RNA–Protein interactions for RNA: ENST00000338325.1

CSMD2-202, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best) BASIC

Gene CSMD2, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-202ENST00000338325 AKAP17AQ02040 695 aaKnown RBP12.93□□□□□ -0.34
CSMD2-202ENST00000338325 RNASELQ05823 741 aaKnown RBP12.93□□□□□ -0.34
CSMD2-202ENST00000338325 PTPN14Q15678 1187 aa12.93□□□□□ -0.34
CSMD2-202ENST00000338325 LONRF3Q496Y0 759 aa12.93□□□□□ -0.34
CSMD2-202ENST00000338325 XKR3Q5GH77 459 aa12.93□□□□□ -0.34
CSMD2-202ENST00000338325 Q6ZUG5 572 aa12.93□□□□□ -0.34
CSMD2-202ENST00000338325 CCDC149Q6ZUS6 474 aa12.93□□□□□ -0.34
CSMD2-202ENST00000338325 OTOP3Q7RTS5 596 aa12.93□□□□□ -0.34
CSMD2-202ENST00000338325 MIER3Q7Z3K6 550 aa12.93□□□□□ -0.34
CSMD2-202ENST00000338325 FRMD5Q7Z6J6 570 aa12.93□□□□□ -0.34
CSMD2-202ENST00000338325 GPR149Q86SP6 731 aa12.93□□□□□ -0.34
CSMD2-202ENST00000338325 CEP89Q96ST8 783 aa12.93□□□□□ -0.34
CSMD2-202ENST00000338325 VN1R3Q9BXE9 311 aa12.93□□□□□ -0.34
CSMD2-202ENST00000338325 FAM105AQ9NUU6 356 aa12.93□□□□□ -0.34
CSMD2-202ENST00000338325 SPTBN4Q9H254 2564 aa12.92□□□□□ -0.34
CSMD2-202ENST00000338325 VPS13AQ96RL7 3174 aa12.92□□□□□ -0.34
CSMD2-202ENST00000338325 TMEM150BA6NC51 233 aa12.92□□□□□ -0.34
CSMD2-202ENST00000338325 MEIS3P2A8K0S8 358 aa12.92□□□□□ -0.34
CSMD2-202ENST00000338325 OFD1O75665 1012 aa12.92□□□□□ -0.34
CSMD2-202ENST00000338325 PSMD10O75832 226 aa12.92□□□□□ -0.34
CSMD2-202ENST00000338325 SLC11A1P49279 550 aa12.92□□□□□ -0.34
CSMD2-202ENST00000338325 FLCNQ8NFG4 579 aa12.92□□□□□ -0.34
CSMD2-202ENST00000338325 FEZF2Q8TBJ5 459 aa12.92□□□□□ -0.34
CSMD2-202ENST00000338325 BRF1Q92994 677 aa12.92□□□□□ -0.34
CSMD2-202ENST00000338325 NKD2Q969F2 451 aaPredicted RBP12.92□□□□□ -0.34
CSMD2-202ENST00000338325 GJA10Q969M2 543 aa12.92□□□□□ -0.34
CSMD2-202ENST00000338325 EMILIN2Q9BXX0 1053 aa12.92□□□□□ -0.34
CSMD2-202ENST00000338325 RNF26Q9BY78 433 aaPredicted RBP12.92□□□□□ -0.34
CSMD2-202ENST00000338325 GBP3Q9H0R5 595 aa12.92□□□□□ -0.34
CSMD2-202ENST00000338325 SUCLA2Q9P2R7 463 aaPredicted RBP12.92□□□□□ -0.34
CSMD2-202ENST00000338325 DNAJB4Q9UDY4 337 aa12.92□□□□□ -0.34
CSMD2-202ENST00000338325 STK39Q9UEW8 545 aa12.92□□□□□ -0.34
CSMD2-202ENST00000338325 DUSP12Q9UNI6 340 aa12.92□□□□□ -0.34
CSMD2-202ENST00000338325 DMDP11532 3685 aa12.92□□□□□ -0.34
CSMD2-202ENST00000338325 ARID2Q68CP9 1835 aa12.91□□□□□ -0.34
CSMD2-202ENST00000338325 ZNF623O75123 536 aa12.91□□□□□ -0.34
CSMD2-202ENST00000338325 MAFO75444 373 aaPredicted RBP12.91□□□□□ -0.34
CSMD2-202ENST00000338325 STBD1O95210 358 aa12.91□□□□□ -0.34
CSMD2-202ENST00000338325 CPA1P15085 419 aa12.91□□□□□ -0.34
CSMD2-202ENST00000338325 AOC1P19801 751 aa12.91□□□□□ -0.34
CSMD2-202ENST00000338325 CLCN4P51793 760 aa12.91□□□□□ -0.34
CSMD2-202ENST00000338325 TDGQ13569 410 aa12.91□□□□□ -0.34
CSMD2-202ENST00000338325 Q4G0T1 1027 aa12.91□□□□□ -0.34
CSMD2-202ENST00000338325 CATSPER4Q7RTX7 472 aa12.91□□□□□ -0.34
CSMD2-202ENST00000338325 RHPN2Q8IUC4 686 aa12.91□□□□□ -0.34
CSMD2-202ENST00000338325 URGCPQ8TCY9 931 aa12.91□□□□□ -0.34
CSMD2-202ENST00000338325 PGBD4Q96DM1 585 aa12.91□□□□□ -0.34
CSMD2-202ENST00000338325 KLHL5Q96PQ7 755 aa12.91□□□□□ -0.34
CSMD2-202ENST00000338325 SH2D3AQ9BRG2 576 aa12.91□□□□□ -0.34
CSMD2-202ENST00000338325 VPS54Q9P1Q0 977 aa12.91□□□□□ -0.34
CSMD2-202ENST00000338325 FAM186AA6NE01 2351 aa12.91□□□□□ -0.34
CSMD2-202ENST00000338325 TDRD15B5MCY1 1934 aaKnown RBP12.9□□□□□ -0.34
CSMD2-202ENST00000338325 PTPRZ1P23471 2315 aaPredicted RBP12.9□□□□□ -0.34
CSMD2-202ENST00000338325 B4GALT3O60512 393 aa12.9□□□□□ -0.34
CSMD2-202ENST00000338325 KLRC2P26717 231 aa12.9□□□□□ -0.34
CSMD2-202ENST00000338325 NTRK3Q16288 839 aa12.9□□□□□ -0.34
CSMD2-202ENST00000338325 B3GNT9Q6UX72 402 aa12.9□□□□□ -0.34
CSMD2-202ENST00000338325 C15orf39Q6ZRI6 1047 aa12.9□□□□□ -0.34
CSMD2-202ENST00000338325 ZNF280BQ86YH2 543 aa12.9□□□□□ -0.34
CSMD2-202ENST00000338325 CCDC105Q8IYK2 499 aa12.9□□□□□ -0.34
CSMD2-202ENST00000338325 TBCKQ8TEA7 893 aa12.9□□□□□ -0.34
CSMD2-202ENST00000338325 NLRP4Q96MN2 994 aa12.9□□□□□ -0.34
CSMD2-202ENST00000338325 RTP3Q9BQQ7 232 aa12.9□□□□□ -0.34
CSMD2-202ENST00000338325 JPH2Q9BR39 696 aaPredicted RBP12.9□□□□□ -0.34
CSMD2-202ENST00000338325 SLC26A6Q9BXS9 759 aa12.9□□□□□ -0.34
CSMD2-202ENST00000338325 C22orf23Q9BZE7 217 aa12.9□□□□□ -0.34
CSMD2-202ENST00000338325 SH3GLB2Q9NR46 395 aa12.9□□□□□ -0.34
CSMD2-202ENST00000338325 AGPAT5Q9NUQ2 364 aa12.9□□□□□ -0.34
CSMD2-202ENST00000338325 FBXL21Q9UKT6 434 aa12.9□□□□□ -0.34
CSMD2-202ENST00000338325 DDX11L8A8MPP1 907 aa12.89□□□□□ -0.35
CSMD2-202ENST00000338325 SSBP05455 408 aaKnown RBP eCLIP12.89□□□□□ -0.35
CSMD2-202ENST00000338325 CNPP09543 421 aaKnown RBP12.89□□□□□ -0.35
CSMD2-202ENST00000338325 IFNAR1P17181 557 aa12.89□□□□□ -0.35
CSMD2-202ENST00000338325 NPR3P17342 541 aa12.89□□□□□ -0.35
CSMD2-202ENST00000338325 NLRP5P59047 1200 aa12.89□□□□□ -0.35
CSMD2-202ENST00000338325 LETM2Q2VYF4 491 aa12.89□□□□□ -0.35
CSMD2-202ENST00000338325 BLOC1S2Q6QNY1 142 aa12.89□□□□□ -0.35
CSMD2-202ENST00000338325 AGMOQ6ZNB7 445 aa12.89□□□□□ -0.35
CSMD2-202ENST00000338325 KSR1Q8IVT5 923 aa12.89□□□□□ -0.35
CSMD2-202ENST00000338325 ADSSL1Q8N142 457 aa12.89□□□□□ -0.35
CSMD2-202ENST00000338325 JAKMIP1Q96N16 626 aaKnown RBP12.89□□□□□ -0.35
CSMD2-202ENST00000338325 TMEM175Q9BSA9 504 aa12.89□□□□□ -0.35
CSMD2-202ENST00000338325 KCNK12Q9HB15 430 aa12.89□□□□□ -0.35
CSMD2-202ENST00000338325 MRPL17Q9NRX2 175 aaKnown RBP12.89□□□□□ -0.35
CSMD2-202ENST00000338325 PCDHB2Q9Y5E7 798 aa12.89□□□□□ -0.35
CSMD2-202ENST00000338325 MTCL1Q9Y4B5 1905 aaKnown RBP12.89□□□□□ -0.35
CSMD2-202ENST00000338325 RIF1Q5UIP0 2472 aaKnown RBP12.89□□□□□ -0.35
CSMD2-202ENST00000338325 CNTNAP2Q9UHC6 1331 aa12.89□□□□□ -0.35
CSMD2-202ENST00000338325 CYP3A7-CYP3A51PA0A087WV96 503 aa12.88□□□□□ -0.35
CSMD2-202ENST00000338325 PI15O43692 258 aa12.88□□□□□ -0.35
CSMD2-202ENST00000338325 LILRB3O75022 631 aa12.88□□□□□ -0.35
CSMD2-202ENST00000338325 CDC45O75419 566 aa12.88□□□□□ -0.35
CSMD2-202ENST00000338325 DDHD2O94830 711 aa12.88□□□□□ -0.35
CSMD2-202ENST00000338325 TDP2O95551 362 aa12.88□□□□□ -0.35
CSMD2-202ENST00000338325 CYP3A7P24462 503 aa12.88□□□□□ -0.35
CSMD2-202ENST00000338325 ANGPT1Q15389 498 aa12.88□□□□□ -0.35
CSMD2-202ENST00000338325 SIX5Q8N196 739 aa12.88□□□□□ -0.35
CSMD2-202ENST00000338325 FBXL16Q8N461 479 aa12.88□□□□□ -0.35
CSMD2-202ENST00000338325 DTWD2Q8NBA8 298 aa12.88□□□□□ -0.35
CSMD2-202ENST00000338325 CMASQ8NFW8 434 aaPredicted RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms