RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 CCDC181Q5TID7 509 aa16.41■□□□□ 0.22
BRAT1-201ENST00000340611 GIMAP8Q8ND71 665 aaPredicted RBP16.41■□□□□ 0.22
BRAT1-201ENST00000340611 COPS5Q92905 334 aa16.41■□□□□ 0.22
BRAT1-201ENST00000340611 POLR3CQ9BUI4 534 aaPredicted RBP16.41■□□□□ 0.22
BRAT1-201ENST00000340611 MYO1AQ9UBC5 1043 aa16.41■□□□□ 0.22
BRAT1-201ENST00000340611 GRIN2DO15399 1336 aa16.4■□□□□ 0.22
BRAT1-201ENST00000340611 WDR81Q562E7 1941 aa16.4■□□□□ 0.22
BRAT1-201ENST00000340611 EIF4E1BA6NMX2 242 aaKnown RBP16.4■□□□□ 0.22
BRAT1-201ENST00000340611 KCNJ18B7U540 433 aa16.4■□□□□ 0.22
BRAT1-201ENST00000340611 SNUPNO95149 360 aaKnown RBP16.4■□□□□ 0.22
BRAT1-201ENST00000340611 SLC25A27O95847 323 aa16.4■□□□□ 0.22
BRAT1-201ENST00000340611 TUBBP07437 444 aa16.4■□□□□ 0.22
BRAT1-201ENST00000340611 ADORA2AP29274 412 aa16.4■□□□□ 0.22
BRAT1-201ENST00000340611 AARSP49588 968 aaKnown RBP eCLIP16.4■□□□□ 0.22
BRAT1-201ENST00000340611 CASP5P51878 434 aa16.4■□□□□ 0.22
BRAT1-201ENST00000340611 KCNJ12Q14500 433 aa16.4■□□□□ 0.22
BRAT1-201ENST00000340611 EPHA7Q15375 998 aa16.4■□□□□ 0.22
BRAT1-201ENST00000340611 ACCSLQ4AC99 568 aa16.4■□□□□ 0.22
BRAT1-201ENST00000340611 HERC4Q5GLZ8 1057 aaPredicted RBP16.4■□□□□ 0.22
BRAT1-201ENST00000340611 ANKRD23Q86SG2 305 aa16.4■□□□□ 0.22
BRAT1-201ENST00000340611 NELFCDQ8IXH7 590 aa16.4■□□□□ 0.22
BRAT1-201ENST00000340611 CCDC13Q8IYE1 715 aa16.4■□□□□ 0.22
BRAT1-201ENST00000340611 CAGE1Q8TC20 777 aa16.4■□□□□ 0.22
BRAT1-201ENST00000340611 COG1Q8WTW3 980 aa16.4■□□□□ 0.22
BRAT1-201ENST00000340611 CCDC114Q96M63 670 aa16.4■□□□□ 0.22
BRAT1-201ENST00000340611 RMND1Q9NWS8 449 aa16.4■□□□□ 0.22
BRAT1-201ENST00000340611 SAR1BQ9Y6B6 198 aa16.4■□□□□ 0.22
BRAT1-201ENST00000340611 PASKQ96RG2 1323 aa16.4■□□□□ 0.22
BRAT1-201ENST00000340611 TTC26A0AVF1 554 aa16.4■□□□□ 0.22
BRAT1-201ENST00000340611 CYP4F22Q6NT55 531 aa16.4■□□□□ 0.22
BRAT1-201ENST00000340611 UNC13DQ70J99 1090 aa16.4■□□□□ 0.22
BRAT1-201ENST00000340611 NIPA1Q7RTP0 329 aa16.4■□□□□ 0.22
BRAT1-201ENST00000340611 KSR1Q8IVT5 923 aa16.4■□□□□ 0.22
BRAT1-201ENST00000340611 ADSSL1Q8N142 457 aa16.4■□□□□ 0.22
BRAT1-201ENST00000340611 LIMA1Q9UHB6 759 aaKnown RBP16.4■□□□□ 0.22
BRAT1-201ENST00000340611 SOX10P56693 466 aa16.39■□□□□ 0.21
BRAT1-201ENST00000340611 PAK1Q13153 545 aa16.39■□□□□ 0.21
BRAT1-201ENST00000340611 GIT2Q14161 759 aa16.39■□□□□ 0.21
BRAT1-201ENST00000340611 RINT1Q6NUQ1 792 aa16.39■□□□□ 0.21
BRAT1-201ENST00000340611 SWSAP1Q6NVH7 229 aa16.39■□□□□ 0.21
BRAT1-201ENST00000340611 SYT2Q8N9I0 419 aaPredicted RBP16.39■□□□□ 0.21
BRAT1-201ENST00000340611 LMBR1Q8WVP7 490 aa16.39■□□□□ 0.21
BRAT1-201ENST00000340611 YIPF3Q9GZM5 350 aa16.39■□□□□ 0.21
BRAT1-201ENST00000340611 MAGEF1Q9HAY2 307 aa16.39■□□□□ 0.21
BRAT1-201ENST00000340611 AGPSO00116 658 aa16.39■□□□□ 0.21
BRAT1-201ENST00000340611 PYGLP06737 847 aa16.39■□□□□ 0.21
BRAT1-201ENST00000340611 TCP11X2Q5H9J9 407 aa16.39■□□□□ 0.21
BRAT1-201ENST00000340611 FAM228AQ86W67 206 aa16.39■□□□□ 0.21
BRAT1-201ENST00000340611 SAMD3Q8N6K7 520 aa16.39■□□□□ 0.21
BRAT1-201ENST00000340611 GPRASP2Q96D09 838 aa16.39■□□□□ 0.21
BRAT1-201ENST00000340611 VIPAS39Q9H9C1 493 aa16.39■□□□□ 0.21
BRAT1-201ENST00000340611 TBC1D22BQ9NU19 505 aa16.39■□□□□ 0.21
BRAT1-201ENST00000340611 GABBR1Q9UBS5 961 aa16.39■□□□□ 0.21
BRAT1-201ENST00000340611 TAF1CQ15572 869 aaPredicted RBP16.39■□□□□ 0.21
BRAT1-201ENST00000340611 KCTD16Q68DU8 428 aa16.39■□□□□ 0.21
BRAT1-201ENST00000340611 B4GALNT4Q76KP1 1039 aa16.39■□□□□ 0.21
BRAT1-201ENST00000340611 SFR1Q86XK3 245 aa16.39■□□□□ 0.21
BRAT1-201ENST00000340611 CCDC60Q8IWA6 550 aaPredicted RBP16.39■□□□□ 0.21
BRAT1-201ENST00000340611 C3orf20Q8ND61 904 aa16.39■□□□□ 0.21
BRAT1-201ENST00000340611 DNERQ8NFT8 737 aa16.39■□□□□ 0.21
BRAT1-201ENST00000340611 SAAL1Q96ER3 474 aa16.39■□□□□ 0.21
BRAT1-201ENST00000340611 SELENOOQ9BVL4 669 aa16.39■□□□□ 0.21
BRAT1-201ENST00000340611 GOLGA6BA6NDN3 693 aa16.38■□□□□ 0.21
BRAT1-201ENST00000340611 SPATA31C2B4DYI2 1134 aa16.38■□□□□ 0.21
BRAT1-201ENST00000340611 PDE2AO00408 941 aaPredicted RBP16.38■□□□□ 0.21
BRAT1-201ENST00000340611 UPP2O95045 317 aa16.38■□□□□ 0.21
BRAT1-201ENST00000340611 KIF4AO95239 1232 aa16.38■□□□□ 0.21
BRAT1-201ENST00000340611 EYA4O95677 639 aa16.38■□□□□ 0.21
BRAT1-201ENST00000340611 UBA1P22314 1058 aaKnown RBP16.38■□□□□ 0.21
BRAT1-201ENST00000340611 RPS6KA3P51812 740 aa16.38■□□□□ 0.21
BRAT1-201ENST00000340611 C2orf54Q08AI8 447 aa16.38■□□□□ 0.21
BRAT1-201ENST00000340611 ANKRD40Q6AI12 368 aa16.38■□□□□ 0.21
BRAT1-201ENST00000340611 PARP9Q8IXQ6 854 aa16.38■□□□□ 0.21
BRAT1-201ENST00000340611 JPH1Q9HDC5 661 aaPredicted RBP16.38■□□□□ 0.21
BRAT1-201ENST00000340611 TUFT1Q9NNX1 390 aa16.38■□□□□ 0.21
BRAT1-201ENST00000340611 PLXNB2O15031 1838 aa16.38■□□□□ 0.21
BRAT1-201ENST00000340611 DNAJC25-GNG10A0A024R161 153 aa16.38■□□□□ 0.21
BRAT1-201ENST00000340611 ZNF862O60290 1169 aa16.38■□□□□ 0.21
BRAT1-201ENST00000340611 ACTR2P61160 394 aa16.38■□□□□ 0.21
BRAT1-201ENST00000340611 HTRA3P83110 453 aa16.38■□□□□ 0.21
BRAT1-201ENST00000340611 KCNA1Q09470 495 aa16.38■□□□□ 0.21
BRAT1-201ENST00000340611 KIAA1328Q86T90 577 aa16.38■□□□□ 0.21
BRAT1-201ENST00000340611 JAKMIP2Q96AA8 810 aa16.38■□□□□ 0.21
BRAT1-201ENST00000340611 SEMA6BQ9H3T3 888 aa16.38■□□□□ 0.21
BRAT1-201ENST00000340611 DUSP10Q9Y6W6 482 aa16.38■□□□□ 0.21
BRAT1-201ENST00000340611 USO1O60763 962 aaKnown RBP16.37■□□□□ 0.21
BRAT1-201ENST00000340611 P4HBP07237 508 aaKnown RBP16.37■□□□□ 0.21
BRAT1-201ENST00000340611 GNPTABQ3T906 1256 aa16.37■□□□□ 0.21
BRAT1-201ENST00000340611 LACRTQ9GZZ8 138 aa16.37■□□□□ 0.21
BRAT1-201ENST00000340611 MROH8Q9H579 483 aa16.37■□□□□ 0.21
BRAT1-201ENST00000340611 GPRC5CQ9NQ84 441 aa16.37■□□□□ 0.21
BRAT1-201ENST00000340611 SLC9A2Q9UBY0 812 aa16.37■□□□□ 0.21
BRAT1-201ENST00000340611 MYH9P35579 1960 aaKnown RBP16.37■□□□□ 0.21
BRAT1-201ENST00000340611 RCCD1A6NED2 376 aa16.37■□□□□ 0.21
BRAT1-201ENST00000340611 TMCO5BA8MYB1 307 aa16.37■□□□□ 0.21
BRAT1-201ENST00000340611 QARSP47897 775 aaKnown RBP16.37■□□□□ 0.21
BRAT1-201ENST00000340611 SMTNP53814 917 aa16.37■□□□□ 0.21
BRAT1-201ENST00000340611 GPR142Q7Z601 462 aa16.37■□□□□ 0.21
BRAT1-201ENST00000340611 SH2D3CQ8N5H7 860 aa16.37■□□□□ 0.21
BRAT1-201ENST00000340611 IWS1Q96ST2 819 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms