RNA–Protein interactions for RNA: ENST00000343348.10

SEMA6A-202, Transcript of semaphorin 6A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA6A, Length 6,878 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6A-202ENST00000343348 BZW1Q7L1Q6 419 aaKnown RBP12.93□□□□□ -0.34
SEMA6A-202ENST00000343348 NR3C1P04150 777 aa12.93□□□□□ -0.34
SEMA6A-202ENST00000343348 ZNF667Q5HYK9 610 aa12.93□□□□□ -0.34
SEMA6A-202ENST00000343348 DHX40Q8IX18 779 aaKnown RBP12.93□□□□□ -0.34
SEMA6A-202ENST00000343348 SH2D3CQ8N5H7 860 aa12.93□□□□□ -0.34
SEMA6A-202ENST00000343348 TAF1DQ9H5J8 278 aaPredicted RBP12.93□□□□□ -0.34
SEMA6A-202ENST00000343348 KANSL2Q9H9L4 492 aa12.93□□□□□ -0.34
SEMA6A-202ENST00000343348 MAST1Q9Y2H9 1570 aa12.92□□□□□ -0.34
SEMA6A-202ENST00000343348 SMARCA1P28370 1054 aa12.92□□□□□ -0.34
SEMA6A-202ENST00000343348 STAT3P40763 770 aa12.92□□□□□ -0.34
SEMA6A-202ENST00000343348 CACNB3P54284 484 aa12.92□□□□□ -0.34
SEMA6A-202ENST00000343348 OLFML2BQ68BL8 750 aa12.92□□□□□ -0.34
SEMA6A-202ENST00000343348 DPY19L2Q6NUT2 758 aa12.92□□□□□ -0.34
SEMA6A-202ENST00000343348 CYB5R4Q7L1T6 521 aa12.92□□□□□ -0.34
SEMA6A-202ENST00000343348 EXOC8Q8IYI6 725 aa12.92□□□□□ -0.34
SEMA6A-202ENST00000343348 NUP93Q8N1F7 819 aa12.92□□□□□ -0.34
SEMA6A-202ENST00000343348 ADD3Q9UEY8 706 aaKnown RBP12.92□□□□□ -0.34
SEMA6A-202ENST00000343348 KLHL38Q2WGJ6 581 aa12.92□□□□□ -0.34
SEMA6A-202ENST00000343348 RBM41Q96IZ5 413 aaKnown RBP12.92□□□□□ -0.34
SEMA6A-202ENST00000343348 NPHS2Q9NP85 383 aa12.92□□□□□ -0.34
SEMA6A-202ENST00000343348 DIS3Q9Y2L1 958 aaKnown RBP12.92□□□□□ -0.34
SEMA6A-202ENST00000343348 MLH3Q9UHC1 1453 aa12.92□□□□□ -0.34
SEMA6A-202ENST00000343348 NEDD4P46934 1319 aa12.92□□□□□ -0.34
SEMA6A-202ENST00000343348 MYL3P08590 195 aa12.92□□□□□ -0.34
SEMA6A-202ENST00000343348 COBLL1Q53SF7 1204 aa12.92□□□□□ -0.34
SEMA6A-202ENST00000343348 TJAP1Q5JTD0 557 aa12.92□□□□□ -0.34
SEMA6A-202ENST00000343348 AMACRQ9UHK6 382 aa12.92□□□□□ -0.34
SEMA6A-202ENST00000343348 WDR17Q8IZU2 1322 aa12.92□□□□□ -0.34
SEMA6A-202ENST00000343348 PP2D1A8MPX8 630 aa12.92□□□□□ -0.34
SEMA6A-202ENST00000343348 USP17L5A8MUK1 530 aa12.92□□□□□ -0.34
SEMA6A-202ENST00000343348 ATP9BO43861 1147 aa12.92□□□□□ -0.34
SEMA6A-202ENST00000343348 KRT4P19013 534 aa12.92□□□□□ -0.34
SEMA6A-202ENST00000343348 PGM1P36871 562 aa12.92□□□□□ -0.34
SEMA6A-202ENST00000343348 NBPF9Q3BBW0 867 aa12.92□□□□□ -0.34
SEMA6A-202ENST00000343348 SH3RF3Q8TEJ3 882 aaPredicted RBP12.92□□□□□ -0.34
SEMA6A-202ENST00000343348 UNC45AQ9H3U1 944 aa12.92□□□□□ -0.34
SEMA6A-202ENST00000343348 NDFIP2Q9NV92 336 aa12.92□□□□□ -0.34
SEMA6A-202ENST00000343348 CDV3Q9UKY7 258 aaKnown RBP12.92□□□□□ -0.34
SEMA6A-202ENST00000343348 PCDHA6Q9UN73 950 aa12.92□□□□□ -0.34
SEMA6A-202ENST00000343348 PCDHA8Q9Y5H6 950 aa12.92□□□□□ -0.34
SEMA6A-202ENST00000343348 CCDC78A2IDD5 438 aa12.92□□□□□ -0.34
SEMA6A-202ENST00000343348 RASSF10A6NK89 507 aa12.92□□□□□ -0.34
SEMA6A-202ENST00000343348 PPP1R2P3Q6NXS1 205 aa12.92□□□□□ -0.34
SEMA6A-202ENST00000343348 UNC13DQ70J99 1090 aa12.92□□□□□ -0.34
SEMA6A-202ENST00000343348 ATP6V1G3Q96LB4 118 aa12.92□□□□□ -0.34
SEMA6A-202ENST00000343348 ASNSD1Q9NWL6 643 aa12.92□□□□□ -0.34
SEMA6A-202ENST00000343348 DBR1Q9UK59 544 aaKnown RBP12.92□□□□□ -0.34
SEMA6A-202ENST00000343348 ABCB11O95342 1321 aa12.92□□□□□ -0.34
SEMA6A-202ENST00000343348 PLXNC1O60486 1568 aa12.92□□□□□ -0.34
SEMA6A-202ENST00000343348 PPARGP37231 505 aaPredicted RBP12.92□□□□□ -0.34
SEMA6A-202ENST00000343348 TRPC1P48995 793 aa12.92□□□□□ -0.34
SEMA6A-202ENST00000343348 PRAMEP78395 509 aa12.92□□□□□ -0.34
SEMA6A-202ENST00000343348 COASYQ13057 564 aa12.92□□□□□ -0.34
SEMA6A-202ENST00000343348 DMC1Q14565 340 aa12.92□□□□□ -0.34
SEMA6A-202ENST00000343348 CNGA3Q16281 694 aa12.92□□□□□ -0.34
SEMA6A-202ENST00000343348 AFG1LQ8WV93 481 aa12.92□□□□□ -0.34
SEMA6A-202ENST00000343348 TMA16Q96EY4 203 aaKnown RBP12.92□□□□□ -0.34
SEMA6A-202ENST00000343348 PTPRTO14522 1441 aa12.91□□□□□ -0.34
SEMA6A-202ENST00000343348 ATP10DQ9P241 1426 aa12.91□□□□□ -0.34
SEMA6A-202ENST00000343348 ARHGEF12Q9NZN5 1544 aa12.91□□□□□ -0.34
SEMA6A-202ENST00000343348 M0QYV0 167 aa12.91□□□□□ -0.34
SEMA6A-202ENST00000343348 ELF1P32519 619 aa12.91□□□□□ -0.34
SEMA6A-202ENST00000343348 DYNC1I2Q13409 638 aaKnown RBP12.91□□□□□ -0.34
SEMA6A-202ENST00000343348 TOB2Q14106 344 aaPredicted RBP12.91□□□□□ -0.34
SEMA6A-202ENST00000343348 DRAP1Q14919 205 aaPredicted RBP12.91□□□□□ -0.34
SEMA6A-202ENST00000343348 SLC9A5Q14940 896 aa12.91□□□□□ -0.34
SEMA6A-202ENST00000343348 TRIM60Q495X7 471 aa12.91□□□□□ -0.34
SEMA6A-202ENST00000343348 ARHGEF25Q86VW2 580 aa12.91□□□□□ -0.34
SEMA6A-202ENST00000343348 PLEKHF1Q96S99 279 aa12.91□□□□□ -0.34
SEMA6A-202ENST00000343348 ZNF341Q9BYN7 854 aa12.91□□□□□ -0.34
SEMA6A-202ENST00000343348 RUBCNLQ9H714 662 aa12.91□□□□□ -0.34
SEMA6A-202ENST00000343348 ZBTB1Q9Y2K1 713 aa12.91□□□□□ -0.34
SEMA6A-202ENST00000343348 POTEB3A0JP26 581 aa12.91□□□□□ -0.34
SEMA6A-202ENST00000343348 POTECB2RU33 542 aa12.91□□□□□ -0.34
SEMA6A-202ENST00000343348 CLDN3O15551 220 aa12.91□□□□□ -0.34
SEMA6A-202ENST00000343348 SERPINI2O75830 405 aa12.91□□□□□ -0.34
SEMA6A-202ENST00000343348 HDAC4P56524 1084 aa12.91□□□□□ -0.34
SEMA6A-202ENST00000343348 CACNB2Q08289 660 aaPredicted RBP12.91□□□□□ -0.34
SEMA6A-202ENST00000343348 POTEBQ6S5H4 581 aa12.91□□□□□ -0.34
SEMA6A-202ENST00000343348 LONP2Q86WA8 852 aa12.91□□□□□ -0.34
SEMA6A-202ENST00000343348 SLC8A2Q9UPR5 921 aa12.91□□□□□ -0.34
SEMA6A-202ENST00000343348 LOC102724428A0A0B4J2F2 783 aa12.91□□□□□ -0.34
SEMA6A-202ENST00000343348 IFNA8P32881 189 aa12.91□□□□□ -0.34
SEMA6A-202ENST00000343348 SIK1P57059 783 aa12.91□□□□□ -0.34
SEMA6A-202ENST00000343348 ROR1Q01973 937 aa12.91□□□□□ -0.34
SEMA6A-202ENST00000343348 PPP4R3CPQ6ZMV5 832 aa12.91□□□□□ -0.34
SEMA6A-202ENST00000343348 FOXN1O15353 648 aa12.91□□□□□ -0.34
SEMA6A-202ENST00000343348 PRPF4O43172 522 aaKnown RBP eCLIP12.91□□□□□ -0.34
SEMA6A-202ENST00000343348 GNA15P30679 374 aa12.91□□□□□ -0.34
SEMA6A-202ENST00000343348 ARMC2Q8NEN0 867 aa12.91□□□□□ -0.34
SEMA6A-202ENST00000343348 SNF8Q96H20 258 aa12.91□□□□□ -0.34
SEMA6A-202ENST00000343348 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.91□□□□□ -0.34
SEMA6A-202ENST00000343348 BRIP1Q9BX63 1249 aa12.91□□□□□ -0.34
SEMA6A-202ENST00000343348 DFFAO00273 331 aa12.91□□□□□ -0.34
SEMA6A-202ENST00000343348 KRT17Q04695 432 aa12.91□□□□□ -0.34
SEMA6A-202ENST00000343348 ASPSCR1Q9BZE9 553 aa12.91□□□□□ -0.34
SEMA6A-202ENST00000343348 OSBPL3Q9H4L5 887 aa12.91□□□□□ -0.34
SEMA6A-202ENST00000343348 MARCOQ9UEW3 520 aaPredicted RBP12.91□□□□□ -0.34
SEMA6A-202ENST00000343348 USP17L15C9J2P7 530 aa12.9□□□□□ -0.34
SEMA6A-202ENST00000343348 USP17L13C9JLJ4 530 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms