RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 ARHGEF6Q15052 776 aa16.17■□□□□ 0.18
CDK5RAP3-201ENST00000338399 MAN2A1Q16706 1144 aa16.17■□□□□ 0.18
CDK5RAP3-201ENST00000338399 GNASQ5JWF2 1037 aa16.17■□□□□ 0.18
CDK5RAP3-201ENST00000338399 MIIPQ5JXC2 388 aa16.17■□□□□ 0.18
CDK5RAP3-201ENST00000338399 MTHFD1LQ6UB35 978 aa16.17■□□□□ 0.18
CDK5RAP3-201ENST00000338399 RHPN2Q8IUC4 686 aa16.17■□□□□ 0.18
CDK5RAP3-201ENST00000338399 SETD4Q9NVD3 440 aa16.17■□□□□ 0.18
CDK5RAP3-201ENST00000338399 DMAC2Q9NW81 257 aa16.17■□□□□ 0.18
CDK5RAP3-201ENST00000338399 ANKRD63C9JTQ0 380 aa16.16■□□□□ 0.18
CDK5RAP3-201ENST00000338399 SMIM10L2AP0DMW4 78 aa16.16■□□□□ 0.18
CDK5RAP3-201ENST00000338399 SMIM10L2BP0DMW5 78 aa16.16■□□□□ 0.18
CDK5RAP3-201ENST00000338399 HSPA6P17066 643 aa16.16■□□□□ 0.18
CDK5RAP3-201ENST00000338399 ABCD1P33897 745 aa16.16■□□□□ 0.18
CDK5RAP3-201ENST00000338399 MARSP56192 900 aaKnown RBP16.16■□□□□ 0.18
CDK5RAP3-201ENST00000338399 MAP2K1Q02750 393 aaPredicted RBP16.16■□□□□ 0.18
CDK5RAP3-201ENST00000338399 MARCH8Q5T0T0 291 aa16.16■□□□□ 0.18
CDK5RAP3-201ENST00000338399 PXYLP1Q8TE99 480 aa16.16■□□□□ 0.18
CDK5RAP3-201ENST00000338399 BEGAINQ9BUH8 593 aa16.16■□□□□ 0.18
CDK5RAP3-201ENST00000338399 UPF3AQ9H1J1 476 aaKnown RBP16.16■□□□□ 0.18
CDK5RAP3-201ENST00000338399 PCIF1Q9H4Z3 704 aa16.16■□□□□ 0.18
CDK5RAP3-201ENST00000338399 SPC25Q9HBM1 224 aa16.16■□□□□ 0.18
CDK5RAP3-201ENST00000338399 CGNQ9P2M7 1197 aaKnown RBP16.16■□□□□ 0.18
CDK5RAP3-201ENST00000338399 IMPACTQ9P2X3 320 aa16.16■□□□□ 0.18
CDK5RAP3-201ENST00000338399 K7ERI5 159 aa16.16■□□□□ 0.18
CDK5RAP3-201ENST00000338399 EPB41P11171 864 aaKnown RBP16.16■□□□□ 0.18
CDK5RAP3-201ENST00000338399 PBX1P40424 430 aa16.16■□□□□ 0.18
CDK5RAP3-201ENST00000338399 PURAQ00577 322 aaKnown RBP16.16■□□□□ 0.18
CDK5RAP3-201ENST00000338399 STRN3Q13033 797 aa16.16■□□□□ 0.18
CDK5RAP3-201ENST00000338399 VWA3BQ502W6 1294 aa16.16■□□□□ 0.18
CDK5RAP3-201ENST00000338399 MAP3K21Q5TCX8 1036 aa16.16■□□□□ 0.18
CDK5RAP3-201ENST00000338399 SPECC1LQ69YQ0 1117 aa16.16■□□□□ 0.18
CDK5RAP3-201ENST00000338399 FRMD5Q7Z6J6 570 aa16.16■□□□□ 0.18
CDK5RAP3-201ENST00000338399 LINC01465Q8N7H1 131 aa16.16■□□□□ 0.18
CDK5RAP3-201ENST00000338399 RNF149Q8NC42 400 aa16.16■□□□□ 0.18
CDK5RAP3-201ENST00000338399 LMBR1Q8WVP7 490 aa16.16■□□□□ 0.18
CDK5RAP3-201ENST00000338399 ZNF668Q96K58 619 aaPredicted RBP16.16■□□□□ 0.18
CDK5RAP3-201ENST00000338399 CBWD1Q9BRT8 395 aa16.16■□□□□ 0.18
CDK5RAP3-201ENST00000338399 TRIP12Q14669 1992 aaPredicted RBP16.15■□□□□ 0.18
CDK5RAP3-201ENST00000338399 RRN3P2A6NIE6 340 aa16.15■□□□□ 0.18
CDK5RAP3-201ENST00000338399 HAS3O00219 553 aa16.15■□□□□ 0.18
CDK5RAP3-201ENST00000338399 SLC16A3O15427 465 aaKnown RBP16.15■□□□□ 0.18
CDK5RAP3-201ENST00000338399 TMOD1P28289 359 aa16.15■□□□□ 0.18
CDK5RAP3-201ENST00000338399 PSMC2P35998 433 aaKnown RBP16.15■□□□□ 0.18
CDK5RAP3-201ENST00000338399 SNRPFP62306 86 aaKnown RBP16.15■□□□□ 0.18
CDK5RAP3-201ENST00000338399 ARMCX5Q6P1M9 558 aa16.15■□□□□ 0.18
CDK5RAP3-201ENST00000338399 SLC9A9Q8IVB4 645 aa16.15■□□□□ 0.18
CDK5RAP3-201ENST00000338399 TRIM59Q8IWR1 403 aa16.15■□□□□ 0.18
CDK5RAP3-201ENST00000338399 C12orf56Q8IXR9 622 aa16.15■□□□□ 0.18
CDK5RAP3-201ENST00000338399 KCNN1Q92952 543 aa16.15■□□□□ 0.18
CDK5RAP3-201ENST00000338399 BICD1Q96G01 975 aa16.15■□□□□ 0.18
CDK5RAP3-201ENST00000338399 NLRP4Q96MN2 994 aa16.15■□□□□ 0.18
CDK5RAP3-201ENST00000338399 KATNAL1Q9BW62 490 aa16.15■□□□□ 0.18
CDK5RAP3-201ENST00000338399 NDST4Q9H3R1 872 aa16.15■□□□□ 0.18
CDK5RAP3-201ENST00000338399 TMEM134Q9H6X4 195 aa16.15■□□□□ 0.18
CDK5RAP3-201ENST00000338399 XPNPEP3Q9NQH7 507 aa16.15■□□□□ 0.18
CDK5RAP3-201ENST00000338399 ARMCX3Q9UH62 379 aaPredicted RBP16.15■□□□□ 0.18
CDK5RAP3-201ENST00000338399 USP20Q9Y2K6 914 aa16.15■□□□□ 0.18
CDK5RAP3-201ENST00000338399 HNRNPDLO14979 420 aaKnown RBP16.14■□□□□ 0.17
CDK5RAP3-201ENST00000338399 ASAP2O43150 1006 aa16.14■□□□□ 0.17
CDK5RAP3-201ENST00000338399 EXOC3O60645 756 aa16.14■□□□□ 0.17
CDK5RAP3-201ENST00000338399 SCP2P22307 547 aa16.14■□□□□ 0.17
CDK5RAP3-201ENST00000338399 TFDP1Q14186 410 aa16.14■□□□□ 0.17
CDK5RAP3-201ENST00000338399 MYBPC2Q14324 1141 aa16.14■□□□□ 0.17
CDK5RAP3-201ENST00000338399 SLC39A4Q6P5W5 647 aa16.14■□□□□ 0.17
CDK5RAP3-201ENST00000338399 FAM186BQ8IYM0 893 aa16.14■□□□□ 0.17
CDK5RAP3-201ENST00000338399 ZNF830Q96NB3 372 aaPredicted RBP16.14■□□□□ 0.17
CDK5RAP3-201ENST00000338399 AKT3Q9Y243 479 aa16.14■□□□□ 0.17
CDK5RAP3-201ENST00000338399 FRMD4BQ9Y2L6 1034 aa16.14■□□□□ 0.17
CDK5RAP3-201ENST00000338399 TRIM17Q9Y577 477 aa16.14■□□□□ 0.17
CDK5RAP3-201ENST00000338399 NRCAMQ92823 1304 aa16.14■□□□□ 0.17
CDK5RAP3-201ENST00000338399 KPNA6O60684 536 aa16.14■□□□□ 0.17
CDK5RAP3-201ENST00000338399 ADAMTS4O75173 837 aa16.14■□□□□ 0.17
CDK5RAP3-201ENST00000338399 MYCNP04198 464 aaPredicted RBP16.14■□□□□ 0.17
CDK5RAP3-201ENST00000338399 ADSSP30520 456 aa16.14■□□□□ 0.17
CDK5RAP3-201ENST00000338399 PRMT2P55345 433 aa16.14■□□□□ 0.17
CDK5RAP3-201ENST00000338399 ARID5BQ14865 1188 aa16.14■□□□□ 0.17
CDK5RAP3-201ENST00000338399 HS1BP3Q53T59 392 aa16.14■□□□□ 0.17
CDK5RAP3-201ENST00000338399 CDCA2Q69YH5 1023 aaPredicted RBP16.14■□□□□ 0.17
CDK5RAP3-201ENST00000338399 NFRKBQ6P4R8 1299 aa16.14■□□□□ 0.17
CDK5RAP3-201ENST00000338399 RDH13Q8NBN7 331 aa16.14■□□□□ 0.17
CDK5RAP3-201ENST00000338399 ZSWIM2Q8NEG5 633 aa16.14■□□□□ 0.17
CDK5RAP3-201ENST00000338399 METTL14Q9HCE5 456 aaKnown RBP16.14■□□□□ 0.17
CDK5RAP3-201ENST00000338399 HSPBP1Q9NZL4 362 aa16.14■□□□□ 0.17
CDK5RAP3-201ENST00000338399 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.14■□□□□ 0.17
CDK5RAP3-201ENST00000338399 PHLPP2Q6ZVD8 1323 aa16.14■□□□□ 0.17
CDK5RAP3-201ENST00000338399 VTNP04004 478 aa16.13■□□□□ 0.17
CDK5RAP3-201ENST00000338399 INHAP05111 366 aa16.13■□□□□ 0.17
CDK5RAP3-201ENST00000338399 LIG4P49917 911 aa16.13■□□□□ 0.17
CDK5RAP3-201ENST00000338399 EFNA5P52803 228 aa16.13■□□□□ 0.17
CDK5RAP3-201ENST00000338399 NKX3-2P78367 333 aa16.13■□□□□ 0.17
CDK5RAP3-201ENST00000338399 TBX2Q13207 712 aaPredicted RBP16.13■□□□□ 0.17
CDK5RAP3-201ENST00000338399 HIC1Q14526 733 aa16.13■□□□□ 0.17
CDK5RAP3-201ENST00000338399 FKBP15Q5T1M5 1219 aa16.13■□□□□ 0.17
CDK5RAP3-201ENST00000338399 CXCL17Q6UXB2 119 aa16.13■□□□□ 0.17
CDK5RAP3-201ENST00000338399 ZBTB8OSQ8IWT0 167 aa16.13■□□□□ 0.17
CDK5RAP3-201ENST00000338399 SLAIN1Q8ND83 568 aa16.13■□□□□ 0.17
CDK5RAP3-201ENST00000338399 TMEM174Q8WUU8 243 aa16.13■□□□□ 0.17
CDK5RAP3-201ENST00000338399 PPP1R16BQ96T49 567 aa16.13■□□□□ 0.17
CDK5RAP3-201ENST00000338399 MTG1Q9BT17 334 aaPredicted RBP16.13■□□□□ 0.17
CDK5RAP3-201ENST00000338399 MKNK1Q9BUB5 465 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms