RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 SEC24DO94855 1032 aaPredicted RBP18.67■□□□□ 0.58
SMAD4-201ENST00000342988 YIPF2Q9BWQ6 316 aa18.67■□□□□ 0.58
SMAD4-201ENST00000342988 PACSIN1Q9BY11 444 aa18.67■□□□□ 0.58
SMAD4-201ENST00000342988 EPN3Q9H201 632 aa18.67■□□□□ 0.58
SMAD4-201ENST00000342988 TNPO2O14787 897 aaKnown RBP18.67■□□□□ 0.58
SMAD4-201ENST00000342988 BNIP3LO60238 219 aa18.67■□□□□ 0.58
SMAD4-201ENST00000342988 CDC40O60508 579 aaKnown RBP eCLIP18.67■□□□□ 0.58
SMAD4-201ENST00000342988 IL6P05231 212 aa18.67■□□□□ 0.58
SMAD4-201ENST00000342988 CALB1P05937 261 aa18.67■□□□□ 0.58
SMAD4-201ENST00000342988 RHPN2Q8IUC4 686 aa18.67■□□□□ 0.58
SMAD4-201ENST00000342988 ELAC2Q9BQ52 826 aaKnown RBP18.67■□□□□ 0.58
SMAD4-201ENST00000342988 USP40Q9NVE5 1235 aa18.67■□□□□ 0.58
SMAD4-201ENST00000342988 PA2G4Q9UQ80 394 aaKnown RBP18.67■□□□□ 0.58
SMAD4-201ENST00000342988 MAN1C1Q9NR34 630 aa18.67■□□□□ 0.58
SMAD4-201ENST00000342988 INO80B-WBP1J3KQ70 363 aa18.66■□□□□ 0.58
SMAD4-201ENST00000342988 SERPINH1P50454 418 aaKnown RBP18.66■□□□□ 0.58
SMAD4-201ENST00000342988 INO80BQ9C086 356 aaPredicted RBP18.66■□□□□ 0.58
SMAD4-201ENST00000342988 CACNA2D2Q9NY47 1150 aa18.66■□□□□ 0.58
SMAD4-201ENST00000342988 MAP3K5Q99683 1374 aa18.66■□□□□ 0.58
SMAD4-201ENST00000342988 OLFML2BQ68BL8 750 aa18.66■□□□□ 0.58
SMAD4-201ENST00000342988 TCP10Q12799 353 aa18.66■□□□□ 0.58
SMAD4-201ENST00000342988 CASP10Q92851 521 aa18.66■□□□□ 0.58
SMAD4-201ENST00000342988 CTTNBP2Q8WZ74 1663 aa18.66■□□□□ 0.58
SMAD4-201ENST00000342988 ZMYM6O95789 1325 aa18.66■□□□□ 0.58
SMAD4-201ENST00000342988 HAUS5O94927 633 aa18.66■□□□□ 0.58
SMAD4-201ENST00000342988 BBS9Q3SYG4 887 aa18.66■□□□□ 0.58
SMAD4-201ENST00000342988 VPS37AQ8NEZ2 397 aa18.66■□□□□ 0.58
SMAD4-201ENST00000342988 SP110Q9HB58 689 aa18.66■□□□□ 0.58
SMAD4-201ENST00000342988 NRBP1Q9UHY1 535 aa18.66■□□□□ 0.58
SMAD4-201ENST00000342988 MYO1GB0I1T2 1018 aa18.66■□□□□ 0.58
SMAD4-201ENST00000342988 DYNC1LI2O43237 492 aaPredicted RBP18.66■□□□□ 0.58
SMAD4-201ENST00000342988 PURAQ00577 322 aaKnown RBP18.66■□□□□ 0.58
SMAD4-201ENST00000342988 DLGAP5Q15398 846 aa18.66■□□□□ 0.58
SMAD4-201ENST00000342988 FAM162AQ96A26 154 aa18.66■□□□□ 0.58
SMAD4-201ENST00000342988 OSBPL6Q9BZF3 934 aa18.66■□□□□ 0.58
SMAD4-201ENST00000342988 TOGARAM2Q6ZUX3 1019 aa18.66■□□□□ 0.58
SMAD4-201ENST00000342988 FBXO11Q86XK2 927 aa18.66■□□□□ 0.58
SMAD4-201ENST00000342988 NOVA2Q9UNW9 492 aaKnown RBP18.66■□□□□ 0.58
SMAD4-201ENST00000342988 DNALI1O14645 258 aaPredicted RBP18.66■□□□□ 0.58
SMAD4-201ENST00000342988 STRNO43815 780 aa18.66■□□□□ 0.58
SMAD4-201ENST00000342988 TSPAN17Q96FV3 270 aa18.66■□□□□ 0.58
SMAD4-201ENST00000342988 TAB1Q15750 504 aa18.65■□□□□ 0.58
SMAD4-201ENST00000342988 EPC1Q9H2F5 836 aa18.65■□□□□ 0.58
SMAD4-201ENST00000342988 GMEB1Q9Y692 573 aa18.65■□□□□ 0.58
SMAD4-201ENST00000342988 AATKQ6ZMQ8 1374 aa18.65■□□□□ 0.58
SMAD4-201ENST00000342988 ZNF500O60304 480 aaPredicted RBP18.65■□□□□ 0.58
SMAD4-201ENST00000342988 FKBP14Q9NWM8 211 aa18.65■□□□□ 0.58
SMAD4-201ENST00000342988 PI4K2BG5E9Z4 385 aa18.65■□□□□ 0.58
SMAD4-201ENST00000342988 STAG2Q8N3U4 1231 aa18.65■□□□□ 0.58
SMAD4-201ENST00000342988 DDHD1Q8NEL9 900 aa18.65■□□□□ 0.58
SMAD4-201ENST00000342988 URGCPQ8TCY9 931 aa18.65■□□□□ 0.58
SMAD4-201ENST00000342988 AKAP10O43572 662 aa18.65■□□□□ 0.58
SMAD4-201ENST00000342988 MRPS35P82673 323 aaKnown RBP18.65■□□□□ 0.58
SMAD4-201ENST00000342988 PEG10Q86TG7 708 aaKnown RBP18.65■□□□□ 0.58
SMAD4-201ENST00000342988 STAMQ92783 540 aa18.65■□□□□ 0.58
SMAD4-201ENST00000342988 ITGB1BP2Q9UKP3 347 aa18.65■□□□□ 0.58
SMAD4-201ENST00000342988 TSPY1Q01534 308 aa18.65■□□□□ 0.58
SMAD4-201ENST00000342988 C1DQ13901 141 aaKnown RBP18.65■□□□□ 0.58
SMAD4-201ENST00000342988 MAN2A1Q16706 1144 aa18.65■□□□□ 0.58
SMAD4-201ENST00000342988 GJA10Q969M2 543 aa18.65■□□□□ 0.58
SMAD4-201ENST00000342988 GNAT1P11488 350 aa18.65■□□□□ 0.58
SMAD4-201ENST00000342988 ACSBG1Q96GR2 724 aa18.65■□□□□ 0.58
SMAD4-201ENST00000342988 VSNL1P62760 191 aa18.64■□□□□ 0.58
SMAD4-201ENST00000342988 FKBP3Q00688 224 aaKnown RBP18.64■□□□□ 0.58
SMAD4-201ENST00000342988 NME9Q86XW9 330 aa18.64■□□□□ 0.58
SMAD4-201ENST00000342988 SAYSD1Q9NPB0 183 aa18.64■□□□□ 0.58
SMAD4-201ENST00000342988 ASNSD1Q9NWL6 643 aa18.64■□□□□ 0.58
SMAD4-201ENST00000342988 MLH1P40692 756 aa18.64■□□□□ 0.58
SMAD4-201ENST00000342988 SLC16A1P53985 500 aa18.64■□□□□ 0.58
SMAD4-201ENST00000342988 TUBGCP4Q9UGJ1 667 aa18.64■□□□□ 0.58
SMAD4-201ENST00000342988 PCDHA1Q9Y5I3 950 aa18.64■□□□□ 0.58
SMAD4-201ENST00000342988 S100A1P23297 94 aa18.64■□□□□ 0.57
SMAD4-201ENST00000342988 FASTKD1Q53R41 847 aaKnown RBP18.64■□□□□ 0.57
SMAD4-201ENST00000342988 FAM26FQ5R3K3 315 aa18.64■□□□□ 0.57
SMAD4-201ENST00000342988 P3H2Q8IVL5 708 aa18.64■□□□□ 0.57
SMAD4-201ENST00000342988 RUBCNQ92622 972 aa18.64■□□□□ 0.57
SMAD4-201ENST00000342988 ZSCAN10Q96SZ4 725 aaPredicted RBP18.64■□□□□ 0.57
SMAD4-201ENST00000342988 SF3B1O75533 1304 aaKnown RBP eCLIP18.64■□□□□ 0.576e-6■■■■■ 89.4
SMAD4-201ENST00000342988 PSMD12O00232 456 aaPredicted RBP18.64■□□□□ 0.57
SMAD4-201ENST00000342988 INPP5DQ92835 1189 aa18.64■□□□□ 0.57
SMAD4-201ENST00000342988 DHX36Q9H2U1 1008 aaKnown RBP18.64■□□□□ 0.57
SMAD4-201ENST00000342988 DPYSL4O14531 572 aa18.64■□□□□ 0.57
SMAD4-201ENST00000342988 DNAL1Q4LDG9 190 aa18.64■□□□□ 0.57
SMAD4-201ENST00000342988 EAPPQ56P03 285 aaPredicted RBP18.64■□□□□ 0.57
SMAD4-201ENST00000342988 RMND5BQ96G75 393 aaPredicted RBP18.64■□□□□ 0.57
SMAD4-201ENST00000342988 SLC39A2Q9NP94 309 aa18.64■□□□□ 0.57
SMAD4-201ENST00000342988 USP44Q9H0E7 712 aa18.64■□□□□ 0.57
SMAD4-201ENST00000342988 NMRK1Q9NWW6 199 aa18.64■□□□□ 0.57
SMAD4-201ENST00000342988 UBA2Q9UBT2 640 aaPredicted RBP18.64■□□□□ 0.57
SMAD4-201ENST00000342988 RGS20O76081 388 aa18.64■□□□□ 0.57
SMAD4-201ENST00000342988 ALDH1A2O94788 518 aa18.64■□□□□ 0.57
SMAD4-201ENST00000342988 WLSQ5T9L3 541 aa18.64■□□□□ 0.57
SMAD4-201ENST00000342988 FBXO42Q6P3S6 717 aa18.64■□□□□ 0.57
SMAD4-201ENST00000342988 APOA5Q6Q788 366 aa18.64■□□□□ 0.57
SMAD4-201ENST00000342988 CCDC60Q8IWA6 550 aaPredicted RBP18.64■□□□□ 0.57
SMAD4-201ENST00000342988 DCTPP1Q9H773 170 aa18.64■□□□□ 0.57
SMAD4-201ENST00000342988 UBE2TQ9NPD8 197 aaPredicted RBP18.64■□□□□ 0.57
SMAD4-201ENST00000342988 TAF4O00268 1085 aa18.63■□□□□ 0.57
SMAD4-201ENST00000342988 MFN2O95140 757 aa18.63■□□□□ 0.57
SMAD4-201ENST00000342988 KRT40Q6A162 431 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms