RNA–Protein interactions for RNA: ENST00000339350.7

DFFB-202, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 3,005 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-202ENST00000339350 MMEP08473 750 aa13.56□□□□□ -0.24
DFFB-202ENST00000339350 ETS2P15036 469 aa13.56□□□□□ -0.24
DFFB-202ENST00000339350 TCP1P17987 556 aaKnown RBP13.56□□□□□ -0.24
DFFB-202ENST00000339350 GNAZP19086 355 aa13.56□□□□□ -0.24
DFFB-202ENST00000339350 TNNI2P48788 182 aa13.56□□□□□ -0.24
DFFB-202ENST00000339350 RAPGEF1Q13905 1077 aa13.56□□□□□ -0.24
DFFB-202ENST00000339350 CALCRLQ16602 461 aa13.56□□□□□ -0.24
DFFB-202ENST00000339350 UBE2SQ16763 222 aa13.56□□□□□ -0.24
DFFB-202ENST00000339350 LSM14BQ9BX40 385 aaKnown RBP13.56□□□□□ -0.24
DFFB-202ENST00000339350 ZMYND12Q9H0C1 365 aa13.56□□□□□ -0.24
DFFB-202ENST00000339350 C6orf50Q9HD87 102 aa13.56□□□□□ -0.24
DFFB-202ENST00000339350 SEC63Q9UGP8 760 aaKnown RBP13.56□□□□□ -0.24
DFFB-202ENST00000339350 ADAMTS1Q9UHI8 967 aa13.56□□□□□ -0.24
DFFB-202ENST00000339350 GOLGA6L10A0A0M3HER8 536 aa13.56□□□□□ -0.24
DFFB-202ENST00000339350 CETN3O15182 167 aa13.56□□□□□ -0.24
DFFB-202ENST00000339350 TLR2O60603 784 aa13.56□□□□□ -0.24
DFFB-202ENST00000339350 OXCT1P55809 520 aa13.56□□□□□ -0.24
DFFB-202ENST00000339350 NOX5Q96PH1 765 aa13.56□□□□□ -0.24
DFFB-202ENST00000339350 EYA3Q99504 573 aa13.56□□□□□ -0.24
DFFB-202ENST00000339350 ETNK2Q9NVF9 386 aa13.56□□□□□ -0.24
DFFB-202ENST00000339350 NOVA2Q9UNW9 492 aaKnown RBP13.56□□□□□ -0.24
DFFB-202ENST00000339350 TRIM43BA6NCK2 446 aa13.56□□□□□ -0.24
DFFB-202ENST00000339350 CCDC166P0CW27 439 aa13.56□□□□□ -0.24
DFFB-202ENST00000339350 SMARCA1P28370 1054 aa13.56□□□□□ -0.24
DFFB-202ENST00000339350 PEX5P50542 639 aa13.56□□□□□ -0.24
DFFB-202ENST00000339350 PDXDC1Q6P996 788 aa13.56□□□□□ -0.24
DFFB-202ENST00000339350 KRT25Q7Z3Z0 450 aa13.56□□□□□ -0.24
DFFB-202ENST00000339350 DDX42Q86XP3 938 aaKnown RBP eCLIP13.56□□□□□ -0.24
DFFB-202ENST00000339350 REXO1Q8N1G1 1221 aaKnown RBP13.56□□□□□ -0.24
DFFB-202ENST00000339350 LRRC47Q8N1G4 583 aaKnown RBP13.56□□□□□ -0.24
DFFB-202ENST00000339350 FAM133AQ8N9E0 248 aa13.56□□□□□ -0.24
DFFB-202ENST00000339350 GBP5Q96PP8 586 aa13.56□□□□□ -0.24
DFFB-202ENST00000339350 ELAC2Q9BQ52 826 aaKnown RBP13.56□□□□□ -0.24
DFFB-202ENST00000339350 KIAA1551Q9HCM1 1747 aa13.55□□□□□ -0.24
DFFB-202ENST00000339350 AFF2P51816 1311 aa13.55□□□□□ -0.24
DFFB-202ENST00000339350 LAMB1P07942 1786 aa13.55□□□□□ -0.24
DFFB-202ENST00000339350 SCN7AQ01118 1682 aa13.55□□□□□ -0.24
DFFB-202ENST00000339350 CTNND1O60716 968 aaKnown RBP13.55□□□□□ -0.24
DFFB-202ENST00000339350 SLURP2P0DP57 97 aa13.55□□□□□ -0.24
DFFB-202ENST00000339350 TM4SF1P30408 202 aa13.55□□□□□ -0.24
DFFB-202ENST00000339350 HDAC4P56524 1084 aa13.55□□□□□ -0.24
DFFB-202ENST00000339350 CNPY1Q3B7I2 92 aa13.55□□□□□ -0.24
DFFB-202ENST00000339350 TRAPPC3LQ5T215 181 aa13.55□□□□□ -0.24
DFFB-202ENST00000339350 HGSNATQ68CP4 663 aa13.55□□□□□ -0.24
DFFB-202ENST00000339350 DUS1LQ6P1R4 473 aaKnown RBP13.55□□□□□ -0.24
DFFB-202ENST00000339350 RUBCNQ92622 972 aa13.55□□□□□ -0.24
DFFB-202ENST00000339350 CEP95Q96GE4 821 aa13.55□□□□□ -0.24
DFFB-202ENST00000339350 CLMNQ96JQ2 1002 aa13.55□□□□□ -0.24
DFFB-202ENST00000339350 SHBGP04278 402 aa13.55□□□□□ -0.24
DFFB-202ENST00000339350 HSPA1LP34931 641 aa13.55□□□□□ -0.24
DFFB-202ENST00000339350 HOXD12P35452 270 aa13.55□□□□□ -0.24
DFFB-202ENST00000339350 LRRC55Q6ZSA7 311 aa13.55□□□□□ -0.24
DFFB-202ENST00000339350 ARHGAP18Q8N392 663 aa13.55□□□□□ -0.24
DFFB-202ENST00000339350 DAGLBQ8NCG7 672 aa13.55□□□□□ -0.24
DFFB-202ENST00000339350 AK8Q96MA6 479 aa13.55□□□□□ -0.24
DFFB-202ENST00000339350 XPO6Q96QU8 1125 aaKnown RBP13.55□□□□□ -0.24
DFFB-202ENST00000339350 INIPQ9NRY2 104 aa13.55□□□□□ -0.24
DFFB-202ENST00000339350 SPO11Q9Y5K1 396 aa13.55□□□□□ -0.24
DFFB-202ENST00000339350 A0A087X0T9 212 aa13.54□□□□□ -0.24
DFFB-202ENST00000339350 LAD1O00515 517 aa13.54□□□□□ -0.24
DFFB-202ENST00000339350 TIMM44O43615 452 aa13.54□□□□□ -0.24
DFFB-202ENST00000339350 MARCH6O60337 910 aa13.54□□□□□ -0.24
DFFB-202ENST00000339350 FAM228BP0C875 321 aa13.54□□□□□ -0.24
DFFB-202ENST00000339350 MLH1P40692 756 aa13.54□□□□□ -0.24
DFFB-202ENST00000339350 CDK17Q00537 523 aa13.54□□□□□ -0.24
DFFB-202ENST00000339350 HLTFQ14527 1009 aaKnown RBP eCLIP13.54□□□□□ -0.24
DFFB-202ENST00000339350 CFAP221Q4G0U5 840 aa13.54□□□□□ -0.24
DFFB-202ENST00000339350 FIGNQ5HY92 759 aa13.54□□□□□ -0.24
DFFB-202ENST00000339350 OLFML2BQ68BL8 750 aa13.54□□□□□ -0.24
DFFB-202ENST00000339350 UNC13DQ70J99 1090 aa13.54□□□□□ -0.24
DFFB-202ENST00000339350 IFT20Q8IY31 132 aa13.54□□□□□ -0.24
DFFB-202ENST00000339350 C1orf131Q8NDD1 294 aaKnown RBP13.54□□□□□ -0.24
DFFB-202ENST00000339350 WDR66Q8TBY9 1149 aa13.54□□□□□ -0.24
DFFB-202ENST00000339350 CASKIN2Q8WXE0 1202 aa13.54□□□□□ -0.24
DFFB-202ENST00000339350 CUEDC2Q9H467 287 aa13.54□□□□□ -0.24
DFFB-202ENST00000339350 PAEPP09466 180 aa13.54□□□□□ -0.24
DFFB-202ENST00000339350 ACTN1P12814 892 aa13.54□□□□□ -0.24
DFFB-202ENST00000339350 ZFXP17010 805 aaPredicted RBP13.54□□□□□ -0.24
DFFB-202ENST00000339350 CDK8P49336 464 aa13.54□□□□□ -0.24
DFFB-202ENST00000339350 CACNA2D1P54289 1103 aa13.54□□□□□ -0.24
DFFB-202ENST00000339350 MAGOHP61326 146 aaKnown RBP13.54□□□□□ -0.24
DFFB-202ENST00000339350 RNASELQ05823 741 aaKnown RBP13.54□□□□□ -0.24
DFFB-202ENST00000339350 FAM83BQ5T0W9 1011 aa13.54□□□□□ -0.24
DFFB-202ENST00000339350 TRIM50Q86XT4 487 aa13.54□□□□□ -0.24
DFFB-202ENST00000339350 SEPT12Q8IYM1 358 aa13.54□□□□□ -0.24
DFFB-202ENST00000339350 DNAJC9Q8WXX5 260 aa13.54□□□□□ -0.24
DFFB-202ENST00000339350 MAGOHBQ96A72 148 aaKnown RBP13.54□□□□□ -0.24
DFFB-202ENST00000339350 HIC2Q96JB3 615 aa13.54□□□□□ -0.24
DFFB-202ENST00000339350 E9PMD0 336 aa13.53□□□□□ -0.24
DFFB-202ENST00000339350 LMNB1P20700 586 aa13.53□□□□□ -0.24
DFFB-202ENST00000339350 GNA11P29992 359 aa13.53□□□□□ -0.24
DFFB-202ENST00000339350 HOXA10P31260 410 aaPredicted RBP13.53□□□□□ -0.24
DFFB-202ENST00000339350 HNRNPH3P31942 346 aaKnown RBP13.53□□□□□ -0.24
DFFB-202ENST00000339350 GBP1P32455 592 aa13.53□□□□□ -0.24
DFFB-202ENST00000339350 PSMC1P62191 440 aaKnown RBP13.53□□□□□ -0.24
DFFB-202ENST00000339350 PHEXP78562 749 aa13.53□□□□□ -0.24
DFFB-202ENST00000339350 ZC2HC1CQ53FD0 456 aaPredicted RBP13.53□□□□□ -0.24
DFFB-202ENST00000339350 FAAH2Q6GMR7 532 aa13.53□□□□□ -0.24
DFFB-202ENST00000339350 PTPRN2Q92932 1015 aa13.53□□□□□ -0.24
DFFB-202ENST00000339350 AP1M1Q9BXS5 423 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms