RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 ATP2B2Q01814 1243 aa11.76□□□□□ -0.53
RTN3-201ENST00000338850 C2orf54Q08AI8 447 aa11.76□□□□□ -0.53
RTN3-201ENST00000338850 MYBPC2Q14324 1141 aa11.76□□□□□ -0.53
RTN3-201ENST00000338850 ASIC2Q16515 512 aa11.76□□□□□ -0.53
RTN3-201ENST00000338850 CDC37Q16543 378 aaPredicted RBP11.76□□□□□ -0.53
RTN3-201ENST00000338850 ECM1Q16610 540 aa11.76□□□□□ -0.53
RTN3-201ENST00000338850 QRICH1Q2TAL8 776 aa11.76□□□□□ -0.53
RTN3-201ENST00000338850 HPS3Q969F9 1004 aa11.76□□□□□ -0.53
RTN3-201ENST00000338850 CAPZA3Q96KX2 299 aa11.76□□□□□ -0.53
RTN3-201ENST00000338850 LSM14BQ9BX40 385 aaKnown RBP11.76□□□□□ -0.53
RTN3-201ENST00000338850 AMNQ9BXJ7 453 aa11.76□□□□□ -0.53
RTN3-201ENST00000338850 MLXIPQ9HAP2 919 aa11.76□□□□□ -0.53
RTN3-201ENST00000338850 GPCPD1Q9NPB8 672 aa11.76□□□□□ -0.53
RTN3-201ENST00000338850 KCND2Q9NZV8 630 aa11.76□□□□□ -0.53
RTN3-201ENST00000338850 SEL1LQ9UBV2 794 aa11.76□□□□□ -0.53
RTN3-201ENST00000338850 DUSP10Q9Y6W6 482 aa11.76□□□□□ -0.53
RTN3-201ENST00000338850 MYH11P35749 1972 aa11.76□□□□□ -0.53
RTN3-201ENST00000338850 ZNF236Q9UL36 1845 aa11.75□□□□□ -0.53
RTN3-201ENST00000338850 CCDC188H7C350 402 aa11.75□□□□□ -0.53
RTN3-201ENST00000338850 MEIS2O14770 477 aa11.75□□□□□ -0.53
RTN3-201ENST00000338850 NKRFO15226 690 aaKnown RBP eCLIP11.75□□□□□ -0.53
RTN3-201ENST00000338850 ZNF185O15231 689 aa11.75□□□□□ -0.53
RTN3-201ENST00000338850 STRNO43815 780 aa11.75□□□□□ -0.53
RTN3-201ENST00000338850 AFPP02771 609 aaKnown RBP11.75□□□□□ -0.53
RTN3-201ENST00000338850 TNNC1P63316 161 aa11.75□□□□□ -0.53
RTN3-201ENST00000338850 ARHGAP4P98171 946 aa11.75□□□□□ -0.53
RTN3-201ENST00000338850 CLUL1Q15846 466 aa11.75□□□□□ -0.53
RTN3-201ENST00000338850 PPP2R5EQ16537 467 aa11.75□□□□□ -0.53
RTN3-201ENST00000338850 UBE2SQ16763 222 aa11.75□□□□□ -0.53
RTN3-201ENST00000338850 KNOP1Q1ED39 458 aaKnown RBP11.75□□□□□ -0.53
RTN3-201ENST00000338850 TDRD12Q587J7 1177 aaKnown RBP11.75□□□□□ -0.53
RTN3-201ENST00000338850 SPDYCQ5MJ68 293 aa11.75□□□□□ -0.53
RTN3-201ENST00000338850 DPP9Q86TI2 863 aa11.75□□□□□ -0.53
RTN3-201ENST00000338850 SPATS2Q86XZ4 545 aaKnown RBP11.75□□□□□ -0.53
RTN3-201ENST00000338850 TRPV1Q8NER1 839 aa11.75□□□□□ -0.53
RTN3-201ENST00000338850 ACTRT1Q8TDG2 376 aa11.75□□□□□ -0.53
RTN3-201ENST00000338850 LENG9Q96B70 501 aa11.75□□□□□ -0.53
RTN3-201ENST00000338850 GDF15Q99988 308 aa11.75□□□□□ -0.53
RTN3-201ENST00000338850 MROH8Q9H579 483 aa11.75□□□□□ -0.53
RTN3-201ENST00000338850 TUFT1Q9NNX1 390 aa11.75□□□□□ -0.53
RTN3-201ENST00000338850 DDX20Q9UHI6 824 aaKnown RBP11.75□□□□□ -0.53
RTN3-201ENST00000338850 ZMYND8Q9ULU4 1186 aaPredicted RBP11.75□□□□□ -0.53
RTN3-201ENST00000338850 KIAA1024Q9UPX6 916 aa11.75□□□□□ -0.53
RTN3-201ENST00000338850 MTMR7Q9Y216 660 aa11.75□□□□□ -0.53
RTN3-201ENST00000338850 DIS3Q9Y2L1 958 aaKnown RBP11.75□□□□□ -0.53
RTN3-201ENST00000338850 GOLGA6CA6NDK9 693 aa11.74□□□□□ -0.53
RTN3-201ENST00000338850 MARCH6O60337 910 aa11.74□□□□□ -0.53
RTN3-201ENST00000338850 EYA4O95677 639 aa11.74□□□□□ -0.53
RTN3-201ENST00000338850 GOLGA6DP0CG33 693 aa11.74□□□□□ -0.53
RTN3-201ENST00000338850 MYBL2P10244 700 aa11.74□□□□□ -0.53
RTN3-201ENST00000338850 CYBAP13498 195 aa11.74□□□□□ -0.53
RTN3-201ENST00000338850 GGCXP38435 758 aa11.74□□□□□ -0.53
RTN3-201ENST00000338850 JAM2P57087 298 aa11.74□□□□□ -0.53
RTN3-201ENST00000338850 GFPT1Q06210 699 aaPredicted RBP11.74□□□□□ -0.53
RTN3-201ENST00000338850 KLHL30Q0D2K2 578 aa11.74□□□□□ -0.53
RTN3-201ENST00000338850 ADAM9Q13443 819 aa11.74□□□□□ -0.53
RTN3-201ENST00000338850 CUL1Q13616 776 aa11.74□□□□□ -0.53
RTN3-201ENST00000338850 GIT2Q14161 759 aa11.74□□□□□ -0.53
RTN3-201ENST00000338850 PLS1Q14651 629 aa11.74□□□□□ -0.53
RTN3-201ENST00000338850 TMEM132BQ14DG7 1078 aa11.74□□□□□ -0.53
RTN3-201ENST00000338850 HERC4Q5GLZ8 1057 aaPredicted RBP11.74□□□□□ -0.53
RTN3-201ENST00000338850 OLFML2BQ68BL8 750 aa11.74□□□□□ -0.53
RTN3-201ENST00000338850 NFRKBQ6P4R8 1299 aa11.74□□□□□ -0.53
RTN3-201ENST00000338850 LRIG3Q6UXM1 1119 aa11.74□□□□□ -0.53
RTN3-201ENST00000338850 LRRC31Q6UY01 552 aa11.74□□□□□ -0.53
RTN3-201ENST00000338850 SLFN11Q7Z7L1 901 aa11.74□□□□□ -0.53
RTN3-201ENST00000338850 VPS36Q86VN1 386 aa11.74□□□□□ -0.53
RTN3-201ENST00000338850 SYCE1Q8N0S2 351 aa11.74□□□□□ -0.53
RTN3-201ENST00000338850 ABRAQ8N0Z2 381 aa11.74□□□□□ -0.53
RTN3-201ENST00000338850 LRRC1Q9BTT6 524 aa11.74□□□□□ -0.53
RTN3-201ENST00000338850 FBXO28Q9NVF7 368 aa11.74□□□□□ -0.53
RTN3-201ENST00000338850 GOLGA6AQ9NYA3 693 aa11.74□□□□□ -0.53
RTN3-201ENST00000338850 ARMCX3Q9UH62 379 aaPredicted RBP11.74□□□□□ -0.53
RTN3-201ENST00000338850 DMGDHQ9UI17 866 aaKnown RBP11.74□□□□□ -0.53
RTN3-201ENST00000338850 SALL4Q9UJQ4 1053 aa11.74□□□□□ -0.53
RTN3-201ENST00000338850 TTC7AQ9ULT0 858 aaPredicted RBP11.74□□□□□ -0.53
RTN3-201ENST00000338850 ADAMTS5Q9UNA0 930 aa11.74□□□□□ -0.53
RTN3-201ENST00000338850 TFR2Q9UP52 801 aa11.74□□□□□ -0.53
RTN3-201ENST00000338850 DNM3Q9UQ16 869 aa11.74□□□□□ -0.53
RTN3-201ENST00000338850 PCDHA1Q9Y5I3 950 aa11.74□□□□□ -0.53
RTN3-201ENST00000338850 NCANO14594 1321 aa11.74□□□□□ -0.53
RTN3-201ENST00000338850 ZNF536O15090 1300 aa11.74□□□□□ -0.53
RTN3-201ENST00000338850 POTEB3A0JP26 581 aa11.73□□□□□ -0.53
RTN3-201ENST00000338850 E9PMD0 336 aa11.73□□□□□ -0.53
RTN3-201ENST00000338850 MSCO60682 206 aa11.73□□□□□ -0.53
RTN3-201ENST00000338850 PLA2G6O60733 806 aa11.73□□□□□ -0.53
RTN3-201ENST00000338850 HSF2BPO75031 334 aa11.73□□□□□ -0.53
RTN3-201ENST00000338850 MED24O75448 989 aa11.73□□□□□ -0.53
RTN3-201ENST00000338850 CPP00450 1065 aa11.73□□□□□ -0.53
RTN3-201ENST00000338850 FERP16591 822 aa11.73□□□□□ -0.53
RTN3-201ENST00000338850 SYN1P17600 705 aa11.73□□□□□ -0.53
RTN3-201ENST00000338850 NR2F2P24468 414 aa11.73□□□□□ -0.53
RTN3-201ENST00000338850 KLRC1P26715 233 aa11.73□□□□□ -0.53
RTN3-201ENST00000338850 CNGA1P29973 690 aa11.73□□□□□ -0.53
RTN3-201ENST00000338850 BMP8BP34820 402 aa11.73□□□□□ -0.53
RTN3-201ENST00000338850 MCCD1P59942 119 aaPredicted RBP11.73□□□□□ -0.53
RTN3-201ENST00000338850 POLR2FP61218 127 aaKnown RBP11.73□□□□□ -0.53
RTN3-201ENST00000338850 IRX5P78411 483 aaPredicted RBP11.73□□□□□ -0.53
RTN3-201ENST00000338850 KCNH2Q12809 1159 aa11.73□□□□□ -0.53
RTN3-201ENST00000338850 FRMPD4Q14CM0 1322 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms