RNA–Protein interactions for RNA: ENST00000341455.10

CCDC66-202, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 3,042 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-202ENST00000341455 HAS1Q92839 578 aa3.94□□□□□ -1.78
CCDC66-202ENST00000341455 PHKBQ93100 1093 aa3.94□□□□□ -1.78
CCDC66-202ENST00000341455 MRFAP1L1Q96HT8 127 aa3.94□□□□□ -1.78
CCDC66-202ENST00000341455 TCEANC2Q96MN5 208 aa3.94□□□□□ -1.78
CCDC66-202ENST00000341455 CITED4Q96RK1 184 aa3.94□□□□□ -1.78
CCDC66-202ENST00000341455 RMDN3Q96TC7 470 aa3.94□□□□□ -1.78
CCDC66-202ENST00000341455 GPR20Q99678 358 aa3.94□□□□□ -1.78
CCDC66-202ENST00000341455 BUD13Q9BRD0 619 aaKnown RBP eCLIP3.94□□□□□ -1.783e-12■■■■□ 22.6
CCDC66-202ENST00000341455 TIPINQ9BVW5 301 aa3.94□□□□□ -1.78
CCDC66-202ENST00000341455 C1QTNF2Q9BXJ5 285 aa3.94□□□□□ -1.78
CCDC66-202ENST00000341455 NFKBIZQ9BYH8 718 aa3.94□□□□□ -1.78
CCDC66-202ENST00000341455 BRMS1Q9HCU9 246 aa3.94□□□□□ -1.78
CCDC66-202ENST00000341455 DDX56Q9NY93 547 aaKnown RBP3.94□□□□□ -1.78
CCDC66-202ENST00000341455 DLL3Q9NYJ7 618 aa3.94□□□□□ -1.78
CCDC66-202ENST00000341455 DBR1Q9UK59 544 aaKnown RBP3.94□□□□□ -1.78
CCDC66-202ENST00000341455 DOLKQ9UPQ8 538 aa3.94□□□□□ -1.78
CCDC66-202ENST00000341455 ZDHHC9Q9Y397 364 aa3.94□□□□□ -1.78
CCDC66-202ENST00000341455 PCDHGA11Q9Y5H2 935 aa3.94□□□□□ -1.78
CCDC66-202ENST00000341455 FAM86B1E9PN63 330 aa3.93□□□□□ -1.78
CCDC66-202ENST00000341455 CPLX1O14810 134 aa3.93□□□□□ -1.78
CCDC66-202ENST00000341455 TLR3O15455 904 aaKnown RBP3.93□□□□□ -1.78
CCDC66-202ENST00000341455 EYA4O95677 639 aa3.93□□□□□ -1.78
CCDC66-202ENST00000341455 GH1P01241 217 aa3.93□□□□□ -1.78
CCDC66-202ENST00000341455 MMP3P08254 477 aa3.93□□□□□ -1.78
CCDC66-202ENST00000341455 CTSHP09668 335 aa3.93□□□□□ -1.78
CCDC66-202ENST00000341455 FAM86B2P0C5J1 330 aa3.93□□□□□ -1.78
CCDC66-202ENST00000341455 UBA1P22314 1058 aaKnown RBP3.93□□□□□ -1.78
CCDC66-202ENST00000341455 CPT1AP50416 773 aa3.93□□□□□ -1.78
CCDC66-202ENST00000341455 CNTN2Q02246 1040 aa3.93□□□□□ -1.78
CCDC66-202ENST00000341455 ZP2Q05996 745 aa3.93□□□□□ -1.78
CCDC66-202ENST00000341455 TCF15Q12870 199 aa3.93□□□□□ -1.78
CCDC66-202ENST00000341455 TTLL4Q14679 1199 aa3.93□□□□□ -1.78
CCDC66-202ENST00000341455 TRIM71Q2Q1W2 868 aaKnown RBP3.93□□□□□ -1.78
CCDC66-202ENST00000341455 TMEM119Q4V9L6 283 aa3.93□□□□□ -1.78
CCDC66-202ENST00000341455 HEATR3Q7Z4Q2 680 aa3.93□□□□□ -1.78
CCDC66-202ENST00000341455 APBB1IPQ7Z5R6 666 aaPredicted RBP3.93□□□□□ -1.78
CCDC66-202ENST00000341455 NCAPG2Q86XI2 1143 aa3.93□□□□□ -1.78
CCDC66-202ENST00000341455 KRTAP1-3Q8IUG1 177 aa3.93□□□□□ -1.78
CCDC66-202ENST00000341455 CCDC83Q8IWF9 413 aa3.93□□□□□ -1.78
CCDC66-202ENST00000341455 HSCBQ8IWL3 235 aa3.93□□□□□ -1.78
CCDC66-202ENST00000341455 ANKRD35Q8N283 1001 aa3.93□□□□□ -1.78
CCDC66-202ENST00000341455 BADQ92934 168 aa3.93□□□□□ -1.78
CCDC66-202ENST00000341455 COL26A1Q96A83 441 aa3.93□□□□□ -1.78
CCDC66-202ENST00000341455 DMRTB1Q96MA1 342 aa3.93□□□□□ -1.78
CCDC66-202ENST00000341455 C16orf70Q9BSU1 422 aa3.93□□□□□ -1.78
CCDC66-202ENST00000341455 WDR11Q9BZH6 1224 aa3.93□□□□□ -1.78
CCDC66-202ENST00000341455 SRA1Q9HD15 236 aaKnown RBP3.93□□□□□ -1.78
CCDC66-202ENST00000341455 TUFT1Q9NNX1 390 aa3.93□□□□□ -1.78
CCDC66-202ENST00000341455 KCND2Q9NZV8 630 aa3.93□□□□□ -1.78
CCDC66-202ENST00000341455 PIK3R2O00459 728 aa3.93□□□□□ -1.78
CCDC66-202ENST00000341455 GAS2O43903 313 aaKnown RBP3.93□□□□□ -1.78
CCDC66-202ENST00000341455 DNAJC6O75061 913 aa3.93□□□□□ -1.78
CCDC66-202ENST00000341455 ARIH2O95376 493 aa3.93□□□□□ -1.78
CCDC66-202ENST00000341455 CXCL10P02778 98 aa3.93□□□□□ -1.78
CCDC66-202ENST00000341455 PROCP04070 461 aa3.93□□□□□ -1.78
CCDC66-202ENST00000341455 ZSCAN22P10073 491 aaPredicted RBP3.93□□□□□ -1.78
CCDC66-202ENST00000341455 SYT1P21579 422 aa3.93□□□□□ -1.78
CCDC66-202ENST00000341455 PURAQ00577 322 aaKnown RBP3.93□□□□□ -1.78
CCDC66-202ENST00000341455 ATP2B2Q01814 1243 aa3.93□□□□□ -1.78
CCDC66-202ENST00000341455 FAAP100Q0VG06 881 aa3.93□□□□□ -1.78
CCDC66-202ENST00000341455 ITGB3BPQ13352 177 aaPredicted RBP3.93□□□□□ -1.78
CCDC66-202ENST00000341455 SMAD4Q13485 552 aaKnown RBP3.93□□□□□ -1.78
CCDC66-202ENST00000341455 BECN1Q14457 450 aa3.93□□□□□ -1.78
CCDC66-202ENST00000341455 LRRC41Q15345 812 aa3.93□□□□□ -1.78
CCDC66-202ENST00000341455 PCBP1Q15365 356 aaKnown RBP eCLIP3.93□□□□□ -1.78
CCDC66-202ENST00000341455 CCL14Q16627 93 aa3.93□□□□□ -1.78
CCDC66-202ENST00000341455 PLA2G4EQ3MJ16 856 aa3.93□□□□□ -1.78
CCDC66-202ENST00000341455 COBLL1Q53SF7 1204 aa3.93□□□□□ -1.78
CCDC66-202ENST00000341455 EARS2Q5JPH6 523 aaKnown RBP3.93□□□□□ -1.78
CCDC66-202ENST00000341455 FAM126BQ8IXS8 530 aa3.93□□□□□ -1.78
CCDC66-202ENST00000341455 DIS3L2Q8IYB7 885 aaKnown RBP3.93□□□□□ -1.78
CCDC66-202ENST00000341455 GPKOWQ92917 476 aaPredicted RBP eCLIP3.93□□□□□ -1.782e-9■■■■□ 21
CCDC66-202ENST00000341455 FERMT2Q96AC1 680 aa3.93□□□□□ -1.78
CCDC66-202ENST00000341455 C8orf76Q96K31 380 aa3.93□□□□□ -1.78
CCDC66-202ENST00000341455 CTAGE1Q96RT6 745 aa3.93□□□□□ -1.78
CCDC66-202ENST00000341455 PCYT2Q99447 389 aa3.93□□□□□ -1.78
CCDC66-202ENST00000341455 IER2Q9BTL4 223 aa3.93□□□□□ -1.78
CCDC66-202ENST00000341455 CCSER1Q9C0I3 900 aa3.93□□□□□ -1.78
CCDC66-202ENST00000341455 CPVLQ9H3G5 476 aa3.93□□□□□ -1.78
CCDC66-202ENST00000341455 MAGEF1Q9HAY2 307 aa3.93□□□□□ -1.78
CCDC66-202ENST00000341455 SPC25Q9HBM1 224 aa3.93□□□□□ -1.78
CCDC66-202ENST00000341455 VPS54Q9P1Q0 977 aa3.93□□□□□ -1.78
CCDC66-202ENST00000341455 RCOR1Q9UKL0 485 aa3.93□□□□□ -1.78
CCDC66-202ENST00000341455 CDV3Q9UKY7 258 aaKnown RBP3.93□□□□□ -1.78
CCDC66-202ENST00000341455 RWDD3Q9Y3V2 267 aa3.93□□□□□ -1.78
CCDC66-202ENST00000341455 GPSM3Q9Y4H4 160 aa3.93□□□□□ -1.78
CCDC66-202ENST00000341455 MICAL3Q7RTP6 2002 aa3.93□□□□□ -1.78
CCDC66-202ENST00000341455 MYH9P35579 1960 aaKnown RBP3.93□□□□□ -1.78
CCDC66-202ENST00000341455 GRIN2DO15399 1336 aa3.93□□□□□ -1.78
CCDC66-202ENST00000341455 PHLPP2Q6ZVD8 1323 aa3.93□□□□□ -1.78
CCDC66-202ENST00000341455 UTRNP46939 3433 aa3.92□□□□□ -1.78
CCDC66-202ENST00000341455 GSTTP1A0A1W2PQM5 241 aa3.92□□□□□ -1.78
CCDC66-202ENST00000341455 SPDYE3A6NKU9 549 aa3.92□□□□□ -1.78
CCDC66-202ENST00000341455 ZBTB42B2RXF5 422 aa3.92□□□□□ -1.78
CCDC66-202ENST00000341455 INPPL1O15357 1258 aa3.92□□□□□ -1.78
CCDC66-202ENST00000341455 MSH4O15457 936 aa3.92□□□□□ -1.78
CCDC66-202ENST00000341455 STX6O43752 255 aa3.92□□□□□ -1.78
CCDC66-202ENST00000341455 FZD6O60353 706 aa3.92□□□□□ -1.78
CCDC66-202ENST00000341455 LPXNO60711 386 aa3.92□□□□□ -1.78
CCDC66-202ENST00000341455 PPFIA4O75335 1185 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms