RNA–Protein interactions for RNA: ENST00000316853.10

KLHDC4-202, Transcript of kelch domain containing 4, humanhuman

TSL 1 (best)

Gene KLHDC4, Length 1,287 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-202ENST00000316853 POU3F3P20264 500 aaPredicted RBP20.11■□□□□ 0.81
KLHDC4-202ENST00000316853 GRIN1Q05586 938 aa20.11■□□□□ 0.81
KLHDC4-202ENST00000316853 POU5F1BQ06416 359 aa20.11■□□□□ 0.81
KLHDC4-202ENST00000316853 FOXD4L5Q5VV16 416 aaPredicted RBP20.11■□□□□ 0.81
KLHDC4-202ENST00000316853 CABP7Q86V35 215 aa20.11■□□□□ 0.81
KLHDC4-202ENST00000316853 ABI1Q8IZP0 508 aa20.11■□□□□ 0.81
KLHDC4-202ENST00000316853 FOXD4L4Q8WXT5 416 aaPredicted RBP20.11■□□□□ 0.81
KLHDC4-202ENST00000316853 PNMA5Q96PV4 448 aa20.11■□□□□ 0.81
KLHDC4-202ENST00000316853 ZSCAN16Q9H4T2 348 aaPredicted RBP20.11■□□□□ 0.81
KLHDC4-202ENST00000316853 HOXA2O43364 376 aa20.1■□□□□ 0.81
KLHDC4-202ENST00000316853 EOMESO95936 686 aa20.1■□□□□ 0.81
KLHDC4-202ENST00000316853 MARCKSP29966 332 aaPredicted RBP20.1■□□□□ 0.81
KLHDC4-202ENST00000316853 MBTD1Q05BQ5 628 aa20.1■□□□□ 0.81
KLHDC4-202ENST00000316853 ZNF598Q86UK7 904 aaKnown RBP20.1■□□□□ 0.81
KLHDC4-202ENST00000316853 LPPQ93052 612 aa20.1■□□□□ 0.81
KLHDC4-202ENST00000316853 CPB2Q96IY4 423 aa20.1■□□□□ 0.81
KLHDC4-202ENST00000316853 AK8Q96MA6 479 aa20.1■□□□□ 0.81
KLHDC4-202ENST00000316853 NT5C3AQ9H0P0 336 aa20.1■□□□□ 0.81
KLHDC4-202ENST00000316853 FAM105AQ9NUU6 356 aa20.1■□□□□ 0.81
KLHDC4-202ENST00000316853 RNF19AQ9NV58 838 aa20.1■□□□□ 0.81
KLHDC4-202ENST00000316853 TYW1Q9NV66 732 aaKnown RBP20.1■□□□□ 0.81
KLHDC4-202ENST00000316853 HCSTQ9UBK5 93 aa20.1■□□□□ 0.81
KLHDC4-202ENST00000316853 A0A0C4DFX4 3053 aa20.1■□□□□ 0.81
KLHDC4-202ENST00000316853 ATG2AQ2TAZ0 1938 aa20.1■□□□□ 0.81
KLHDC4-202ENST00000316853 PLXNA4Q9HCM2 1894 aa20.09■□□□□ 0.81
KLHDC4-202ENST00000316853 TSPAN1O60635 241 aa20.09■□□□□ 0.81
KLHDC4-202ENST00000316853 SSBP05455 408 aaKnown RBP eCLIP20.09■□□□□ 0.81
KLHDC4-202ENST00000316853 RB1P06400 928 aa20.09■□□□□ 0.81
KLHDC4-202ENST00000316853 SKIP12755 728 aa20.09■□□□□ 0.81
KLHDC4-202ENST00000316853 ATF7P17544 494 aaPredicted RBP20.09■□□□□ 0.81
KLHDC4-202ENST00000316853 HOXA11P31270 313 aaPredicted RBP20.09■□□□□ 0.81
KLHDC4-202ENST00000316853 UBA7P41226 1012 aa20.09■□□□□ 0.81
KLHDC4-202ENST00000316853 NCBP1Q09161 790 aaKnown RBP20.09■□□□□ 0.81
KLHDC4-202ENST00000316853 PTPAQ15257 358 aa20.09■□□□□ 0.81
KLHDC4-202ENST00000316853 SKIV2LQ15477 1246 aaKnown RBP20.09■□□□□ 0.81
KLHDC4-202ENST00000316853 CLLU1OSQ5K130 101 aa20.09■□□□□ 0.81
KLHDC4-202ENST00000316853 HYIQ5T013 277 aa20.09■□□□□ 0.81
KLHDC4-202ENST00000316853 IFNLR1Q8IU57 520 aaPredicted RBP20.09■□□□□ 0.81
KLHDC4-202ENST00000316853 HELQQ8TDG4 1101 aa20.09■□□□□ 0.81
KLHDC4-202ENST00000316853 BSNDQ8WZ55 320 aa20.09■□□□□ 0.81
KLHDC4-202ENST00000316853 CASD1Q96PB1 797 aa20.09■□□□□ 0.81
KLHDC4-202ENST00000316853 C11orf84Q9BUA3 381 aaPredicted RBP20.09■□□□□ 0.81
KLHDC4-202ENST00000316853 TMEM117Q9H0C3 514 aa20.09■□□□□ 0.81
KLHDC4-202ENST00000316853 PRDM6Q9NQX0 595 aa20.09■□□□□ 0.81
KLHDC4-202ENST00000316853 C5orf67F2Z3F1 127 aa20.08■□□□□ 0.81
KLHDC4-202ENST00000316853 CSPG5O95196 566 aa20.08■□□□□ 0.81
KLHDC4-202ENST00000316853 LONP1P36776 959 aaKnown RBP20.08■□□□□ 0.81
KLHDC4-202ENST00000316853 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.08■□□□□ 0.819e-7■■■■■ 55
KLHDC4-202ENST00000316853 ZBTB8OSQ8IWT0 167 aa20.08■□□□□ 0.81
KLHDC4-202ENST00000316853 RASSF8Q8NHQ8 419 aa20.08■□□□□ 0.81
KLHDC4-202ENST00000316853 CALML4Q96GE6 196 aa20.08■□□□□ 0.81
KLHDC4-202ENST00000316853 IFT74Q96LB3 600 aa20.08■□□□□ 0.81
KLHDC4-202ENST00000316853 USP28Q96RU2 1077 aa20.08■□□□□ 0.81
KLHDC4-202ENST00000316853 TRAIPQ9BWF2 469 aa20.08■□□□□ 0.81
KLHDC4-202ENST00000316853 NFKBIZQ9BYH8 718 aa20.08■□□□□ 0.81
KLHDC4-202ENST00000316853 LMCD1Q9NZU5 365 aa20.08■□□□□ 0.81
KLHDC4-202ENST00000316853 PCDHB2Q9Y5E7 798 aa20.08■□□□□ 0.81
KLHDC4-202ENST00000316853 GRM6O15303 877 aa20.07■□□□□ 0.8
KLHDC4-202ENST00000316853 B4GALT5O43286 388 aa20.07■□□□□ 0.8
KLHDC4-202ENST00000316853 LIG1P18858 919 aa20.07■□□□□ 0.8
KLHDC4-202ENST00000316853 AXLP30530 894 aa20.07■□□□□ 0.8
KLHDC4-202ENST00000316853 RAB27AP51159 221 aa20.07■□□□□ 0.8
KLHDC4-202ENST00000316853 PCBP1Q15365 356 aaKnown RBP eCLIP20.07■□□□□ 0.8
KLHDC4-202ENST00000316853 PTPROQ16827 1216 aa20.07■□□□□ 0.8
KLHDC4-202ENST00000316853 SPECC1Q5M775 1068 aa20.07■□□□□ 0.8
KLHDC4-202ENST00000316853 UBXN11Q5T124 520 aa20.07■□□□□ 0.8
KLHDC4-202ENST00000316853 RINT1Q6NUQ1 792 aa20.07■□□□□ 0.8
KLHDC4-202ENST00000316853 NOTUMQ6P988 496 aa20.07■□□□□ 0.8
KLHDC4-202ENST00000316853 DEPTORQ8TB45 409 aa20.07■□□□□ 0.8
KLHDC4-202ENST00000316853 KIFAP3Q92845 792 aa20.07■□□□□ 0.8
KLHDC4-202ENST00000316853 RUSC1Q9BVN2 902 aa20.07■□□□□ 0.8
KLHDC4-202ENST00000316853 PLVAPQ9BX97 442 aa20.07■□□□□ 0.8
KLHDC4-202ENST00000316853 ALG13Q9NP73 1137 aaKnown RBP20.07■□□□□ 0.8
KLHDC4-202ENST00000316853 MEIS3P2A8K0S8 358 aa20.06■□□□□ 0.8
KLHDC4-202ENST00000316853 ZNF623O75123 536 aa20.06■□□□□ 0.8
KLHDC4-202ENST00000316853 HIP1RO75146 1068 aa20.06■□□□□ 0.8
KLHDC4-202ENST00000316853 ARF4P18085 180 aaPredicted RBP20.06■□□□□ 0.8
KLHDC4-202ENST00000316853 NAMPTP43490 491 aa20.06■□□□□ 0.8
KLHDC4-202ENST00000316853 RAD51AP2Q09MP3 1159 aa20.06■□□□□ 0.8
KLHDC4-202ENST00000316853 KARSQ15046 597 aaKnown RBP20.06■□□□□ 0.8
KLHDC4-202ENST00000316853 PPP2R5AQ15172 486 aa20.06■□□□□ 0.8
KLHDC4-202ENST00000316853 AMHR2Q16671 573 aa20.06■□□□□ 0.8
KLHDC4-202ENST00000316853 TMEM119Q4V9L6 283 aa20.06■□□□□ 0.8
KLHDC4-202ENST00000316853 LRRC55Q6ZSA7 311 aa20.06■□□□□ 0.8
KLHDC4-202ENST00000316853 C1orf186Q6ZWK4 172 aa20.06■□□□□ 0.8
KLHDC4-202ENST00000316853 CDR2LQ86X02 465 aaPredicted RBP20.06■□□□□ 0.8
KLHDC4-202ENST00000316853 KLHL23Q8NBE8 558 aa20.06■□□□□ 0.8
KLHDC4-202ENST00000316853 PGBD4Q96DM1 585 aa20.06■□□□□ 0.8
KLHDC4-202ENST00000316853 MRPL38Q96DV4 380 aaKnown RBP20.06■□□□□ 0.8
KLHDC4-202ENST00000316853 KIFC3Q9BVG8 833 aa20.06■□□□□ 0.8
KLHDC4-202ENST00000316853 CSRNP2Q9H175 543 aa20.06■□□□□ 0.8
KLHDC4-202ENST00000316853 C2orf40Q9H1Z8 148 aa20.06■□□□□ 0.8
KLHDC4-202ENST00000316853 CWH43Q9H720 699 aa20.06■□□□□ 0.8
KLHDC4-202ENST00000316853 AAASQ9NRG9 546 aa20.06■□□□□ 0.8
KLHDC4-202ENST00000316853 FBXO2Q9UK22 296 aaPredicted RBP20.06■□□□□ 0.8
KLHDC4-202ENST00000316853 INPP5FQ9Y2H2 1132 aa20.06■□□□□ 0.8
KLHDC4-202ENST00000316853 PCDHB12Q9Y5F1 795 aa20.06■□□□□ 0.8
KLHDC4-202ENST00000316853 PLA2G4BP0C869 781 aa20.05■□□□□ 0.8
KLHDC4-202ENST00000316853 DHX8Q14562 1220 aaKnown RBP20.05■□□□□ 0.8
KLHDC4-202ENST00000316853 TMEM132AQ24JP5 1023 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms