RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 CCDC40Q4G0X9 1142 aa14.22□□□□□ -0.13
CPNE1-201ENST00000317677 NCAPG2Q86XI2 1143 aa14.22□□□□□ -0.13
CPNE1-201ENST00000317677 REM2Q8IYK8 340 aaPredicted RBP14.22□□□□□ -0.13
CPNE1-201ENST00000317677 FAM133AQ8N9E0 248 aa14.22□□□□□ -0.13
CPNE1-201ENST00000317677 ZNFX1Q9P2E3 1918 aaKnown RBP14.22□□□□□ -0.13
CPNE1-201ENST00000317677 FAM155AB1AL88 458 aaPredicted RBP14.22□□□□□ -0.13
CPNE1-201ENST00000317677 CLIC2O15247 247 aa14.22□□□□□ -0.13
CPNE1-201ENST00000317677 USO1O60763 962 aaKnown RBP14.22□□□□□ -0.13
CPNE1-201ENST00000317677 SLC10A3P09131 477 aa14.22□□□□□ -0.13
CPNE1-201ENST00000317677 HSPA8P11142 646 aaKnown RBP14.22□□□□□ -0.13
CPNE1-201ENST00000317677 EDNRBP24530 442 aa14.22□□□□□ -0.13
CPNE1-201ENST00000317677 PLCB4Q15147 1175 aa14.22□□□□□ -0.13
CPNE1-201ENST00000317677 FIGNQ5HY92 759 aa14.22□□□□□ -0.13
CPNE1-201ENST00000317677 FKBP15Q5T1M5 1219 aa14.22□□□□□ -0.13
CPNE1-201ENST00000317677 ANO5Q75V66 913 aa14.22□□□□□ -0.13
CPNE1-201ENST00000317677 DNERQ8NFT8 737 aa14.22□□□□□ -0.13
CPNE1-201ENST00000317677 IWS1Q96ST2 819 aa14.22□□□□□ -0.13
CPNE1-201ENST00000317677 SEL1LQ9UBV2 794 aa14.22□□□□□ -0.13
CPNE1-201ENST00000317677 PFASO15067 1338 aa14.21□□□□□ -0.13
CPNE1-201ENST00000317677 STAM2O75886 525 aa14.21□□□□□ -0.13
CPNE1-201ENST00000317677 AKAP3O75969 853 aa14.21□□□□□ -0.13
CPNE1-201ENST00000317677 NR3C1P04150 777 aa14.21□□□□□ -0.13
CPNE1-201ENST00000317677 ICAM3P32942 547 aa14.21□□□□□ -0.13
CPNE1-201ENST00000317677 BIRC2Q13490 618 aa14.21□□□□□ -0.13
CPNE1-201ENST00000317677 MEA1Q16626 185 aa14.21□□□□□ -0.13
CPNE1-201ENST00000317677 ODR4Q5SWX8 454 aa14.21□□□□□ -0.13
CPNE1-201ENST00000317677 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.21□□□□□ -0.13
CPNE1-201ENST00000317677 TRMT1LQ7Z2T5 733 aaKnown RBP14.21□□□□□ -0.13
CPNE1-201ENST00000317677 CCDC60Q8IWA6 550 aaPredicted RBP14.21□□□□□ -0.13
CPNE1-201ENST00000317677 FAM178BQ8IXR5 827 aa14.21□□□□□ -0.13
CPNE1-201ENST00000317677 ACRBPQ8NEB7 543 aa14.21□□□□□ -0.13
CPNE1-201ENST00000317677 RDM1Q8NG50 284 aa14.21□□□□□ -0.13
CPNE1-201ENST00000317677 OR8K1Q8NGG5 319 aa14.21□□□□□ -0.13
CPNE1-201ENST00000317677 GPRC5CQ9NQ84 441 aa14.21□□□□□ -0.13
CPNE1-201ENST00000317677 GABBR1Q9UBS5 961 aa14.21□□□□□ -0.13
CPNE1-201ENST00000317677 FBXO40Q9UH90 709 aa14.21□□□□□ -0.13
CPNE1-201ENST00000317677 LUC7L2Q9Y383 392 aaKnown RBP14.21□□□□□ -0.13
CPNE1-201ENST00000317677 REXO2Q9Y3B8 237 aaKnown RBP14.21□□□□□ -0.13
CPNE1-201ENST00000317677 PCDHA10Q9Y5I2 948 aa14.21□□□□□ -0.13
CPNE1-201ENST00000317677 MCM3APO60318 1980 aa14.21□□□□□ -0.14
CPNE1-201ENST00000317677 MYH9P35579 1960 aaKnown RBP14.2□□□□□ -0.14
CPNE1-201ENST00000317677 CETN3O15182 167 aa14.2□□□□□ -0.14
CPNE1-201ENST00000317677 GNA14O95837 355 aa14.2□□□□□ -0.14
CPNE1-201ENST00000317677 ARHGAP25P42331 645 aa14.2□□□□□ -0.14
CPNE1-201ENST00000317677 SMTNP53814 917 aa14.2□□□□□ -0.14
CPNE1-201ENST00000317677 INHBEP58166 350 aa14.2□□□□□ -0.14
CPNE1-201ENST00000317677 ACTR2P61160 394 aa14.2□□□□□ -0.14
CPNE1-201ENST00000317677 APBA1Q02410 837 aa14.2□□□□□ -0.14
CPNE1-201ENST00000317677 SP4Q02446 784 aa14.2□□□□□ -0.14
CPNE1-201ENST00000317677 STXBP2Q15833 593 aa14.2□□□□□ -0.14
CPNE1-201ENST00000317677 DPY19L2P1Q6NXN4 242 aa14.2□□□□□ -0.14
CPNE1-201ENST00000317677 ABHD15Q6UXT9 468 aa14.2□□□□□ -0.14
CPNE1-201ENST00000317677 TMTC1Q8IUR5 882 aa14.2□□□□□ -0.14
CPNE1-201ENST00000317677 RETREG2Q8NC44 543 aa14.2□□□□□ -0.14
CPNE1-201ENST00000317677 FAM76AQ8TAV0 307 aa14.2□□□□□ -0.14
CPNE1-201ENST00000317677 N4BP2L2Q92802 583 aaPredicted RBP14.2□□□□□ -0.14
CPNE1-201ENST00000317677 BORCS6Q96GS4 357 aa14.2□□□□□ -0.14
CPNE1-201ENST00000317677 NUP58Q9BVL2 599 aa14.2□□□□□ -0.14
CPNE1-201ENST00000317677 TRIM6Q9C030 488 aaPredicted RBP14.2□□□□□ -0.14
CPNE1-201ENST00000317677 JPH1Q9HDC5 661 aaPredicted RBP14.2□□□□□ -0.14
CPNE1-201ENST00000317677 SLC9A2Q9UBY0 812 aa14.2□□□□□ -0.14
CPNE1-201ENST00000317677 HPCAL4Q9UM19 191 aa14.2□□□□□ -0.14
CPNE1-201ENST00000317677 A0A1W2PQJ5 194 aa14.2□□□□□ -0.14
CPNE1-201ENST00000317677 CTAGE15A4D2H0 777 aa14.2□□□□□ -0.14
CPNE1-201ENST00000317677 EIF3HO15372 352 aaKnown RBP eCLIP14.2□□□□□ -0.146e-7■■□□□ 13.6
CPNE1-201ENST00000317677 CALUO43852 315 aaPredicted RBP14.2□□□□□ -0.14
CPNE1-201ENST00000317677 NOL4O94818 638 aa14.2□□□□□ -0.14
CPNE1-201ENST00000317677 CCDC175P0C221 793 aa14.2□□□□□ -0.14
CPNE1-201ENST00000317677 CTAGE8P0CG41 777 aa14.2□□□□□ -0.14
CPNE1-201ENST00000317677 TRIM21P19474 475 aaKnown RBP14.2□□□□□ -0.14
CPNE1-201ENST00000317677 ZBED6P86452 979 aa14.2□□□□□ -0.14
CPNE1-201ENST00000317677 CTAGE6Q86UF2 777 aa14.2□□□□□ -0.14
CPNE1-201ENST00000317677 RASAL3Q86YV0 1011 aa14.2□□□□□ -0.14
CPNE1-201ENST00000317677 CTAGE4Q8IX94 777 aa14.2□□□□□ -0.14
CPNE1-201ENST00000317677 BAP1Q92560 729 aa14.2□□□□□ -0.14
CPNE1-201ENST00000317677 FAM207AQ9NSI2 230 aaPredicted RBP14.2□□□□□ -0.14
CPNE1-201ENST00000317677 ANKEF1Q9NU02 776 aa14.2□□□□□ -0.14
CPNE1-201ENST00000317677 GGA2Q9UJY4 613 aa14.2□□□□□ -0.14
CPNE1-201ENST00000317677 CAPN7Q9Y6W3 813 aa14.2□□□□□ -0.14
CPNE1-201ENST00000317677 UBE4BO95155 1302 aa14.19□□□□□ -0.14
CPNE1-201ENST00000317677 KIF5CO60282 957 aa14.19□□□□□ -0.14
CPNE1-201ENST00000317677 NEBLO76041 1014 aa14.19□□□□□ -0.14
CPNE1-201ENST00000317677 ABL1P00519 1130 aa14.19□□□□□ -0.14
CPNE1-201ENST00000317677 NFIL3Q16649 462 aa14.19□□□□□ -0.14
CPNE1-201ENST00000317677 GNPTABQ3T906 1256 aa14.19□□□□□ -0.14
CPNE1-201ENST00000317677 XKR9Q5GH70 373 aa14.19□□□□□ -0.14
CPNE1-201ENST00000317677 SWSAP1Q6NVH7 229 aa14.19□□□□□ -0.14
CPNE1-201ENST00000317677 CYP26C1Q6V0L0 522 aa14.19□□□□□ -0.14
CPNE1-201ENST00000317677 SEPT14Q6ZU15 432 aa14.19□□□□□ -0.14
CPNE1-201ENST00000317677 COG1Q8WTW3 980 aa14.19□□□□□ -0.14
CPNE1-201ENST00000317677 CDHR1Q96JP9 859 aa14.19□□□□□ -0.14
CPNE1-201ENST00000317677 PCMTD1Q96MG8 357 aaPredicted RBP14.19□□□□□ -0.14
CPNE1-201ENST00000317677 MMRN2Q9H8L6 949 aa14.19□□□□□ -0.14
CPNE1-201ENST00000317677 DMAC2Q9NW81 257 aa14.19□□□□□ -0.14
CPNE1-201ENST00000317677 PUF60Q9UHX1 559 aaKnown RBP14.19□□□□□ -0.14
CPNE1-201ENST00000317677 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.19□□□□□ -0.14
CPNE1-201ENST00000317677 SYNGAP1Q96PV0 1343 aa14.19□□□□□ -0.14
CPNE1-201ENST00000317677 A0A1B0GUA9 196 aa14.18□□□□□ -0.14
CPNE1-201ENST00000317677 TISP43B9A030 160 aa14.18□□□□□ -0.14
CPNE1-201ENST00000317677 MEFVO15553 781 aaPredicted RBP14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms