RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 GPT2Q8TD30 523 aa17.87■□□□□ 0.45
RAB5C-201ENST00000346213 POLR3FQ9H1D9 316 aaPredicted RBP17.87■□□□□ 0.45
RAB5C-201ENST00000346213 ZSCAN16Q9H4T2 348 aaPredicted RBP17.87■□□□□ 0.45
RAB5C-201ENST00000346213 PIN4Q9Y237 131 aaKnown RBP17.87■□□□□ 0.45
RAB5C-201ENST00000346213 H3BQV1 296 aa17.87■□□□□ 0.45
RAB5C-201ENST00000346213 GTF2F1P35269 517 aaKnown RBP eCLIP17.87■□□□□ 0.452e-6■■■□□ 14.6
RAB5C-201ENST00000346213 DNM1Q05193 864 aaKnown RBP17.87■□□□□ 0.45
RAB5C-201ENST00000346213 MBTD1Q05BQ5 628 aa17.87■□□□□ 0.45
RAB5C-201ENST00000346213 OTUD6AQ7L8S5 288 aa17.87■□□□□ 0.45
RAB5C-201ENST00000346213 PNMA5Q96PV4 448 aa17.87■□□□□ 0.45
RAB5C-201ENST00000346213 ATP6V0A4Q9HBG4 840 aa17.87■□□□□ 0.45
RAB5C-201ENST00000346213 AGPAT5Q9NUQ2 364 aa17.87■□□□□ 0.45
RAB5C-201ENST00000346213 TYW1Q9NV66 732 aaKnown RBP17.87■□□□□ 0.45
RAB5C-201ENST00000346213 PPME1Q9Y570 386 aa17.87■□□□□ 0.45
RAB5C-201ENST00000346213 PCDHB7Q9Y5E2 793 aa17.87■□□□□ 0.45
RAB5C-201ENST00000346213 PLXNA4Q9HCM2 1894 aa17.86■□□□□ 0.45
RAB5C-201ENST00000346213 A0A0U1RQF3 1178 aa17.86■□□□□ 0.45
RAB5C-201ENST00000346213 E9PMD0 336 aa17.86■□□□□ 0.45
RAB5C-201ENST00000346213 STAG3L1P0CL83 205 aa17.86■□□□□ 0.45
RAB5C-201ENST00000346213 PHKA2P46019 1235 aa17.86■□□□□ 0.45
RAB5C-201ENST00000346213 DNM2P50570 870 aa17.86■□□□□ 0.45
RAB5C-201ENST00000346213 KCNQ1P51787 676 aa17.86■□□□□ 0.45
RAB5C-201ENST00000346213 RESTQ13127 1097 aa17.86■□□□□ 0.45
RAB5C-201ENST00000346213 KLHL23Q8NBE8 558 aa17.86■□□□□ 0.45
RAB5C-201ENST00000346213 RNF169Q8NCN4 708 aa17.86■□□□□ 0.45
RAB5C-201ENST00000346213 HELQQ8TDG4 1101 aa17.86■□□□□ 0.45
RAB5C-201ENST00000346213 MRPL38Q96DV4 380 aaKnown RBP17.86■□□□□ 0.45
RAB5C-201ENST00000346213 CPB2Q96IY4 423 aa17.86■□□□□ 0.45
RAB5C-201ENST00000346213 ELAC1Q9H777 363 aaKnown RBP17.86■□□□□ 0.45
RAB5C-201ENST00000346213 LRWD1Q9UFC0 647 aa17.86■□□□□ 0.45
RAB5C-201ENST00000346213 DBR1Q9UK59 544 aaKnown RBP17.86■□□□□ 0.45
RAB5C-201ENST00000346213 PLAGL2Q9UPG8 496 aa17.86■□□□□ 0.45
RAB5C-201ENST00000346213 TSPAN1O60635 241 aa17.85■□□□□ 0.45
RAB5C-201ENST00000346213 DGAT1O75907 488 aa17.85■□□□□ 0.45
RAB5C-201ENST00000346213 NCLP19338 710 aaKnown RBP17.85■□□□□ 0.45
RAB5C-201ENST00000346213 CCT6AP40227 531 aaKnown RBP17.85■□□□□ 0.45
RAB5C-201ENST00000346213 PTENP60484 403 aa17.85■□□□□ 0.45
RAB5C-201ENST00000346213 TCEAL5Q5H9L2 206 aa17.85■□□□□ 0.45
RAB5C-201ENST00000346213 CATSPER4Q7RTX7 472 aa17.85■□□□□ 0.45
RAB5C-201ENST00000346213 CDR2LQ86X02 465 aaPredicted RBP17.85■□□□□ 0.45
RAB5C-201ENST00000346213 SPPL3Q8TCT6 385 aa17.85■□□□□ 0.45
RAB5C-201ENST00000346213 SNX29Q8TEQ0 813 aa17.85■□□□□ 0.45
RAB5C-201ENST00000346213 KIFC3Q9BVG8 833 aa17.85■□□□□ 0.45
RAB5C-201ENST00000346213 EIF2AQ9BY44 585 aaKnown RBP17.85■□□□□ 0.45
RAB5C-201ENST00000346213 GDPD2Q9HCC8 539 aa17.85■□□□□ 0.45
RAB5C-201ENST00000346213 DDX19AQ9NUU7 478 aaKnown RBP17.85■□□□□ 0.45
RAB5C-201ENST00000346213 LRFN2Q9ULH4 789 aa17.85■□□□□ 0.45
RAB5C-201ENST00000346213 KIAA1024Q9UPX6 916 aa17.85■□□□□ 0.45
RAB5C-201ENST00000346213 C5orf42Q9H799 3197 aa17.85■□□□□ 0.45
RAB5C-201ENST00000346213 GTPBP6O43824 516 aaPredicted RBP17.84■□□□□ 0.45
RAB5C-201ENST00000346213 KRT85P78386 507 aa17.84■□□□□ 0.45
RAB5C-201ENST00000346213 RILPL1Q5EBL4 403 aa17.84■□□□□ 0.45
RAB5C-201ENST00000346213 ADGRD2Q7Z7M1 963 aa17.84■□□□□ 0.45
RAB5C-201ENST00000346213 TMEM173Q86WV6 379 aaPredicted RBP17.84■□□□□ 0.45
RAB5C-201ENST00000346213 IFNLR1Q8IU57 520 aaPredicted RBP17.84■□□□□ 0.45
RAB5C-201ENST00000346213 DAW1Q8N136 415 aa17.84■□□□□ 0.45
RAB5C-201ENST00000346213 SAMD11Q96NU1 681 aa17.84■□□□□ 0.45
RAB5C-201ENST00000346213 JPH2Q9BR39 696 aaPredicted RBP17.84■□□□□ 0.45
RAB5C-201ENST00000346213 TRAIPQ9BWF2 469 aa17.84■□□□□ 0.45
RAB5C-201ENST00000346213 RNF39Q9H2S5 420 aa17.84■□□□□ 0.45
RAB5C-201ENST00000346213 THEGQ9P2T0 379 aa17.84■□□□□ 0.45
RAB5C-201ENST00000346213 MYO7AQ13402 2215 aa17.84■□□□□ 0.45
RAB5C-201ENST00000346213 FSD2A1L4K1 749 aa17.83■□□□□ 0.45
RAB5C-201ENST00000346213 SFPQP23246 707 aaKnown RBP eCLIP17.83■□□□□ 0.45
RAB5C-201ENST00000346213 PRPHP41219 470 aa17.83■□□□□ 0.45
RAB5C-201ENST00000346213 PADI6Q6TGC4 694 aa17.83■□□□□ 0.45
RAB5C-201ENST00000346213 AGMOQ6ZNB7 445 aa17.83■□□□□ 0.45
RAB5C-201ENST00000346213 COLGALT1Q8NBJ5 622 aa17.83■□□□□ 0.45
RAB5C-201ENST00000346213 SMG8Q8ND04 991 aaKnown RBP17.83■□□□□ 0.45
RAB5C-201ENST00000346213 BCL7CQ8WUZ0 217 aaPredicted RBP17.83■□□□□ 0.45
RAB5C-201ENST00000346213 RUSC1Q9BVN2 902 aa17.83■□□□□ 0.45
RAB5C-201ENST00000346213 BHMT2Q9H2M3 363 aa17.83■□□□□ 0.45
RAB5C-201ENST00000346213 FAM105AQ9NUU6 356 aa17.83■□□□□ 0.45
RAB5C-201ENST00000346213 GAS2O43903 313 aaKnown RBP17.83■□□□□ 0.44
RAB5C-201ENST00000346213 XRCC6P12956 609 aaKnown RBP eCLIP17.83■□□□□ 0.44
RAB5C-201ENST00000346213 MAPK7Q13164 816 aa17.83■□□□□ 0.44
RAB5C-201ENST00000346213 PDIA5Q14554 519 aa17.83■□□□□ 0.44
RAB5C-201ENST00000346213 CAVIN1Q6NZI2 390 aaKnown RBP17.83■□□□□ 0.44
RAB5C-201ENST00000346213 SRGAP1Q7Z6B7 1085 aa17.83■□□□□ 0.44
RAB5C-201ENST00000346213 ZNF710Q8N1W2 664 aa17.83■□□□□ 0.44
RAB5C-201ENST00000346213 NECAB3Q96P71 396 aaPredicted RBP17.83■□□□□ 0.44
RAB5C-201ENST00000346213 NACC1Q96RE7 527 aa17.83■□□□□ 0.44
RAB5C-201ENST00000346213 PLIN2Q99541 437 aa17.83■□□□□ 0.44
RAB5C-201ENST00000346213 TMEM117Q9H0C3 514 aa17.83■□□□□ 0.44
RAB5C-201ENST00000346213 CXCL16Q9H2A7 254 aa17.83■□□□□ 0.44
RAB5C-201ENST00000346213 LMCD1Q9NZU5 365 aa17.83■□□□□ 0.44
RAB5C-201ENST00000346213 HES2Q9Y543 173 aa17.83■□□□□ 0.44
RAB5C-201ENST00000346213 CLIC4Q9Y696 253 aa17.83■□□□□ 0.44
RAB5C-201ENST00000346213 CUL9Q8IWT3 2517 aa17.82■□□□□ 0.44
RAB5C-201ENST00000346213 VWA3AA6NCI4 1184 aa17.82■□□□□ 0.44
RAB5C-201ENST00000346213 GADD45BO75293 160 aaPredicted RBP17.82■□□□□ 0.44
RAB5C-201ENST00000346213 ZSCAN20P17040 1043 aaPredicted RBP17.82■□□□□ 0.44
RAB5C-201ENST00000346213 CYP11B2P19099 503 aa17.82■□□□□ 0.44
RAB5C-201ENST00000346213 UBE2HP62256 183 aa17.82■□□□□ 0.44
RAB5C-201ENST00000346213 SKIV2LQ15477 1246 aaKnown RBP17.82■□□□□ 0.44
RAB5C-201ENST00000346213 ODR4Q5SWX8 454 aa17.82■□□□□ 0.44
RAB5C-201ENST00000346213 CDCA2Q69YH5 1023 aaPredicted RBP17.82■□□□□ 0.44
RAB5C-201ENST00000346213 TWF2Q6IBS0 349 aaKnown RBP17.82■□□□□ 0.44
RAB5C-201ENST00000346213 TCP11Q8WWU5 503 aa17.82■□□□□ 0.44
RAB5C-201ENST00000346213 CHST12Q9NRB3 414 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms