RNA–Protein interactions for RNA: ENST00000341460.5

SYDE2-202, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SYDE2, Length 5,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-202ENST00000341460 NFRKBQ6P4R8 1299 aa18.72■□□□□ 0.59
SYDE2-202ENST00000341460 HDAC6Q9UBN7 1215 aa18.72■□□□□ 0.59
SYDE2-202ENST00000341460 CARMIL3Q8ND23 1372 aa18.72■□□□□ 0.59
SYDE2-202ENST00000341460 CFAP74Q9C0B2 1584 aa18.72■□□□□ 0.59
SYDE2-202ENST00000341460 MIF4GDA9UHW6 222 aaKnown RBP18.72■□□□□ 0.59
SYDE2-202ENST00000341460 M0R2C6 588 aa18.72■□□□□ 0.59
SYDE2-202ENST00000341460 NFIBO00712 420 aa18.72■□□□□ 0.59
SYDE2-202ENST00000341460 CCNA1P78396 465 aa18.72■□□□□ 0.59
SYDE2-202ENST00000341460 DARS2Q6PI48 645 aaKnown RBP18.72■□□□□ 0.59
SYDE2-202ENST00000341460 HEATR4Q86WZ0 1026 aa18.72■□□□□ 0.59
SYDE2-202ENST00000341460 LBHD1Q9BQE6 289 aaPredicted RBP18.72■□□□□ 0.59
SYDE2-202ENST00000341460 TLR7Q9NYK1 1049 aaKnown RBP18.72■□□□□ 0.59
SYDE2-202ENST00000341460 SEPT9Q9UHD8 586 aaPredicted RBP18.72■□□□□ 0.59
SYDE2-202ENST00000341460 TMEM191CA6NGB0 347 aa18.72■□□□□ 0.59
SYDE2-202ENST00000341460 A6NJR5 290 aa18.72■□□□□ 0.59
SYDE2-202ENST00000341460 GRK2P25098 689 aa18.72■□□□□ 0.59
SYDE2-202ENST00000341460 KDSRQ06136 332 aa18.72■□□□□ 0.59
SYDE2-202ENST00000341460 RHOT2Q8IXI1 618 aa18.72■□□□□ 0.59
SYDE2-202ENST00000341460 GRAMD1CQ8IYS0 662 aa18.72■□□□□ 0.59
SYDE2-202ENST00000341460 SLITRK6Q9H5Y7 841 aa18.72■□□□□ 0.59
SYDE2-202ENST00000341460 BTBD7Q9P203 1132 aa18.72■□□□□ 0.59
SYDE2-202ENST00000341460 FAM187AA6NFU0 413 aa18.71■□□□□ 0.59
SYDE2-202ENST00000341460 ENO1P06733 434 aaKnown RBP18.71■□□□□ 0.59
SYDE2-202ENST00000341460 CYP21A2P08686 494 aa18.71■□□□□ 0.59
SYDE2-202ENST00000341460 NR2F2P24468 414 aa18.71■□□□□ 0.59
SYDE2-202ENST00000341460 PSMC2P35998 433 aaKnown RBP18.71■□□□□ 0.59
SYDE2-202ENST00000341460 PPP1R2P3Q6NXS1 205 aa18.71■□□□□ 0.59
SYDE2-202ENST00000341460 TRIM8Q9BZR9 551 aa18.71■□□□□ 0.59
SYDE2-202ENST00000341460 ZBTB1Q9Y2K1 713 aa18.71■□□□□ 0.59
SYDE2-202ENST00000341460 BBOX1O75936 387 aa18.71■□□□□ 0.59
SYDE2-202ENST00000341460 CCNE1P24864 410 aa18.71■□□□□ 0.59
SYDE2-202ENST00000341460 AGBL2Q5U5Z8 902 aa18.71■□□□□ 0.59
SYDE2-202ENST00000341460 ZBTB18Q99592 522 aa18.71■□□□□ 0.59
SYDE2-202ENST00000341460 KANSL2Q9H9L4 492 aa18.71■□□□□ 0.59
SYDE2-202ENST00000341460 KIF17Q9P2E2 1029 aa18.71■□□□□ 0.59
SYDE2-202ENST00000341460 NOC2LQ9Y3T9 749 aaKnown RBP18.71■□□□□ 0.59
SYDE2-202ENST00000341460 GFPT2O94808 682 aa18.71■□□□□ 0.59
SYDE2-202ENST00000341460 ADD2P35612 726 aa18.71■□□□□ 0.59
SYDE2-202ENST00000341460 COPS2P61201 443 aa18.71■□□□□ 0.59
SYDE2-202ENST00000341460 C3orf20Q8ND61 904 aa18.71■□□□□ 0.59
SYDE2-202ENST00000341460 RIN2Q8WYP3 895 aaPredicted RBP18.71■□□□□ 0.59
SYDE2-202ENST00000341460 WDR11Q9BZH6 1224 aa18.71■□□□□ 0.59
SYDE2-202ENST00000341460 MRPL47Q9HD33 250 aaKnown RBP18.71■□□□□ 0.59
SYDE2-202ENST00000341460 DISC1Q9NRI5 854 aa18.71■□□□□ 0.59
SYDE2-202ENST00000341460 ZNF839A8K0R7 811 aa18.71■□□□□ 0.59
SYDE2-202ENST00000341460 IFRD2Q12894 506 aaPredicted RBP18.71■□□□□ 0.59
SYDE2-202ENST00000341460 KCNK16Q96T55 309 aa18.71■□□□□ 0.59
SYDE2-202ENST00000341460 ADAMTS1Q9UHI8 967 aa18.71■□□□□ 0.59
SYDE2-202ENST00000341460 PLA2G4AP47712 749 aa18.7■□□□□ 0.58
SYDE2-202ENST00000341460 SEC24CP53992 1094 aa18.7■□□□□ 0.58
SYDE2-202ENST00000341460 SPICE1Q8N0Z3 855 aa18.7■□□□□ 0.58
SYDE2-202ENST00000341460 SPATA4Q8NEY3 305 aa18.7■□□□□ 0.58
SYDE2-202ENST00000341460 SLC7A3Q8WY07 619 aa18.7■□□□□ 0.58
SYDE2-202ENST00000341460 RPS6KC1Q96S38 1066 aa18.7■□□□□ 0.58
SYDE2-202ENST00000341460 ABCC12Q96J65 1359 aa18.7■□□□□ 0.58
SYDE2-202ENST00000341460 SYNJ2BP-COX16A0A087WUM0 186 aa18.7■□□□□ 0.58
SYDE2-202ENST00000341460 SFSWAPQ12872 951 aaKnown RBP18.7■□□□□ 0.58
SYDE2-202ENST00000341460 DEPDC1Q5TB30 811 aa18.7■□□□□ 0.58
SYDE2-202ENST00000341460 CCNI2Q6ZMN8 369 aaPredicted RBP18.7■□□□□ 0.58
SYDE2-202ENST00000341460 DNAAF3Q8N9W5 541 aa18.7■□□□□ 0.58
SYDE2-202ENST00000341460 NSUN7Q8NE18 718 aaKnown RBP18.7■□□□□ 0.58
SYDE2-202ENST00000341460 NDST4Q9H3R1 872 aa18.7■□□□□ 0.58
SYDE2-202ENST00000341460 COX16Q9P0S2 106 aa18.7■□□□□ 0.58
SYDE2-202ENST00000341460 IGSF1Q8N6C5 1336 aa18.7■□□□□ 0.58
SYDE2-202ENST00000341460 LZTS3O60299 673 aaPredicted RBP18.7■□□□□ 0.58
SYDE2-202ENST00000341460 ATP6V1E1P36543 226 aa18.7■□□□□ 0.58
SYDE2-202ENST00000341460 HSPA13P48723 471 aa18.7■□□□□ 0.58
SYDE2-202ENST00000341460 FOXD4Q12950 439 aaPredicted RBP18.7■□□□□ 0.58
SYDE2-202ENST00000341460 LRRC8EQ6NSJ5 796 aa18.7■□□□□ 0.58
SYDE2-202ENST00000341460 GCC2Q8IWJ2 1684 aa18.7■□□□□ 0.58
SYDE2-202ENST00000341460 ABCD1P33897 745 aa18.7■□□□□ 0.58
SYDE2-202ENST00000341460 NUP107P57740 925 aa18.7■□□□□ 0.58
SYDE2-202ENST00000341460 RESTQ13127 1097 aa18.7■□□□□ 0.58
SYDE2-202ENST00000341460 KRT39Q6A163 491 aa18.7■□□□□ 0.58
SYDE2-202ENST00000341460 EP400NLQ6ZTU2 488 aa18.7■□□□□ 0.58
SYDE2-202ENST00000341460 PCDHB4Q9Y5E5 795 aa18.7■□□□□ 0.58
SYDE2-202ENST00000341460 POTEAQ6S8J7 498 aa18.69■□□□□ 0.58
SYDE2-202ENST00000341460 ACCSQ96QU6 501 aa18.69■□□□□ 0.58
SYDE2-202ENST00000341460 SENP1Q9P0U3 644 aa18.69■□□□□ 0.58
SYDE2-202ENST00000341460 CLRN2A0PK11 232 aa18.69■□□□□ 0.58
SYDE2-202ENST00000341460 SLC4A1P02730 911 aa18.69■□□□□ 0.58
SYDE2-202ENST00000341460 DYNLT1P63172 113 aa18.69■□□□□ 0.58
SYDE2-202ENST00000341460 CC2D2BQ6DHV5 1058 aa18.69■□□□□ 0.58
SYDE2-202ENST00000341460 DPP9Q86TI2 863 aa18.69■□□□□ 0.58
SYDE2-202ENST00000341460 PYGLP06737 847 aa18.69■□□□□ 0.58
SYDE2-202ENST00000341460 NQO1P15559 274 aaKnown RBP18.69■□□□□ 0.58
SYDE2-202ENST00000341460 TAC1P20366 129 aa18.69■□□□□ 0.58
SYDE2-202ENST00000341460 SERPINB8P50452 374 aa18.69■□□□□ 0.58
SYDE2-202ENST00000341460 DYNLL1P63167 89 aaKnown RBP18.69■□□□□ 0.58
SYDE2-202ENST00000341460 INPP5AQ14642 412 aa18.69■□□□□ 0.58
SYDE2-202ENST00000341460 TAF1BQ53T94 588 aaPredicted RBP18.69■□□□□ 0.58
SYDE2-202ENST00000341460 KCTD1Q719H9 257 aa18.69■□□□□ 0.58
SYDE2-202ENST00000341460 PACS2Q86VP3 889 aa18.69■□□□□ 0.58
SYDE2-202ENST00000341460 SIX6OS1Q8N1H7 587 aa18.69■□□□□ 0.58
SYDE2-202ENST00000341460 HNRNPLLQ8WVV9 542 aaKnown RBP18.69■□□□□ 0.58
SYDE2-202ENST00000341460 ANKRD36BP1Q96IX9 119 aa18.69■□□□□ 0.58
SYDE2-202ENST00000341460 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.69■□□□□ 0.58
SYDE2-202ENST00000341460 DDX47Q9H0S4 455 aaKnown RBP18.69■□□□□ 0.58
SYDE2-202ENST00000341460 PITPNM2Q9BZ72 1349 aa18.69■□□□□ 0.58
SYDE2-202ENST00000341460 CCDC195A0A1B0GUA6 201 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms