RNA–Protein interactions for RNA: ENST00000339598.7

OTOF-203, Transcript of otoferlin, humanhuman

TSL 1 (best) BASIC

Gene OTOF, Length 4,756 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTOF-203ENST00000339598 EEF1B2P24534 225 aaKnown RBP13.32□□□□□ -0.28
OTOF-203ENST00000339598 EPHB1P54762 984 aa13.32□□□□□ -0.28
OTOF-203ENST00000339598 SPP2Q13103 211 aa13.32□□□□□ -0.28
OTOF-203ENST00000339598 LRRC14Q15048 493 aa13.32□□□□□ -0.28
OTOF-203ENST00000339598 C12orf60Q5U649 245 aa13.32□□□□□ -0.28
OTOF-203ENST00000339598 RNF168Q8IYW5 571 aaPredicted RBP13.32□□□□□ -0.28
OTOF-203ENST00000339598 PSPC1Q8WXF1 523 aaKnown RBP13.32□□□□□ -0.28
OTOF-203ENST00000339598 DRC3Q9H069 523 aa13.32□□□□□ -0.28
OTOF-203ENST00000339598 RNF146Q9NTX7 359 aa13.32□□□□□ -0.28
OTOF-203ENST00000339598 USP11P51784 963 aa13.32□□□□□ -0.28
OTOF-203ENST00000339598 ZNF568Q3ZCX4 644 aa13.32□□□□□ -0.28
OTOF-203ENST00000339598 TAF1BQ53T94 588 aaPredicted RBP13.32□□□□□ -0.28
OTOF-203ENST00000339598 RWDD4Q6NW29 188 aaKnown RBP13.32□□□□□ -0.28
OTOF-203ENST00000339598 SEPT12Q8IYM1 358 aa13.32□□□□□ -0.28
OTOF-203ENST00000339598 IGDCC4Q8TDY8 1250 aa13.32□□□□□ -0.28
OTOF-203ENST00000339598 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.32□□□□□ -0.28
OTOF-203ENST00000339598 LRRC37BQ96QE4 947 aa13.32□□□□□ -0.28
OTOF-203ENST00000339598 TTC1Q99614 292 aa13.32□□□□□ -0.28
OTOF-203ENST00000339598 LXNQ9BS40 222 aa13.32□□□□□ -0.28
OTOF-203ENST00000339598 EMSYQ7Z589 1322 aa13.32□□□□□ -0.28
OTOF-203ENST00000339598 FAM187AA6NFU0 413 aa13.32□□□□□ -0.28
OTOF-203ENST00000339598 GPS1Q13098 491 aa13.32□□□□□ -0.28
OTOF-203ENST00000339598 LCA5Q86VQ0 697 aa13.32□□□□□ -0.28
OTOF-203ENST00000339598 RTKN2Q8IZC4 609 aa13.32□□□□□ -0.28
OTOF-203ENST00000339598 UPF3AQ9H1J1 476 aaKnown RBP13.32□□□□□ -0.28
OTOF-203ENST00000339598 VPS11Q9H270 941 aa13.32□□□□□ -0.28
OTOF-203ENST00000339598 GABBR1Q9UBS5 961 aa13.32□□□□□ -0.28
OTOF-203ENST00000339598 ZHX2Q9Y6X8 837 aa13.32□□□□□ -0.28
OTOF-203ENST00000339598 ABCA8O94911 1581 aa13.32□□□□□ -0.28
OTOF-203ENST00000339598 SNRNP48Q6IEG0 339 aaKnown RBP13.32□□□□□ -0.28
OTOF-203ENST00000339598 SWSAP1Q6NVH7 229 aa13.32□□□□□ -0.28
OTOF-203ENST00000339598 NLRP14Q86W24 1093 aa13.32□□□□□ -0.28
OTOF-203ENST00000339598 ADSSL1Q8N142 457 aa13.32□□□□□ -0.28
OTOF-203ENST00000339598 MARCH10Q8NA82 808 aaPredicted RBP13.32□□□□□ -0.28
OTOF-203ENST00000339598 ASNSD1Q9NWL6 643 aa13.32□□□□□ -0.28
OTOF-203ENST00000339598 STRIP2Q9ULQ0 834 aa13.32□□□□□ -0.28
OTOF-203ENST00000339598 APOBEC2Q9Y235 224 aaKnown RBP13.32□□□□□ -0.28
OTOF-203ENST00000339598 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.32□□□□□ -0.28
OTOF-203ENST00000339598 UBE4BO95155 1302 aa13.31□□□□□ -0.28
OTOF-203ENST00000339598 ARHGEF37A1IGU5 675 aa13.31□□□□□ -0.28
OTOF-203ENST00000339598 HAUS6Q7Z4H7 955 aa13.31□□□□□ -0.28
OTOF-203ENST00000339598 RNPC3Q96LT9 517 aaKnown RBP13.31□□□□□ -0.28
OTOF-203ENST00000339598 TTC25Q96NG3 672 aa13.31□□□□□ -0.28
OTOF-203ENST00000339598 EIF2AK1Q9BQI3 630 aaKnown RBP13.31□□□□□ -0.28
OTOF-203ENST00000339598 UBN1Q9NPG3 1134 aa13.31□□□□□ -0.28
OTOF-203ENST00000339598 RGL1Q9NZL6 768 aa13.31□□□□□ -0.28
OTOF-203ENST00000339598 NVLO15381 856 aaKnown RBP13.31□□□□□ -0.28
OTOF-203ENST00000339598 CTIFO43310 598 aaKnown RBP13.31□□□□□ -0.28
OTOF-203ENST00000339598 SDC4P31431 198 aa13.31□□□□□ -0.28
OTOF-203ENST00000339598 KCNJ6P48051 423 aa13.31□□□□□ -0.28
OTOF-203ENST00000339598 ICE2Q659A1 982 aa13.31□□□□□ -0.28
OTOF-203ENST00000339598 KLC3Q6P597 504 aa13.31□□□□□ -0.28
OTOF-203ENST00000339598 PRPF38AQ8NAV1 312 aaKnown RBP13.31□□□□□ -0.28
OTOF-203ENST00000339598 C1orf54Q8WWF1 131 aa13.31□□□□□ -0.28
OTOF-203ENST00000339598 NCAPGQ9BPX3 1015 aa13.31□□□□□ -0.28
OTOF-203ENST00000339598 ETNK1Q9HBU6 452 aa13.31□□□□□ -0.28
OTOF-203ENST00000339598 ZNF185O15231 689 aa13.31□□□□□ -0.28
OTOF-203ENST00000339598 PSMC1P62191 440 aaKnown RBP13.31□□□□□ -0.28
OTOF-203ENST00000339598 GPSM2P81274 684 aa13.31□□□□□ -0.28
OTOF-203ENST00000339598 STK4Q13043 487 aa13.31□□□□□ -0.28
OTOF-203ENST00000339598 RHOT1Q8IXI2 618 aa13.31□□□□□ -0.28
OTOF-203ENST00000339598 EXT2Q93063 718 aa13.31□□□□□ -0.28
OTOF-203ENST00000339598 ZNF668Q96K58 619 aaPredicted RBP13.31□□□□□ -0.28
OTOF-203ENST00000339598 FAM167AQ96KS9 214 aa13.31□□□□□ -0.28
OTOF-203ENST00000339598 AGPAT5Q9NUQ2 364 aa13.31□□□□□ -0.28
OTOF-203ENST00000339598 COL15A1P39059 1388 aa13.31□□□□□ -0.28
OTOF-203ENST00000339598 SETD1BQ9UPS6 1966 aaKnown RBP13.31□□□□□ -0.28
OTOF-203ENST00000339598 KRT10P13645 584 aa13.31□□□□□ -0.28
OTOF-203ENST00000339598 MDM2Q00987 491 aaPredicted RBP13.31□□□□□ -0.28
OTOF-203ENST00000339598 PDIA5Q14554 519 aa13.31□□□□□ -0.28
OTOF-203ENST00000339598 TRMT10CQ7L0Y3 403 aaKnown RBP13.31□□□□□ -0.28
OTOF-203ENST00000339598 FBXL13Q8NEE6 735 aa13.31□□□□□ -0.28
OTOF-203ENST00000339598 TOPORSQ9NS56 1045 aaPredicted RBP13.31□□□□□ -0.28
OTOF-203ENST00000339598 TAF6LQ9Y6J9 622 aa13.31□□□□□ -0.28
OTOF-203ENST00000339598 NMT1P30419 496 aaKnown RBP13.3□□□□□ -0.28
OTOF-203ENST00000339598 GNA15P30679 374 aa13.3□□□□□ -0.28
OTOF-203ENST00000339598 SOX5P35711 763 aa13.3□□□□□ -0.28
OTOF-203ENST00000339598 ACTN3Q08043 901 aaPredicted RBP13.3□□□□□ -0.28
OTOF-203ENST00000339598 KLHL38Q2WGJ6 581 aa13.3□□□□□ -0.28
OTOF-203ENST00000339598 ARHGEF1Q92888 912 aaKnown RBP13.3□□□□□ -0.28
OTOF-203ENST00000339598 KRT82Q9NSB4 513 aa13.3□□□□□ -0.28
OTOF-203ENST00000339598 SLC9A2Q9UBY0 812 aa13.3□□□□□ -0.28
OTOF-203ENST00000339598 TUBE1Q9UJT0 475 aa13.3□□□□□ -0.28
OTOF-203ENST00000339598 FEM1BQ9UK73 627 aa13.3□□□□□ -0.28
OTOF-203ENST00000339598 ORC6Q9Y5N6 252 aa13.3□□□□□ -0.28
OTOF-203ENST00000339598 ZNF609O15014 1411 aa13.3□□□□□ -0.28
OTOF-203ENST00000339598 ATP5HO75947 161 aa13.3□□□□□ -0.28
OTOF-203ENST00000339598 HAUS5O94927 633 aa13.3□□□□□ -0.28
OTOF-203ENST00000339598 BCAR1P56945 870 aa13.3□□□□□ -0.28
OTOF-203ENST00000339598 GUCY1A3Q02108 690 aa13.3□□□□□ -0.28
OTOF-203ENST00000339598 FRMD5Q7Z6J6 570 aa13.3□□□□□ -0.28
OTOF-203ENST00000339598 ZC3H18Q86VM9 953 aaKnown RBP13.3□□□□□ -0.28
OTOF-203ENST00000339598 NSUN4Q96CB9 384 aaKnown RBP13.3□□□□□ -0.28
OTOF-203ENST00000339598 HOXC10Q9NYD6 342 aa13.3□□□□□ -0.28
OTOF-203ENST00000339598 STOML1Q9UBI4 398 aa13.3□□□□□ -0.28
OTOF-203ENST00000339598 PFASO15067 1338 aa13.3□□□□□ -0.28
OTOF-203ENST00000339598 USP42Q9H9J4 1324 aaKnown RBP13.3□□□□□ -0.28
OTOF-203ENST00000339598 TARSL2A2RTX5 802 aaKnown RBP13.3□□□□□ -0.28
OTOF-203ENST00000339598 PDXKO00764 312 aa13.3□□□□□ -0.28
OTOF-203ENST00000339598 SPAG7O75391 227 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms