RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 PDCD7Q8N8D1 485 aaKnown RBP13.05□□□□□ -0.32
FN1-202ENST00000336916 SLC7A5P2Q9GIP4 190 aa13.05□□□□□ -0.32
FN1-202ENST00000336916 FAM49AQ9H0Q0 323 aaPredicted RBP13.05□□□□□ -0.32
FN1-202ENST00000336916 SELENONQ9NZV5 590 aa13.05□□□□□ -0.32
FN1-202ENST00000336916 WDR35Q9P2L0 1181 aa13.05□□□□□ -0.32
FN1-202ENST00000336916 AFF2P51816 1311 aa13.05□□□□□ -0.32
FN1-202ENST00000336916 SMIM24O75264 130 aa13.05□□□□□ -0.32
FN1-202ENST00000336916 SDC4P31431 198 aa13.05□□□□□ -0.32
FN1-202ENST00000336916 YWHAHQ04917 246 aaPredicted RBP13.05□□□□□ -0.32
FN1-202ENST00000336916 NFX1Q12986 1120 aaKnown RBP13.05□□□□□ -0.32
FN1-202ENST00000336916 MAPRE1Q15691 268 aaKnown RBP13.05□□□□□ -0.32
FN1-202ENST00000336916 FAM133AQ8N9E0 248 aa13.05□□□□□ -0.32
FN1-202ENST00000336916 EDC3Q96F86 508 aaKnown RBP13.05□□□□□ -0.32
FN1-202ENST00000336916 STRBPQ96SI9 672 aaKnown RBP13.05□□□□□ -0.32
FN1-202ENST00000336916 CDV3Q9UKY7 258 aaKnown RBP13.05□□□□□ -0.32
FN1-202ENST00000336916 FLT1P17948 1338 aa13.05□□□□□ -0.32
FN1-202ENST00000336916 H3BRJ5 948 aa13.05□□□□□ -0.32
FN1-202ENST00000336916 GNGT1P63211 74 aa13.05□□□□□ -0.32
FN1-202ENST00000336916 PRKCQQ04759 706 aa13.05□□□□□ -0.32
FN1-202ENST00000336916 SNCBQ16143 134 aa13.05□□□□□ -0.32
FN1-202ENST00000336916 DACT3Q96B18 629 aaPredicted RBP13.05□□□□□ -0.32
FN1-202ENST00000336916 POLR3CQ9BUI4 534 aaPredicted RBP13.05□□□□□ -0.32
FN1-202ENST00000336916 TEX13BQ9BXU2 312 aa13.05□□□□□ -0.32
FN1-202ENST00000336916 ZFYVE28Q9HCC9 887 aa13.05□□□□□ -0.32
FN1-202ENST00000336916 ZNRF3Q9ULT6 936 aa13.05□□□□□ -0.32
FN1-202ENST00000336916 POLIQ9UNA4 740 aa13.05□□□□□ -0.32
FN1-202ENST00000336916 RIMBP3CA6NJZ7 1639 aa13.05□□□□□ -0.32
FN1-202ENST00000336916 RIMBP3BA6NNM3 1639 aa13.05□□□□□ -0.32
FN1-202ENST00000336916 RIMBP3Q9UFD9 1639 aa13.05□□□□□ -0.32
FN1-202ENST00000336916 GRID2IPA4D2P6 1211 aa13.05□□□□□ -0.32
FN1-202ENST00000336916 FAF2Q96CS3 445 aa13.05□□□□□ -0.32
FN1-202ENST00000336916 PPP1R13BQ96KQ4 1090 aa13.05□□□□□ -0.32
FN1-202ENST00000336916 TRAIPQ9BWF2 469 aa13.05□□□□□ -0.32
FN1-202ENST00000336916 NR3C1P04150 777 aa13.05□□□□□ -0.32
FN1-202ENST00000336916 COPS2P61201 443 aa13.05□□□□□ -0.32
FN1-202ENST00000336916 COG2Q14746 738 aa13.05□□□□□ -0.32
FN1-202ENST00000336916 GRM4Q14833 912 aa13.05□□□□□ -0.32
FN1-202ENST00000336916 LONRF3Q496Y0 759 aa13.05□□□□□ -0.32
FN1-202ENST00000336916 FAM83BQ5T0W9 1011 aa13.05□□□□□ -0.32
FN1-202ENST00000336916 FRMD5Q7Z6J6 570 aa13.05□□□□□ -0.32
FN1-202ENST00000336916 NGRNQ9NPE2 291 aaKnown RBP13.05□□□□□ -0.32
FN1-202ENST00000336916 ANAPC7Q9UJX3 599 aa13.05□□□□□ -0.32
FN1-202ENST00000336916 SLC4A7Q9Y6M7 1214 aa13.05□□□□□ -0.32
FN1-202ENST00000336916 LRRIQ3A6PVS8 624 aaPredicted RBP13.05□□□□□ -0.32
FN1-202ENST00000336916 HNRNPRO43390 633 aaKnown RBP13.05□□□□□ -0.32
FN1-202ENST00000336916 ORC4O43929 436 aa13.05□□□□□ -0.32
FN1-202ENST00000336916 APOA4P06727 396 aa13.05□□□□□ -0.32
FN1-202ENST00000336916 CLIC6Q96NY7 704 aa13.05□□□□□ -0.32
FN1-202ENST00000336916 PCDHA10Q9Y5I2 948 aa13.05□□□□□ -0.32
FN1-202ENST00000336916 H7C1W4 665 aa13.05□□□□□ -0.32
FN1-202ENST00000336916 TNPO2O14787 897 aaKnown RBP13.05□□□□□ -0.32
FN1-202ENST00000336916 HEATR6Q6AI08 1181 aaKnown RBP13.05□□□□□ -0.32
FN1-202ENST00000336916 PADI6Q6TGC4 694 aa13.05□□□□□ -0.32
FN1-202ENST00000336916 RNF168Q8IYW5 571 aaPredicted RBP13.05□□□□□ -0.32
FN1-202ENST00000336916 BHMT2Q9H2M3 363 aa13.05□□□□□ -0.32
FN1-202ENST00000336916 SORBS3O60504 671 aa13.04□□□□□ -0.32
FN1-202ENST00000336916 SLC1A1P43005 524 aa13.04□□□□□ -0.32
FN1-202ENST00000336916 VAMP7P51809 220 aa13.04□□□□□ -0.32
FN1-202ENST00000336916 GTF2H3Q13889 308 aa13.04□□□□□ -0.32
FN1-202ENST00000336916 P3H1Q32P28 736 aa13.04□□□□□ -0.32
FN1-202ENST00000336916 SDE2Q6IQ49 451 aa13.04□□□□□ -0.32
FN1-202ENST00000336916 BCAS4Q8TDM0 211 aa13.04□□□□□ -0.32
FN1-202ENST00000336916 DPH5Q9H2P9 285 aa13.04□□□□□ -0.32
FN1-202ENST00000336916 VPS9D1Q9Y2B5 631 aa13.04□□□□□ -0.32
FN1-202ENST00000336916 ZNF197O14709 1029 aa13.04□□□□□ -0.32
FN1-202ENST00000336916 DYNLL1P63167 89 aaKnown RBP13.04□□□□□ -0.32
FN1-202ENST00000336916 CUL4AQ13619 759 aa13.04□□□□□ -0.32
FN1-202ENST00000336916 FAM173BQ6P4H8 233 aa13.04□□□□□ -0.32
FN1-202ENST00000336916 C4orf22Q6V702 233 aa13.04□□□□□ -0.32
FN1-202ENST00000336916 ASIC4Q96FT7 647 aa13.04□□□□□ -0.32
FN1-202ENST00000336916 ACTR5Q9H9F9 607 aaPredicted RBP13.04□□□□□ -0.32
FN1-202ENST00000336916 RNF146Q9NTX7 359 aa13.04□□□□□ -0.32
FN1-202ENST00000336916 MYH7BA7E2Y1 1941 aa13.04□□□□□ -0.32
FN1-202ENST00000336916 RRN3P2A6NIE6 340 aa13.04□□□□□ -0.32
FN1-202ENST00000336916 SNX1Q13596 522 aa13.04□□□□□ -0.32
FN1-202ENST00000336916 KIF19Q2TAC6 998 aa13.04□□□□□ -0.32
FN1-202ENST00000336916 BRINP3Q76B58 766 aa13.04□□□□□ -0.32
FN1-202ENST00000336916 PATL1Q86TB9 770 aaKnown RBP13.04□□□□□ -0.32
FN1-202ENST00000336916 ULK4Q96C45 1275 aa13.04□□□□□ -0.32
FN1-202ENST00000336916 SEC31BQ9NQW1 1179 aa13.04□□□□□ -0.32
FN1-202ENST00000336916 SLC16A2P36021 539 aa13.04□□□□□ -0.32
FN1-202ENST00000336916 ARPP19P56211 112 aa13.04□□□□□ -0.32
FN1-202ENST00000336916 STX18Q9P2W9 335 aaKnown RBP13.04□□□□□ -0.32
FN1-202ENST00000336916 IFT172Q9UG01 1749 aa13.04□□□□□ -0.32
FN1-202ENST00000336916 KRT87PA6NCN2 255 aa13.04□□□□□ -0.32
FN1-202ENST00000336916 MTSS1O43312 755 aa13.04□□□□□ -0.32
FN1-202ENST00000336916 KCNQ3O43525 872 aa13.04□□□□□ -0.32
FN1-202ENST00000336916 PTPN12Q05209 780 aaKnown RBP13.04□□□□□ -0.32
FN1-202ENST00000336916 GRIN1Q05586 938 aa13.04□□□□□ -0.32
FN1-202ENST00000336916 MAPRE2Q15555 327 aa13.04□□□□□ -0.32
FN1-202ENST00000336916 SH3RF3Q8TEJ3 882 aaPredicted RBP13.04□□□□□ -0.32
FN1-202ENST00000336916 KRT35Q92764 455 aa13.04□□□□□ -0.32
FN1-202ENST00000336916 EPB41L5Q9HCM4 733 aa13.04□□□□□ -0.32
FN1-202ENST00000336916 TMEM63CQ9P1W3 806 aa13.04□□□□□ -0.32
FN1-202ENST00000336916 MUTP22033 750 aa13.04□□□□□ -0.32
FN1-202ENST00000336916 RHPN2Q8IUC4 686 aa13.04□□□□□ -0.32
FN1-202ENST00000336916 SCN4BQ8IWT1 228 aa13.04□□□□□ -0.32
FN1-202ENST00000336916 DPP7Q9UHL4 492 aa13.04□□□□□ -0.32
FN1-202ENST00000336916 ATP8A1Q9Y2Q0 1164 aa13.04□□□□□ -0.32
FN1-202ENST00000336916 CLIC2O15247 247 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms