RNA–Protein interactions for RNA: ENST00000340398.4

H3F3C-201, Transcript of H3 histone family member 3C, humanhuman

APPRIS P1 BASIC

Gene H3F3C, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3C-201ENST00000340398 B4GALT3O60512 393 aa18.33■□□□□ 0.52
H3F3C-201ENST00000340398 PDGFBP01127 241 aaPredicted RBP18.33■□□□□ 0.52
H3F3C-201ENST00000340398 GALTP07902 379 aa18.33■□□□□ 0.52
H3F3C-201ENST00000340398 SFPQP23246 707 aaKnown RBP eCLIP18.33■□□□□ 0.52
H3F3C-201ENST00000340398 AFF1P51825 1210 aaKnown RBP18.33■□□□□ 0.52
H3F3C-201ENST00000340398 TCF15Q12870 199 aa18.33■□□□□ 0.52
H3F3C-201ENST00000340398 TPRNQ4KMQ1 711 aa18.33■□□□□ 0.52
H3F3C-201ENST00000340398 NOMO2Q5JPE7 1267 aa18.33■□□□□ 0.52
H3F3C-201ENST00000340398 ZNF410Q86VK4 478 aa18.33■□□□□ 0.52
H3F3C-201ENST00000340398 TMEM143Q96AN5 459 aa18.33■□□□□ 0.52
H3F3C-201ENST00000340398 TRAIPQ9BWF2 469 aa18.33■□□□□ 0.52
H3F3C-201ENST00000340398 MRPL9Q9BYD2 267 aaKnown RBP18.33■□□□□ 0.52
H3F3C-201ENST00000340398 INO80BQ9C086 356 aaPredicted RBP18.33■□□□□ 0.52
H3F3C-201ENST00000340398 GBP3Q9H0R5 595 aa18.33■□□□□ 0.52
H3F3C-201ENST00000340398 IFT122Q9HBG6 1241 aa18.33■□□□□ 0.52
H3F3C-201ENST00000340398 CYP26B1Q9NR63 512 aa18.33■□□□□ 0.52
H3F3C-201ENST00000340398 TBC1D13Q9NVG8 400 aa18.33■□□□□ 0.52
H3F3C-201ENST00000340398 DNAJB4Q9UDY4 337 aa18.33■□□□□ 0.52
H3F3C-201ENST00000340398 C2CD4DB7Z1M9 353 aa18.32■□□□□ 0.52
H3F3C-201ENST00000340398 SRGAP2CP0DJJ0 459 aa18.32■□□□□ 0.52
H3F3C-201ENST00000340398 EPCAMP16422 314 aa18.32■□□□□ 0.52
H3F3C-201ENST00000340398 QARSP47897 775 aaKnown RBP18.32■□□□□ 0.52
H3F3C-201ENST00000340398 RARS2Q5T160 578 aaKnown RBP18.32■□□□□ 0.52
H3F3C-201ENST00000340398 GALNT17Q6IS24 598 aa18.32■□□□□ 0.52
H3F3C-201ENST00000340398 CES5AQ6NT32 575 aa18.32■□□□□ 0.52
H3F3C-201ENST00000340398 MOXD1Q6UVY6 613 aa18.32■□□□□ 0.52
H3F3C-201ENST00000340398 GLB1LQ6UWU2 654 aa18.32■□□□□ 0.52
H3F3C-201ENST00000340398 ZBTB33Q86T24 672 aa18.32■□□□□ 0.52
H3F3C-201ENST00000340398 ZNF280BQ86YH2 543 aa18.32■□□□□ 0.52
H3F3C-201ENST00000340398 KREMEN2Q8NCW0 462 aa18.32■□□□□ 0.52
H3F3C-201ENST00000340398 OXER1Q8TDS5 423 aa18.32■□□□□ 0.52
H3F3C-201ENST00000340398 PRPF31Q8WWY3 499 aaKnown RBP18.32■□□□□ 0.52
H3F3C-201ENST00000340398 IGSF21Q96ID5 467 aa18.32■□□□□ 0.52
H3F3C-201ENST00000340398 ZBP1Q9H171 429 aa18.32■□□□□ 0.52
H3F3C-201ENST00000340398 SMOC2Q9H3U7 446 aa18.32■□□□□ 0.52
H3F3C-201ENST00000340398 MINDY3Q9H8M7 445 aa18.32■□□□□ 0.52
H3F3C-201ENST00000340398 BMP2KQ9NSY1 1161 aaPredicted RBP18.32■□□□□ 0.52
H3F3C-201ENST00000340398 PDRG1Q9NUG6 133 aa18.32■□□□□ 0.52
H3F3C-201ENST00000340398 VAV3Q9UKW4 847 aa18.32■□□□□ 0.52
H3F3C-201ENST00000340398 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.31■□□□□ 0.52
H3F3C-201ENST00000340398 ZBTB39O15060 712 aa18.31■□□□□ 0.52
H3F3C-201ENST00000340398 ZNF623O75123 536 aa18.31■□□□□ 0.52
H3F3C-201ENST00000340398 DDHD2O94830 711 aa18.31■□□□□ 0.52
H3F3C-201ENST00000340398 AVPR2P30518 371 aa18.31■□□□□ 0.52
H3F3C-201ENST00000340398 SLC11A1P49279 550 aa18.31■□□□□ 0.52
H3F3C-201ENST00000340398 RNASELQ05823 741 aaKnown RBP18.31■□□□□ 0.52
H3F3C-201ENST00000340398 SCRN1Q12765 414 aa18.31■□□□□ 0.52
H3F3C-201ENST00000340398 CPLX2Q6PUV4 134 aaKnown RBP18.31■□□□□ 0.52
H3F3C-201ENST00000340398 AGMOQ6ZNB7 445 aa18.31■□□□□ 0.52
H3F3C-201ENST00000340398 KRT25Q7Z3Z0 450 aa18.31■□□□□ 0.52
H3F3C-201ENST00000340398 DDX53Q86TM3 631 aaKnown RBP18.31■□□□□ 0.52
H3F3C-201ENST00000340398 CEP170P1Q96L14 293 aa18.31■□□□□ 0.52
H3F3C-201ENST00000340398 PHF20Q9BVI0 1012 aa18.31■□□□□ 0.52
H3F3C-201ENST00000340398 VN1R3Q9BXE9 311 aa18.31■□□□□ 0.52
H3F3C-201ENST00000340398 TM6SF1Q9BZW5 370 aa18.31■□□□□ 0.52
H3F3C-201ENST00000340398 KCNMB3Q9NPA1 279 aa18.31■□□□□ 0.52
H3F3C-201ENST00000340398 RGL1Q9NZL6 768 aa18.31■□□□□ 0.52
H3F3C-201ENST00000340398 PCDHB2Q9Y5E7 798 aa18.31■□□□□ 0.52
H3F3C-201ENST00000340398 USP34Q70CQ2 3546 aa18.31■□□□□ 0.52
H3F3C-201ENST00000340398 CTSAP10619 480 aa18.3■□□□□ 0.52
H3F3C-201ENST00000340398 SKIP12755 728 aa18.3■□□□□ 0.52
H3F3C-201ENST00000340398 PTPN5P54829 565 aa18.3■□□□□ 0.52
H3F3C-201ENST00000340398 ITIH3Q06033 890 aa18.3■□□□□ 0.52
H3F3C-201ENST00000340398 PPP2R5CQ13362 524 aa18.3■□□□□ 0.52
H3F3C-201ENST00000340398 BMS1Q14692 1282 aaKnown RBP18.3■□□□□ 0.52
H3F3C-201ENST00000340398 EARS2Q5JPH6 523 aaKnown RBP18.3■□□□□ 0.52
H3F3C-201ENST00000340398 TMEM87AQ8NBN3 555 aa18.3■□□□□ 0.52
H3F3C-201ENST00000340398 SLC22A17Q8WUG5 538 aa18.3■□□□□ 0.52
H3F3C-201ENST00000340398 HAS1Q92839 578 aa18.3■□□□□ 0.52
H3F3C-201ENST00000340398 NR2E1Q9Y466 385 aa18.3■□□□□ 0.52
H3F3C-201ENST00000340398 COL4A3BPQ9Y5P4 624 aa18.3■□□□□ 0.52
H3F3C-201ENST00000340398 KMT2EQ8IZD2 1858 aa18.3■□□□□ 0.52
H3F3C-201ENST00000340398 CCDC194A0A1B0GVG4 234 aa18.29■□□□□ 0.52
H3F3C-201ENST00000340398 CCNT1O60563 726 aaKnown RBP18.29■□□□□ 0.52
H3F3C-201ENST00000340398 BRD1O95696 1058 aa18.29■□□□□ 0.52
H3F3C-201ENST00000340398 P4HBP07237 508 aaKnown RBP18.29■□□□□ 0.52
H3F3C-201ENST00000340398 ASGR2P07307 311 aa18.29■□□□□ 0.52
H3F3C-201ENST00000340398 HOXA11P31270 313 aaPredicted RBP18.29■□□□□ 0.52
H3F3C-201ENST00000340398 UBXN11Q5T124 520 aa18.29■□□□□ 0.52
H3F3C-201ENST00000340398 PIK3AP1Q6ZUJ8 805 aa18.29■□□□□ 0.52
H3F3C-201ENST00000340398 RIPOR3Q96MK2 946 aa18.29■□□□□ 0.52
H3F3C-201ENST00000340398 FAM20AQ96MK3 541 aa18.29■□□□□ 0.52
H3F3C-201ENST00000340398 JPH2Q9BR39 696 aaPredicted RBP18.29■□□□□ 0.52
H3F3C-201ENST00000340398 DHX33Q9H6R0 707 aaKnown RBP18.29■□□□□ 0.52
H3F3C-201ENST00000340398 AGPAT5Q9NUQ2 364 aa18.29■□□□□ 0.52
H3F3C-201ENST00000340398 FAM86C1Q9NVL1 165 aa18.29■□□□□ 0.52
H3F3C-201ENST00000340398 LIMD1Q9UGP4 676 aa18.29■□□□□ 0.52
H3F3C-201ENST00000340398 EPB41L2O43491 1005 aaKnown RBP18.28■□□□□ 0.52
H3F3C-201ENST00000340398 SSBP05455 408 aaKnown RBP eCLIP18.28■□□□□ 0.52
H3F3C-201ENST00000340398 POLGP54098 1239 aaPredicted RBP18.28■□□□□ 0.52
H3F3C-201ENST00000340398 LAMTOR4Q0VGL1 99 aa18.28■□□□□ 0.52
H3F3C-201ENST00000340398 CTTNQ14247 550 aaKnown RBP18.28■□□□□ 0.52
H3F3C-201ENST00000340398 ATAT1Q5SQI0 421 aa18.28■□□□□ 0.52
H3F3C-201ENST00000340398 PPP4R3AQ6IN85 833 aa18.28■□□□□ 0.52
H3F3C-201ENST00000340398 TMC5Q6UXY8 1006 aa18.28■□□□□ 0.52
H3F3C-201ENST00000340398 MRPL10Q7Z7H8 261 aaKnown RBP18.28■□□□□ 0.52
H3F3C-201ENST00000340398 NEK8Q86SG6 692 aa18.28■□□□□ 0.52
H3F3C-201ENST00000340398 SLC7A3Q8WY07 619 aa18.28■□□□□ 0.52
H3F3C-201ENST00000340398 PGBD4Q96DM1 585 aa18.28■□□□□ 0.52
H3F3C-201ENST00000340398 DYDC2Q96IM9 177 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms