RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 EYA4O95677 639 aa20.36■□□□□ 0.85
PSPC1-201ENST00000338910 ALAS1P13196 640 aa20.36■□□□□ 0.85
PSPC1-201ENST00000338910 VCAM1P19320 739 aa20.36■□□□□ 0.85
PSPC1-201ENST00000338910 ADAM9Q13443 819 aa20.36■□□□□ 0.85
PSPC1-201ENST00000338910 AGBL2Q5U5Z8 902 aa20.36■□□□□ 0.85
PSPC1-201ENST00000338910 FOXR2Q6PJQ5 311 aa20.36■□□□□ 0.85
PSPC1-201ENST00000338910 EP400NLQ6ZTU2 488 aa20.36■□□□□ 0.85
PSPC1-201ENST00000338910 TAX1BP1Q86VP1 789 aa20.36■□□□□ 0.85
PSPC1-201ENST00000338910 APOBEC3FQ8IUX4 373 aaKnown RBP20.36■□□□□ 0.85
PSPC1-201ENST00000338910 RAPGEF5Q92565 580 aa20.36■□□□□ 0.85
PSPC1-201ENST00000338910 P3H4Q92791 437 aa20.36■□□□□ 0.85
PSPC1-201ENST00000338910 NUCKS1Q9H1E3 243 aaKnown RBP20.36■□□□□ 0.85
PSPC1-201ENST00000338910 RAVER2Q9HCJ3 691 aaKnown RBP20.36■□□□□ 0.85
PSPC1-201ENST00000338910 GINM1Q9NU53 330 aa20.36■□□□□ 0.85
PSPC1-201ENST00000338910 COL20A1Q9P218 1284 aa20.36■□□□□ 0.85
PSPC1-201ENST00000338910 FLOT1O75955 427 aa20.35■□□□□ 0.85
PSPC1-201ENST00000338910 NOL4O94818 638 aa20.35■□□□□ 0.85
PSPC1-201ENST00000338910 PPARDQ03181 441 aa20.35■□□□□ 0.85
PSPC1-201ENST00000338910 SLC18A3Q16572 532 aa20.35■□□□□ 0.85
PSPC1-201ENST00000338910 SFMBT2Q5VUG0 894 aa20.35■□□□□ 0.85
PSPC1-201ENST00000338910 PKD2L1Q9P0L9 805 aa20.35■□□□□ 0.85
PSPC1-201ENST00000338910 CCDC189A1A4V9 331 aa20.35■□□□□ 0.85
PSPC1-201ENST00000338910 EZRP15311 586 aaKnown RBP20.35■□□□□ 0.85
PSPC1-201ENST00000338910 IFFO1Q0D2I5 559 aa20.35■□□□□ 0.85
PSPC1-201ENST00000338910 PPP2R5CQ13362 524 aa20.35■□□□□ 0.85
PSPC1-201ENST00000338910 SCFD2Q8WU76 684 aa20.35■□□□□ 0.85
PSPC1-201ENST00000338910 CCT6BQ92526 530 aa20.35■□□□□ 0.85
PSPC1-201ENST00000338910 SCLT1Q96NL6 688 aa20.35■□□□□ 0.85
PSPC1-201ENST00000338910 NEUROG2Q9H2A3 272 aa20.35■□□□□ 0.85
PSPC1-201ENST00000338910 DDX39AO00148 427 aaKnown RBP20.34■□□□□ 0.85
PSPC1-201ENST00000338910 MGRN1O60291 552 aa20.34■□□□□ 0.85
PSPC1-201ENST00000338910 RINT1Q6NUQ1 792 aa20.34■□□□□ 0.85
PSPC1-201ENST00000338910 TLDC1Q6P9B6 456 aa20.34■□□□□ 0.85
PSPC1-201ENST00000338910 SCYL3Q8IZE3 742 aa20.34■□□□□ 0.85
PSPC1-201ENST00000338910 CLEC4DQ8WXI8 215 aa20.34■□□□□ 0.85
PSPC1-201ENST00000338910 FAM212AQ96EL1 285 aa20.34■□□□□ 0.85
PSPC1-201ENST00000338910 CEP63Q96MT8 703 aa20.34■□□□□ 0.85
PSPC1-201ENST00000338910 ZNF112Q9UJU3 913 aa20.34■□□□□ 0.85
PSPC1-201ENST00000338910 IPO5O00410 1097 aaKnown RBP20.34■□□□□ 0.85
PSPC1-201ENST00000338910 BACH1O14867 736 aa20.34■□□□□ 0.85
PSPC1-201ENST00000338910 ITGB5P18084 799 aa20.34■□□□□ 0.85
PSPC1-201ENST00000338910 IBSPP21815 317 aaPredicted RBP20.34■□□□□ 0.85
PSPC1-201ENST00000338910 SLC8A1P32418 973 aa20.34■□□□□ 0.85
PSPC1-201ENST00000338910 HSD17B4P51659 736 aa20.34■□□□□ 0.85
PSPC1-201ENST00000338910 KIAA0753Q2KHM9 967 aa20.34■□□□□ 0.85
PSPC1-201ENST00000338910 DDX42Q86XP3 938 aaKnown RBP eCLIP20.34■□□□□ 0.85
PSPC1-201ENST00000338910 UNC45AQ9H3U1 944 aa20.34■□□□□ 0.85
PSPC1-201ENST00000338910 ATP6V0A4Q9HBG4 840 aa20.34■□□□□ 0.85
PSPC1-201ENST00000338910 TUFT1Q9NNX1 390 aa20.34■□□□□ 0.85
PSPC1-201ENST00000338910 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.34■□□□□ 0.85
PSPC1-201ENST00000338910 A0A087X0T9 212 aa20.33■□□□□ 0.85
PSPC1-201ENST00000338910 TBCAO75347 108 aaKnown RBP20.33■□□□□ 0.85
PSPC1-201ENST00000338910 DNAJC8O75937 253 aaPredicted RBP20.33■□□□□ 0.85
PSPC1-201ENST00000338910 FAM228BP0C875 321 aa20.33■□□□□ 0.85
PSPC1-201ENST00000338910 PTPRAP18433 802 aa20.33■□□□□ 0.85
PSPC1-201ENST00000338910 HOXD13P35453 343 aa20.33■□□□□ 0.85
PSPC1-201ENST00000338910 CRYMQ14894 314 aa20.33■□□□□ 0.85
PSPC1-201ENST00000338910 GKAP1Q5VSY0 366 aaPredicted RBP20.33■□□□□ 0.85
PSPC1-201ENST00000338910 MXRA8Q9BRK3 442 aa20.33■□□□□ 0.85
PSPC1-201ENST00000338910 PACSIN1Q9BY11 444 aa20.33■□□□□ 0.85
PSPC1-201ENST00000338910 RPAP3Q9H6T3 665 aaPredicted RBP20.33■□□□□ 0.85
PSPC1-201ENST00000338910 SLC38A10Q9HBR0 1119 aa20.33■□□□□ 0.85
PSPC1-201ENST00000338910 DDNO94850 711 aaPredicted RBP20.33■□□□□ 0.84
PSPC1-201ENST00000338910 MYCNP04198 464 aaPredicted RBP20.33■□□□□ 0.84
PSPC1-201ENST00000338910 GHRP10912 638 aa20.33■□□□□ 0.84
PSPC1-201ENST00000338910 KNOP1Q1ED39 458 aaKnown RBP20.33■□□□□ 0.84
PSPC1-201ENST00000338910 ODF2Q5BJF6 829 aa20.33■□□□□ 0.84
PSPC1-201ENST00000338910 HOMEZQ8IX15 550 aa20.33■□□□□ 0.84
PSPC1-201ENST00000338910 IL31RAQ8NI17 732 aa20.33■□□□□ 0.84
PSPC1-201ENST00000338910 TAF4BQ92750 862 aa20.33■□□□□ 0.84
PSPC1-201ENST00000338910 KDM4CQ9H3R0 1056 aa20.33■□□□□ 0.84
PSPC1-201ENST00000338910 PICK1Q9NRD5 415 aa20.33■□□□□ 0.84
PSPC1-201ENST00000338910 WRAP73Q9P2S5 460 aaPredicted RBP20.33■□□□□ 0.84
PSPC1-201ENST00000338910 FBXL5Q9UKA1 691 aa20.33■□□□□ 0.84
PSPC1-201ENST00000338910 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.33■□□□□ 0.84
PSPC1-201ENST00000338910 KCNK3O14649 394 aa20.32■□□□□ 0.84
PSPC1-201ENST00000338910 NR2F2P24468 414 aa20.32■□□□□ 0.84
PSPC1-201ENST00000338910 BACE1P56817 501 aa20.32■□□□□ 0.84
PSPC1-201ENST00000338910 PRKG1Q13976 671 aa20.32■□□□□ 0.84
PSPC1-201ENST00000338910 HVCN1Q96D96 273 aa20.32■□□□□ 0.84
PSPC1-201ENST00000338910 FAXDC2Q96IV6 333 aa20.32■□□□□ 0.84
PSPC1-201ENST00000338910 WDR11Q9BZH6 1224 aa20.32■□□□□ 0.84
PSPC1-201ENST00000338910 NOVA2Q9UNW9 492 aaKnown RBP20.32■□□□□ 0.84
PSPC1-201ENST00000338910 ZHX2Q9Y6X8 837 aa20.32■□□□□ 0.84
PSPC1-201ENST00000338910 DCDC2CA8MYV0 355 aa20.32■□□□□ 0.84
PSPC1-201ENST00000338910 CETN3O15182 167 aa20.32■□□□□ 0.84
PSPC1-201ENST00000338910 GCNT3O95395 438 aa20.32■□□□□ 0.84
PSPC1-201ENST00000338910 GNA14O95837 355 aa20.32■□□□□ 0.84
PSPC1-201ENST00000338910 DRD4P21917 467 aa20.32■□□□□ 0.84
PSPC1-201ENST00000338910 KCNA1Q09470 495 aa20.32■□□□□ 0.84
PSPC1-201ENST00000338910 MTMR3Q13615 1198 aa20.32■□□□□ 0.84
PSPC1-201ENST00000338910 E2F5Q15329 346 aa20.32■□□□□ 0.84
PSPC1-201ENST00000338910 RPS6KA1Q15418 735 aa20.32■□□□□ 0.84
PSPC1-201ENST00000338910 ACTRT1Q8TDG2 376 aa20.32■□□□□ 0.84
PSPC1-201ENST00000338910 CALR3Q96L12 384 aaKnown RBP20.32■□□□□ 0.84
PSPC1-201ENST00000338910 PPP1R9AQ9ULJ8 1098 aa20.32■□□□□ 0.84
PSPC1-201ENST00000338910 POLR2AP24928 1970 aaKnown RBP20.31■□□□□ 0.84
PSPC1-201ENST00000338910 KIF4AO95239 1232 aa20.31■□□□□ 0.84
PSPC1-201ENST00000338910 FLT3P36888 993 aa20.31■□□□□ 0.84
PSPC1-201ENST00000338910 EDRF1Q3B7T1 1238 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms