RNA–Protein interactions for RNA: ENST00000339717.11

BRPF3-201, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 5 BASIC

Gene BRPF3, Length 4,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-201ENST00000339717 DDX56Q9NY93 547 aaKnown RBP13.43□□□□□ -0.26
BRPF3-201ENST00000339717 PHF24Q9UPV7 400 aa13.43□□□□□ -0.26
BRPF3-201ENST00000339717 SNX24Q9Y343 169 aa13.43□□□□□ -0.26
BRPF3-201ENST00000339717 ARHGAP31Q2M1Z3 1444 aa13.43□□□□□ -0.26
BRPF3-201ENST00000339717 A0A1B0GTH6 734 aa13.43□□□□□ -0.26
BRPF3-201ENST00000339717 GOLGA8MH3BSY2 632 aa13.43□□□□□ -0.26
BRPF3-201ENST00000339717 PALMO75781 387 aa13.43□□□□□ -0.26
BRPF3-201ENST00000339717 ENO2P09104 434 aaPredicted RBP13.43□□□□□ -0.26
BRPF3-201ENST00000339717 CDK7P50613 346 aa13.43□□□□□ -0.26
BRPF3-201ENST00000339717 PARP6Q2NL67 630 aa13.43□□□□□ -0.26
BRPF3-201ENST00000339717 ZCCHC7Q8N3Z6 543 aaKnown RBP13.43□□□□□ -0.26
BRPF3-201ENST00000339717 DPF2Q92785 391 aa13.43□□□□□ -0.26
BRPF3-201ENST00000339717 IQANK1A0A1B0GTG1 560 aa13.43□□□□□ -0.26
BRPF3-201ENST00000339717 TTI1O43156 1089 aa13.43□□□□□ -0.26
BRPF3-201ENST00000339717 GAS7O60861 476 aa13.43□□□□□ -0.26
BRPF3-201ENST00000339717 POLGP54098 1239 aaPredicted RBP13.43□□□□□ -0.26
BRPF3-201ENST00000339717 PRR23BQ6ZRT6 265 aa13.43□□□□□ -0.26
BRPF3-201ENST00000339717 MIGA2Q7L4E1 593 aa13.43□□□□□ -0.26
BRPF3-201ENST00000339717 ADAT2Q7Z6V5 191 aaKnown RBP13.43□□□□□ -0.26
BRPF3-201ENST00000339717 PLD3Q8IV08 490 aa13.43□□□□□ -0.26
BRPF3-201ENST00000339717 CHCHD4Q8N4Q1 142 aa13.43□□□□□ -0.26
BRPF3-201ENST00000339717 APPBP2Q92624 585 aa13.43□□□□□ -0.26
BRPF3-201ENST00000339717 KIFC2Q96AC6 838 aa13.43□□□□□ -0.26
BRPF3-201ENST00000339717 CMTM5Q96DZ9 223 aa13.43□□□□□ -0.26
BRPF3-201ENST00000339717 TMEM87BQ96K49 555 aa13.43□□□□□ -0.26
BRPF3-201ENST00000339717 OLFM1Q99784 485 aa13.43□□□□□ -0.26
BRPF3-201ENST00000339717 SLC5A4Q9NY91 659 aa13.43□□□□□ -0.26
BRPF3-201ENST00000339717 TMEM120BA0PK00 339 aa13.42□□□□□ -0.26
BRPF3-201ENST00000339717 TEX28O15482 410 aa13.42□□□□□ -0.26
BRPF3-201ENST00000339717 KLHL41O60662 606 aa13.42□□□□□ -0.26
BRPF3-201ENST00000339717 CALM1P0DP23 149 aa13.42□□□□□ -0.26
BRPF3-201ENST00000339717 CALM2P0DP24 149 aa13.42□□□□□ -0.26
BRPF3-201ENST00000339717 CALM3P0DP25 149 aa13.42□□□□□ -0.26
BRPF3-201ENST00000339717 ETS2P15036 469 aa13.42□□□□□ -0.26
BRPF3-201ENST00000339717 DAB2P98082 770 aa13.42□□□□□ -0.26
BRPF3-201ENST00000339717 RBM44Q6ZP01 1051 aaKnown RBP13.42□□□□□ -0.26
BRPF3-201ENST00000339717 MDM1Q8TC05 714 aa13.42□□□□□ -0.26
BRPF3-201ENST00000339717 ARHGEF1Q92888 912 aaKnown RBP13.42□□□□□ -0.26
BRPF3-201ENST00000339717 PHACTR3Q96KR7 559 aa13.42□□□□□ -0.26
BRPF3-201ENST00000339717 SPATA16Q9BXB7 569 aa13.42□□□□□ -0.26
BRPF3-201ENST00000339717 IPPQ9Y573 584 aa13.42□□□□□ -0.26
BRPF3-201ENST00000339717 ERBB3P21860 1342 aa13.42□□□□□ -0.26
BRPF3-201ENST00000339717 ZNF185O15231 689 aa13.42□□□□□ -0.26
BRPF3-201ENST00000339717 HOXA7P31268 230 aaPredicted RBP13.42□□□□□ -0.26
BRPF3-201ENST00000339717 HOXD12P35452 270 aa13.42□□□□□ -0.26
BRPF3-201ENST00000339717 CNPY1Q3B7I2 92 aa13.42□□□□□ -0.26
BRPF3-201ENST00000339717 TMTC4Q5T4D3 741 aa13.42□□□□□ -0.26
BRPF3-201ENST00000339717 KRT79Q5XKE5 535 aa13.42□□□□□ -0.26
BRPF3-201ENST00000339717 OR2W6PQ8NHA6 318 aa13.42□□□□□ -0.26
BRPF3-201ENST00000339717 TIPINQ9BVW5 301 aa13.42□□□□□ -0.26
BRPF3-201ENST00000339717 UBN1Q9NPG3 1134 aa13.42□□□□□ -0.26
BRPF3-201ENST00000339717 RTL9Q8NET4 1388 aa13.42□□□□□ -0.26
BRPF3-201ENST00000339717 A0A1W2PQC6 194 aa13.42□□□□□ -0.26
BRPF3-201ENST00000339717 CFLARO15519 480 aa13.42□□□□□ -0.26
BRPF3-201ENST00000339717 LDHBP07195 334 aaKnown RBP13.42□□□□□ -0.26
BRPF3-201ENST00000339717 TNNI2P48788 182 aa13.42□□□□□ -0.26
BRPF3-201ENST00000339717 AKR1D1P51857 326 aa13.42□□□□□ -0.26
BRPF3-201ENST00000339717 STAT4Q14765 748 aa13.42□□□□□ -0.26
BRPF3-201ENST00000339717 C8orf58Q8NAV2 365 aa13.42□□□□□ -0.26
BRPF3-201ENST00000339717 ITPKCQ96DU7 683 aa13.42□□□□□ -0.26
BRPF3-201ENST00000339717 CNOT6LQ96LI5 555 aaKnown RBP13.42□□□□□ -0.26
BRPF3-201ENST00000339717 MAGEB18Q96M61 343 aa13.42□□□□□ -0.26
BRPF3-201ENST00000339717 TEX14Q8IWB6 1497 aa13.42□□□□□ -0.26
BRPF3-201ENST00000339717 COL17A1Q9UMD9 1497 aaPredicted RBP13.42□□□□□ -0.26
BRPF3-201ENST00000339717 C1orf232A0A0U1RR37 186 aa13.42□□□□□ -0.26
BRPF3-201ENST00000339717 FAM47DPA6NHR8 397 aa13.42□□□□□ -0.26
BRPF3-201ENST00000339717 DTNBO60941 627 aa13.42□□□□□ -0.26
BRPF3-201ENST00000339717 PSMG1O95456 288 aa13.42□□□□□ -0.26
BRPF3-201ENST00000339717 RPN1P04843 607 aaKnown RBP13.42□□□□□ -0.26
BRPF3-201ENST00000339717 TRIM49P0CI25 452 aa13.42□□□□□ -0.26
BRPF3-201ENST00000339717 TRIM49CP0CI26 452 aa13.42□□□□□ -0.26
BRPF3-201ENST00000339717 NCF2P19878 526 aaPredicted RBP13.42□□□□□ -0.26
BRPF3-201ENST00000339717 STIP1P31948 543 aaKnown RBP13.42□□□□□ -0.26
BRPF3-201ENST00000339717 ITGADQ13349 1161 aa13.42□□□□□ -0.26
BRPF3-201ENST00000339717 ZNF268Q14587 947 aaPredicted RBP13.42□□□□□ -0.26
BRPF3-201ENST00000339717 CYP4F22Q6NT55 531 aa13.42□□□□□ -0.26
BRPF3-201ENST00000339717 HDDC2Q7Z4H3 204 aa13.42□□□□□ -0.26
BRPF3-201ENST00000339717 NOSTRINQ8IVI9 506 aa13.42□□□□□ -0.26
BRPF3-201ENST00000339717 KSR1Q8IVT5 923 aa13.42□□□□□ -0.26
BRPF3-201ENST00000339717 BLZF1Q9H2G9 400 aa13.42□□□□□ -0.26
BRPF3-201ENST00000339717 RNPEPQ9H4A4 650 aa13.42□□□□□ -0.26
BRPF3-201ENST00000339717 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.42□□□□□ -0.26
BRPF3-201ENST00000339717 MBD2Q9UBB5 411 aa13.42□□□□□ -0.26
BRPF3-201ENST00000339717 STOML2Q9UJZ1 356 aa13.42□□□□□ -0.26
BRPF3-201ENST00000339717 DAPK3O43293 454 aa13.41□□□□□ -0.26
BRPF3-201ENST00000339717 XIAPP98170 497 aa13.41□□□□□ -0.26
BRPF3-201ENST00000339717 LPIN2Q92539 896 aa13.41□□□□□ -0.26
BRPF3-201ENST00000339717 SUN2Q9UH99 717 aa13.41□□□□□ -0.26
BRPF3-201ENST00000339717 LGALS16A8MUM7 142 aa13.41□□□□□ -0.26
BRPF3-201ENST00000339717 CCR3P51677 355 aa13.41□□□□□ -0.26
BRPF3-201ENST00000339717 ZNF174Q15697 407 aa13.41□□□□□ -0.26
BRPF3-201ENST00000339717 TTC38Q5R3I4 469 aa13.41□□□□□ -0.26
BRPF3-201ENST00000339717 TTC33Q6PID6 262 aaPredicted RBP13.41□□□□□ -0.26
BRPF3-201ENST00000339717 KCNH5Q8NCM2 988 aa13.41□□□□□ -0.26
BRPF3-201ENST00000339717 HPS1Q92902 700 aa13.41□□□□□ -0.26
BRPF3-201ENST00000339717 CHID1Q9BWS9 393 aa13.41□□□□□ -0.26
BRPF3-201ENST00000339717 HERC5Q9UII4 1024 aaKnown RBP13.41□□□□□ -0.26
BRPF3-201ENST00000339717 NUP160Q12769 1436 aa13.41□□□□□ -0.26
BRPF3-201ENST00000339717 PRR23AA6NEV1 266 aa13.41□□□□□ -0.26
BRPF3-201ENST00000339717 CDH16O75309 829 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms