RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 PGBD4Q96DM1 585 aa17.85■□□□□ 0.45
ATG4B-201ENST00000344376 UBE2ZQ9H832 354 aaPredicted RBP17.85■□□□□ 0.45
ATG4B-201ENST00000344376 MINDY3Q9H8M7 445 aa17.85■□□□□ 0.45
ATG4B-201ENST00000344376 FAM105AQ9NUU6 356 aa17.85■□□□□ 0.45
ATG4B-201ENST00000344376 RNF19AQ9NV58 838 aa17.85■□□□□ 0.45
ATG4B-201ENST00000344376 INO80B-WBP1J3KQ70 363 aa17.84■□□□□ 0.45
ATG4B-201ENST00000344376 NCK2O43639 380 aa17.84■□□□□ 0.45
ATG4B-201ENST00000344376 CSPG5O95196 566 aa17.84■□□□□ 0.45
ATG4B-201ENST00000344376 UBE3AQ05086 875 aa17.84■□□□□ 0.45
ATG4B-201ENST00000344376 CAPSQ13938 189 aa17.84■□□□□ 0.45
ATG4B-201ENST00000344376 CLLU1OSQ5K130 101 aa17.84■□□□□ 0.45
ATG4B-201ENST00000344376 KRT79Q5XKE5 535 aa17.84■□□□□ 0.45
ATG4B-201ENST00000344376 IGSF22Q8N9C0 903 aa17.84■□□□□ 0.45
ATG4B-201ENST00000344376 SPPL3Q8TCT6 385 aa17.84■□□□□ 0.45
ATG4B-201ENST00000344376 ASAP3Q8TDY4 903 aa17.84■□□□□ 0.45
ATG4B-201ENST00000344376 SNX29Q8TEQ0 813 aa17.84■□□□□ 0.45
ATG4B-201ENST00000344376 ZNF623O75123 536 aa17.83■□□□□ 0.45
ATG4B-201ENST00000344376 ATF7P17544 494 aaPredicted RBP17.83■□□□□ 0.45
ATG4B-201ENST00000344376 PDCP20941 246 aa17.83■□□□□ 0.45
ATG4B-201ENST00000344376 GLRA2P23416 452 aa17.83■□□□□ 0.45
ATG4B-201ENST00000344376 AXLP30530 894 aa17.83■□□□□ 0.45
ATG4B-201ENST00000344376 PPM1AP35813 382 aa17.83■□□□□ 0.45
ATG4B-201ENST00000344376 CUL4AQ13619 759 aa17.83■□□□□ 0.45
ATG4B-201ENST00000344376 PADI6Q6TGC4 694 aa17.83■□□□□ 0.45
ATG4B-201ENST00000344376 GLB1LQ6UWU2 654 aa17.83■□□□□ 0.45
ATG4B-201ENST00000344376 MAEAQ7L5Y9 396 aa17.83■□□□□ 0.45
ATG4B-201ENST00000344376 IFNLR1Q8IU57 520 aaPredicted RBP17.83■□□□□ 0.45
ATG4B-201ENST00000344376 ADAMTS19Q8TE59 1207 aa17.83■□□□□ 0.45
ATG4B-201ENST00000344376 POF1BQ8WVV4 589 aa17.83■□□□□ 0.45
ATG4B-201ENST00000344376 CCDC51Q96ER9 411 aa17.83■□□□□ 0.45
ATG4B-201ENST00000344376 ZNF558Q96NG5 402 aa17.83■□□□□ 0.45
ATG4B-201ENST00000344376 NFKBIZQ9BYH8 718 aa17.83■□□□□ 0.45
ATG4B-201ENST00000344376 CWH43Q9H720 699 aa17.83■□□□□ 0.45
ATG4B-201ENST00000344376 PCDHB2Q9Y5E7 798 aa17.83■□□□□ 0.45
ATG4B-201ENST00000344376 FGF18O76093 207 aa17.83■□□□□ 0.44
ATG4B-201ENST00000344376 NOTUMQ6P988 496 aa17.83■□□□□ 0.44
ATG4B-201ENST00000344376 HCSTQ9UBK5 93 aa17.83■□□□□ 0.44
ATG4B-201ENST00000344376 KIAA1024Q9UPX6 916 aa17.83■□□□□ 0.44
ATG4B-201ENST00000344376 FNDC1Q4ZHG4 1894 aaPredicted RBP17.82■□□□□ 0.44
ATG4B-201ENST00000344376 CARNS1A5YM72 827 aa17.82■□□□□ 0.44
ATG4B-201ENST00000344376 LRRIQ4A6NIV6 560 aa17.82■□□□□ 0.44
ATG4B-201ENST00000344376 TSPAN1O60635 241 aa17.82■□□□□ 0.44
ATG4B-201ENST00000344376 KCNA5P22460 613 aa17.82■□□□□ 0.44
ATG4B-201ENST00000344376 KCNQ1P51787 676 aa17.82■□□□□ 0.44
ATG4B-201ENST00000344376 ATP2C1P98194 919 aaPredicted RBP17.82■□□□□ 0.44
ATG4B-201ENST00000344376 MBTD1Q05BQ5 628 aa17.82■□□□□ 0.44
ATG4B-201ENST00000344376 KCNT2Q6UVM3 1135 aa17.82■□□□□ 0.44
ATG4B-201ENST00000344376 EP400NLQ6ZTU2 488 aa17.82■□□□□ 0.44
ATG4B-201ENST00000344376 BRAPQ7Z569 592 aa17.82■□□□□ 0.44
ATG4B-201ENST00000344376 ZBTB8OSQ8IWT0 167 aa17.82■□□□□ 0.44
ATG4B-201ENST00000344376 CNNM3Q8NE01 707 aa17.82■□□□□ 0.44
ATG4B-201ENST00000344376 LPPQ93052 612 aa17.82■□□□□ 0.44
ATG4B-201ENST00000344376 PABPC5Q96DU9 382 aaKnown RBP17.82■□□□□ 0.44
ATG4B-201ENST00000344376 BHMT2Q9H2M3 363 aa17.82■□□□□ 0.44
ATG4B-201ENST00000344376 GPRC5CQ9NQ84 441 aa17.82■□□□□ 0.44
ATG4B-201ENST00000344376 DDX19AQ9NUU7 478 aaKnown RBP17.82■□□□□ 0.44
ATG4B-201ENST00000344376 PUF60Q9UHX1 559 aaKnown RBP17.82■□□□□ 0.44
ATG4B-201ENST00000344376 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.81■□□□□ 0.44
ATG4B-201ENST00000344376 VPS37CA5D8V6 355 aaPredicted RBP17.81■□□□□ 0.44
ATG4B-201ENST00000344376 CYP11B2P19099 503 aa17.81■□□□□ 0.44
ATG4B-201ENST00000344376 HOXA11P31270 313 aaPredicted RBP17.81■□□□□ 0.44
ATG4B-201ENST00000344376 LRRC55Q6ZSA7 311 aa17.81■□□□□ 0.44
ATG4B-201ENST00000344376 URGCPQ8TCY9 931 aa17.81■□□□□ 0.44
ATG4B-201ENST00000344376 MICAL1Q8TDZ2 1067 aa17.81■□□□□ 0.44
ATG4B-201ENST00000344376 UHRF1Q96T88 793 aaPredicted RBP17.81■□□□□ 0.44
ATG4B-201ENST00000344376 TLR9Q9NR96 1032 aa17.81■□□□□ 0.44
ATG4B-201ENST00000344376 CLDND1Q9NY35 253 aa17.81■□□□□ 0.44
ATG4B-201ENST00000344376 DNM3Q9UQ16 869 aa17.81■□□□□ 0.44
ATG4B-201ENST00000344376 LZTS1Q9Y250 596 aa17.81■□□□□ 0.44
ATG4B-201ENST00000344376 INPP5FQ9Y2H2 1132 aa17.81■□□□□ 0.44
ATG4B-201ENST00000344376 KIAA1671Q9BY89 1806 aa17.81■□□□□ 0.44
ATG4B-201ENST00000344376 CNTNAP2Q9UHC6 1331 aa17.81■□□□□ 0.44
ATG4B-201ENST00000344376 BMP15O95972 392 aa17.8■□□□□ 0.44
ATG4B-201ENST00000344376 BMP1P13497 986 aa17.8■□□□□ 0.44
ATG4B-201ENST00000344376 DNAJB1P25685 340 aa17.8■□□□□ 0.44
ATG4B-201ENST00000344376 PLCB3Q01970 1234 aa17.8■□□□□ 0.44
ATG4B-201ENST00000344376 KRT17Q04695 432 aa17.8■□□□□ 0.44
ATG4B-201ENST00000344376 RNASELQ05823 741 aaKnown RBP17.8■□□□□ 0.44
ATG4B-201ENST00000344376 CAMK1Q14012 370 aa17.8■□□□□ 0.44
ATG4B-201ENST00000344376 PPP2R5AQ15172 486 aa17.8■□□□□ 0.44
ATG4B-201ENST00000344376 LEXMQ3ZCV2 418 aa17.8■□□□□ 0.44
ATG4B-201ENST00000344376 LONRF3Q496Y0 759 aa17.8■□□□□ 0.44
ATG4B-201ENST00000344376 NOMO2Q5JPE7 1267 aa17.8■□□□□ 0.44
ATG4B-201ENST00000344376 ARL6IP4Q66PJ3 421 aaKnown RBP17.8■□□□□ 0.44
ATG4B-201ENST00000344376 PDE12Q6L8Q7 609 aaKnown RBP17.8■□□□□ 0.44
ATG4B-201ENST00000344376 C2orf40Q9H1Z8 148 aa17.8■□□□□ 0.44
ATG4B-201ENST00000344376 UBN1Q9NPG3 1134 aa17.8■□□□□ 0.44
ATG4B-201ENST00000344376 SPG21Q9NZD8 308 aa17.8■□□□□ 0.44
ATG4B-201ENST00000344376 CUL9Q8IWT3 2517 aa17.8■□□□□ 0.44
ATG4B-201ENST00000344376 REV3LO60673 3130 aa17.8■□□□□ 0.44
ATG4B-201ENST00000344376 PP2D1A8MPX8 630 aa17.79■□□□□ 0.44
ATG4B-201ENST00000344376 ALDH7A1P49419 539 aaKnown RBP17.79■□□□□ 0.44
ATG4B-201ENST00000344376 ECM1Q16610 540 aa17.79■□□□□ 0.44
ATG4B-201ENST00000344376 MRPL10Q7Z7H8 261 aaKnown RBP17.79■□□□□ 0.44
ATG4B-201ENST00000344376 HACE1Q8IYU2 909 aa17.79■□□□□ 0.44
ATG4B-201ENST00000344376 MRPS27Q92552 414 aaKnown RBP17.79■□□□□ 0.44
ATG4B-201ENST00000344376 IFT74Q96LB3 600 aa17.79■□□□□ 0.44
ATG4B-201ENST00000344376 TRIM6Q9C030 488 aaPredicted RBP17.79■□□□□ 0.44
ATG4B-201ENST00000344376 CSRNP2Q9H175 543 aa17.79■□□□□ 0.44
ATG4B-201ENST00000344376 RSAD1Q9HA92 442 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms