 PXDNLA1KZ92 1463 aa11.2□□□□□ -0.62
SMG7-201ENST00000347615 ZNF233A6NK53 670 aa11.2□□□□□ -0.62
SMG7-201ENST00000347615 PODXLO00592 558 aa11.2□□□□□ -0.62
SMG7-201ENST00000347615 MMP10P09238 476 aa11.2□□□□□ -0.62
SMG7-201ENST00000347615 ACOT2P49753 483 aa11.2□□□□□ -0.62
SMG7-201ENST00000347615 TROAPQ12815 778 aa11.2□□□□□ -0.62
SMG7-201ENST00000347615 NTRK3Q16288 839 aa11.2□□□□□ -0.62
SMG7-201ENST00000347615 HABP4Q5JVS0 413 aaKnown RBP11.2□□□□□ -0.62
SMG7-201ENST00000347615 SEMA6BQ9H3T3 888 aa11.2□□□□□ -0.62
SMG7-201ENST00000347615 MRPL47Q9HD33 250 aaKnown RBP11.2□□□□□ -0.62
SMG7-201ENST00000347615 ENO4A6NNW6 628 aa11.19□□□□□ -0.62
SMG7-201ENST00000347615 WDR64B1ANS9 1081 aa11.19□□□□□ -0.62
SMG7-201ENST00000347615 IPO5O00410 1097 aaKnown RBP11.19□□□□□ -0.62
SMG7-201ENST00000347615 RASA1P20936 1047 aa11.19□□□□□ -0.62
SMG7-201ENST00000347615 HNRNPH1P31943 449 aaKnown RBP11.19□□□□□ -0.62
SMG7-201ENST00000347615 BPIFB4P59827 614 aa11.19□□□□□ -0.62
SMG7-201ENST00000347615 ASPHQ12797 758 aa11.19□□□□□ -0.62
SMG7-201ENST00000347615 NAALADL2Q58DX5 795 aa11.19□□□□□ -0.62
SMG7-201ENST00000347615 IZUMO3Q5VZ72 239 aa11.19□□□□□ -0.62
SMG7-201ENST00000347615 AGPAT1Q99943 283 aa11.19□□□□□ -0.62
SMG7-201ENST00000347615 TLR3O15455 904 aaKnown RBP11.19□□□□□ -0.62
SMG7-201ENST00000347615 MAP3K7O43318 606 aa11.19□□□□□ -0.62
SMG7-201ENST00000347615 KCNJ6P48051 423 aa11.19□□□□□ -0.62
SMG7-201ENST00000347615 SPARCL1Q14515 664 aa11.19□□□□□ -0.62
SMG7-201ENST00000347615 TXNRD3Q86VQ6 643 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms