RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 HEATR4Q86WZ0 1026 aa10.42□□□□□ -0.74
COL4A6-201ENST00000334504 RIN2Q8WYP3 895 aaPredicted RBP10.42□□□□□ -0.74
COL4A6-201ENST00000334504 RUBCNQ92622 972 aa10.42□□□□□ -0.74
COL4A6-201ENST00000334504 THTPAQ9BU02 230 aa10.42□□□□□ -0.74
COL4A6-201ENST00000334504 SLITRK6Q9H5Y7 841 aa10.42□□□□□ -0.74
COL4A6-201ENST00000334504 PDP2Q9P2J9 529 aa10.42□□□□□ -0.74
COL4A6-201ENST00000334504 SESN1Q9Y6P5 492 aa10.42□□□□□ -0.74
COL4A6-201ENST00000334504 SNUPNO95149 360 aaKnown RBP10.41□□□□□ -0.74
COL4A6-201ENST00000334504 ATP6V1B1P15313 513 aa10.41□□□□□ -0.74
COL4A6-201ENST00000334504 LBRQ14739 615 aaKnown RBP10.41□□□□□ -0.74
COL4A6-201ENST00000334504 FAM160B1Q5W0V3 765 aa10.41□□□□□ -0.74
COL4A6-201ENST00000334504 LRIG3Q6UXM1 1119 aa10.41□□□□□ -0.74
COL4A6-201ENST00000334504 LUZP2Q86TE4 346 aa10.41□□□□□ -0.74
COL4A6-201ENST00000334504 RNF25Q96BH1 459 aaPredicted RBP10.41□□□□□ -0.74
COL4A6-201ENST00000334504 TUBGCP3Q96CW5 907 aa10.41□□□□□ -0.74
COL4A6-201ENST00000334504 AIFM3Q96NN9 605 aa10.41□□□□□ -0.74
COL4A6-201ENST00000334504 FAM193BQ96PV7 902 aaPredicted RBP10.41□□□□□ -0.74
COL4A6-201ENST00000334504 CAPN15O75808 1086 aa10.41□□□□□ -0.74
COL4A6-201ENST00000334504 CASP1P29466 404 aa10.41□□□□□ -0.74
COL4A6-201ENST00000334504 VHLP40337 213 aa10.41□□□□□ -0.74
COL4A6-201ENST00000334504 ERP27Q96DN0 273 aa10.41□□□□□ -0.74
COL4A6-201ENST00000334504 XPO6Q96QU8 1125 aaKnown RBP10.41□□□□□ -0.74
COL4A6-201ENST00000334504 NUP85Q9BW27 656 aa10.41□□□□□ -0.74
COL4A6-201ENST00000334504 GOLGA8RI6L899 631 aa10.41□□□□□ -0.74
COL4A6-201ENST00000334504 MARK3P27448 753 aa10.41□□□□□ -0.74
COL4A6-201ENST00000334504 LSP1P33241 339 aa10.41□□□□□ -0.74
COL4A6-201ENST00000334504 GYG1P46976 350 aa10.41□□□□□ -0.74
COL4A6-201ENST00000334504 PPP6R3Q5H9R7 873 aaPredicted RBP10.41□□□□□ -0.74
COL4A6-201ENST00000334504 IZUMO3Q5VZ72 239 aa10.41□□□□□ -0.74
COL4A6-201ENST00000334504 MARCH10Q8NA82 808 aaPredicted RBP10.41□□□□□ -0.74
COL4A6-201ENST00000334504 TTC8Q8TAM2 541 aa10.41□□□□□ -0.74
COL4A6-201ENST00000334504 RUBCNLQ9H714 662 aa10.41□□□□□ -0.74
COL4A6-201ENST00000334504 SLC52A2Q9HAB3 445 aa10.41□□□□□ -0.74
COL4A6-201ENST00000334504 CCDC87Q9NVE4 849 aa10.41□□□□□ -0.74
COL4A6-201ENST00000334504 KLHL8Q9P2G9 620 aaPredicted RBP10.41□□□□□ -0.74
COL4A6-201ENST00000334504 MKL2Q9ULH7 1088 aa10.41□□□□□ -0.74
COL4A6-201ENST00000334504 KIAA0232Q92628 1395 aa10.41□□□□□ -0.74
COL4A6-201ENST00000334504 NFIBO00712 420 aa10.41□□□□□ -0.74
COL4A6-201ENST00000334504 SH2B2O14492 632 aaPredicted RBP10.41□□□□□ -0.74
COL4A6-201ENST00000334504 ORC4O43929 436 aa10.41□□□□□ -0.74
COL4A6-201ENST00000334504 FOSP01100 380 aaPredicted RBP10.41□□□□□ -0.74
COL4A6-201ENST00000334504 GRK2P25098 689 aa10.41□□□□□ -0.74
COL4A6-201ENST00000334504 SMARCA1P28370 1054 aa10.41□□□□□ -0.74
COL4A6-201ENST00000334504 CCDC142Q17RM4 750 aa10.41□□□□□ -0.74
COL4A6-201ENST00000334504 SPATA4Q8NEY3 305 aa10.41□□□□□ -0.74
COL4A6-201ENST00000334504 SIKE1Q9BRV8 207 aa10.41□□□□□ -0.74
COL4A6-201ENST00000334504 TSSK1BQ9BXA7 367 aa10.41□□□□□ -0.74
COL4A6-201ENST00000334504 PSD3Q9NYI0 1048 aa10.41□□□□□ -0.74
COL4A6-201ENST00000334504 DBR1Q9UK59 544 aaKnown RBP10.41□□□□□ -0.74
COL4A6-201ENST00000334504 HEY1Q9Y5J3 304 aa10.41□□□□□ -0.74
COL4A6-201ENST00000334504 CCT8L1PA6NM43 557 aa10.41□□□□□ -0.74
COL4A6-201ENST00000334504 EFCAB14O75071 495 aa10.41□□□□□ -0.74
COL4A6-201ENST00000334504 PRR29P0C7W0 189 aa10.41□□□□□ -0.74
COL4A6-201ENST00000334504 EIF4A1P60842 406 aaKnown RBP10.41□□□□□ -0.74
COL4A6-201ENST00000334504 SLFN13Q68D06 897 aa10.41□□□□□ -0.74
COL4A6-201ENST00000334504 APLFQ8IW19 511 aaPredicted RBP10.41□□□□□ -0.74
COL4A6-201ENST00000334504 CLEC4FQ8N1N0 589 aa10.41□□□□□ -0.74
COL4A6-201ENST00000334504 TTC13Q8NBP0 860 aa10.41□□□□□ -0.74
COL4A6-201ENST00000334504 C1orf54Q8WWF1 131 aa10.41□□□□□ -0.74
COL4A6-201ENST00000334504 OTULINQ96BN8 352 aa10.41□□□□□ -0.74
COL4A6-201ENST00000334504 SLC12A6Q9UHW9 1150 aa10.41□□□□□ -0.74
COL4A6-201ENST00000334504 ATF5Q9Y2D1 282 aaPredicted RBP10.41□□□□□ -0.74
COL4A6-201ENST00000334504 ZNF233A6NK53 670 aa10.4□□□□□ -0.74
COL4A6-201ENST00000334504 GNAT1P11488 350 aa10.4□□□□□ -0.74
COL4A6-201ENST00000334504 PPP4R3CPQ6ZMV5 832 aa10.4□□□□□ -0.74
COL4A6-201ENST00000334504 PASD1Q8IV76 773 aa10.4□□□□□ -0.74
COL4A6-201ENST00000334504 ATP11CQ8NB49 1132 aa10.4□□□□□ -0.74
COL4A6-201ENST00000334504 ZNF564Q8TBZ8 553 aaPredicted RBP10.4□□□□□ -0.74
COL4A6-201ENST00000334504 OMA1Q96E52 524 aa10.4□□□□□ -0.74
COL4A6-201ENST00000334504 GCOM2Q9BZD3 368 aaPredicted RBP10.4□□□□□ -0.74
COL4A6-201ENST00000334504 AMACRQ9UHK6 382 aa10.4□□□□□ -0.74
COL4A6-201ENST00000334504 PIK3R2O00459 728 aa10.4□□□□□ -0.74
COL4A6-201ENST00000334504 ENO3P13929 434 aaPredicted RBP10.4□□□□□ -0.74
COL4A6-201ENST00000334504 BYSLQ13895 437 aaKnown RBP10.4□□□□□ -0.74
COL4A6-201ENST00000334504 SIX6OS1Q8N1H7 587 aa10.4□□□□□ -0.74
COL4A6-201ENST00000334504 ZNF507Q8TCN5 953 aa10.4□□□□□ -0.74
COL4A6-201ENST00000334504 NACC1Q96RE7 527 aa10.4□□□□□ -0.74
COL4A6-201ENST00000334504 LRRC4Q9HBW1 653 aa10.4□□□□□ -0.74
COL4A6-201ENST00000334504 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.4□□□□□ -0.74
COL4A6-201ENST00000334504 CSADQ9Y600 493 aa10.4□□□□□ -0.74
COL4A6-201ENST00000334504 ASXL2Q76L83 1435 aa10.4□□□□□ -0.74
COL4A6-201ENST00000334504 TEX33O43247 280 aa10.4□□□□□ -0.74
COL4A6-201ENST00000334504 PPIP5K2O43314 1243 aa10.4□□□□□ -0.74
COL4A6-201ENST00000334504 PLOD1Q02809 727 aaPredicted RBP10.4□□□□□ -0.74
COL4A6-201ENST00000334504 KRT17Q04695 432 aa10.4□□□□□ -0.74
COL4A6-201ENST00000334504 LONRF1Q17RB8 773 aa10.4□□□□□ -0.74
COL4A6-201ENST00000334504 ANKMY2Q8IV38 441 aa10.4□□□□□ -0.74
COL4A6-201ENST00000334504 DCPSQ96C86 337 aaKnown RBP10.4□□□□□ -0.74
COL4A6-201ENST00000334504 MS4A14Q96JA4 679 aa10.4□□□□□ -0.74
COL4A6-201ENST00000334504 RANBP17Q9H2T7 1088 aaKnown RBP10.4□□□□□ -0.74
COL4A6-201ENST00000334504 ADAM22Q9P0K1 906 aa10.4□□□□□ -0.74
COL4A6-201ENST00000334504 KDM5BQ9UGL1 1544 aa10.4□□□□□ -0.74
COL4A6-201ENST00000334504 ZNF608Q9ULD9 1512 aaPredicted RBP10.4□□□□□ -0.74
COL4A6-201ENST00000334504 TYW5A2RUC4 315 aaKnown RBP10.4□□□□□ -0.74
COL4A6-201ENST00000334504 RSPH10B2B2RC85 870 aa10.4□□□□□ -0.74
COL4A6-201ENST00000334504 NEMP1O14524 444 aa10.4□□□□□ -0.74
COL4A6-201ENST00000334504 RSPH10BP0C881 870 aa10.4□□□□□ -0.74
COL4A6-201ENST00000334504 MTF1Q14872 753 aa10.4□□□□□ -0.74
COL4A6-201ENST00000334504 CERKLQ49MI3 558 aaPredicted RBP10.4□□□□□ -0.74
COL4A6-201ENST00000334504 RWDD4Q6NW29 188 aaKnown RBP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms