RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 RPS12P25398 132 aaKnown RBP6.66□□□□□ -1.34
PRKDC-201ENST00000314191 CCT5P48643 541 aa6.66□□□□□ -1.34
PRKDC-201ENST00000314191 DGKZQ13574 1117 aa6.66□□□□□ -1.34
PRKDC-201ENST00000314191 NEDD9Q14511 834 aa6.66□□□□□ -1.34
PRKDC-201ENST00000314191 FIGNQ5HY92 759 aa6.66□□□□□ -1.34
PRKDC-201ENST00000314191 ERICH1Q86X53 443 aa6.66□□□□□ -1.34
PRKDC-201ENST00000314191 RNF149Q8NC42 400 aa6.66□□□□□ -1.34
PRKDC-201ENST00000314191 RNF25Q96BH1 459 aaPredicted RBP6.66□□□□□ -1.34
PRKDC-201ENST00000314191 SLC5A4Q9NY91 659 aa6.66□□□□□ -1.34
PRKDC-201ENST00000314191 RBAKQ9NYW8 714 aaPredicted RBP6.66□□□□□ -1.34
PRKDC-201ENST00000314191 AGO2Q9UKV8 859 aaKnown RBP6.66□□□□□ -1.34
PRKDC-201ENST00000314191 LRRD1A4D1F6 860 aa6.66□□□□□ -1.34
PRKDC-201ENST00000314191 PPFIA4O75335 1185 aa6.66□□□□□ -1.34
PRKDC-201ENST00000314191 EPC2Q52LR7 807 aa6.66□□□□□ -1.34
PRKDC-201ENST00000314191 RBM12Q9NTZ6 932 aaKnown RBP6.66□□□□□ -1.34
PRKDC-201ENST00000314191 ANAPC5Q9UJX4 755 aa6.66□□□□□ -1.34
PRKDC-201ENST00000314191 LRRC10BA6NIK2 292 aa6.66□□□□□ -1.34
PRKDC-201ENST00000314191 PPP1R11O60927 126 aaPredicted RBP6.66□□□□□ -1.34
PRKDC-201ENST00000314191 CYP4F22Q6NT55 531 aa6.66□□□□□ -1.34
PRKDC-201ENST00000314191 ELMO3Q96BJ8 720 aa6.66□□□□□ -1.34
PRKDC-201ENST00000314191 MIF4GDA9UHW6 222 aaKnown RBP6.65□□□□□ -1.34
PRKDC-201ENST00000314191 SOX10P56693 466 aa6.65□□□□□ -1.34
PRKDC-201ENST00000314191 NFX1Q12986 1120 aaKnown RBP6.65□□□□□ -1.34
PRKDC-201ENST00000314191 CROCCP2Q86T23 111 aa6.65□□□□□ -1.34
PRKDC-201ENST00000314191 CBWD1Q9BRT8 395 aa6.65□□□□□ -1.34
PRKDC-201ENST00000314191 AGPAT3Q9NRZ7 376 aa6.65□□□□□ -1.34
PRKDC-201ENST00000314191 EML1O00423 815 aa6.65□□□□□ -1.34
PRKDC-201ENST00000314191 GGCXP38435 758 aa6.65□□□□□ -1.34
PRKDC-201ENST00000314191 NPY5RQ15761 445 aa6.65□□□□□ -1.34
PRKDC-201ENST00000314191 EMBQ6PCB8 327 aa6.65□□□□□ -1.34
PRKDC-201ENST00000314191 RPF1Q9H9Y2 349 aaKnown RBP6.65□□□□□ -1.34
PRKDC-201ENST00000314191 APEX2Q9UBZ4 518 aa6.65□□□□□ -1.34
PRKDC-201ENST00000314191 PON1P27169 355 aa6.65□□□□□ -1.34
PRKDC-201ENST00000314191 HNRNPH2P55795 449 aaKnown RBP6.65□□□□□ -1.34
PRKDC-201ENST00000314191 PPP2R5DQ14738 602 aa6.65□□□□□ -1.34
PRKDC-201ENST00000314191 ZNF667Q5HYK9 610 aa6.65□□□□□ -1.34
PRKDC-201ENST00000314191 OTOP1Q7RTM1 612 aa6.65□□□□□ -1.34
PRKDC-201ENST00000314191 TRIM59Q8IWR1 403 aa6.65□□□□□ -1.34
PRKDC-201ENST00000314191 CCDC89Q8N998 374 aa6.65□□□□□ -1.34
PRKDC-201ENST00000314191 SLC30A5Q8TAD4 765 aa6.65□□□□□ -1.34
PRKDC-201ENST00000314191 MED15Q96RN5 788 aa6.65□□□□□ -1.34
PRKDC-201ENST00000314191 MRPL47Q9HD33 250 aaKnown RBP6.65□□□□□ -1.34
PRKDC-201ENST00000314191 HOMER3Q9NSC5 361 aa6.65□□□□□ -1.34
PRKDC-201ENST00000314191 M0QZ92 97 aa6.65□□□□□ -1.34
PRKDC-201ENST00000314191 DGAT1O75907 488 aa6.65□□□□□ -1.34
PRKDC-201ENST00000314191 GLE1Q53GS7 698 aaKnown RBP6.65□□□□□ -1.34
PRKDC-201ENST00000314191 TAOK1Q7L7X3 1001 aa6.65□□□□□ -1.34
PRKDC-201ENST00000314191 CALN1Q9BXU9 219 aa6.65□□□□□ -1.34
PRKDC-201ENST00000314191 TXNP10599 105 aaKnown RBP6.65□□□□□ -1.34
PRKDC-201ENST00000314191 STX2P32856 288 aa6.65□□□□□ -1.34
PRKDC-201ENST00000314191 MOV10L1Q9BXT6 1211 aaKnown RBP6.65□□□□□ -1.34
PRKDC-201ENST00000314191 SPON1Q9HCB6 807 aa6.65□□□□□ -1.34
PRKDC-201ENST00000314191 TXNDC16Q9P2K2 825 aa6.65□□□□□ -1.34
PRKDC-201ENST00000314191 AMACRQ9UHK6 382 aa6.65□□□□□ -1.34
PRKDC-201ENST00000314191 FOXN3O00409 490 aaPredicted RBP6.65□□□□□ -1.34
PRKDC-201ENST00000314191 DDNO94850 711 aaPredicted RBP6.65□□□□□ -1.34
PRKDC-201ENST00000314191 MNAT1P51948 309 aa6.65□□□□□ -1.34
PRKDC-201ENST00000314191 BACE1P56817 501 aa6.65□□□□□ -1.34
PRKDC-201ENST00000314191 NAB2Q15742 525 aa6.65□□□□□ -1.34
PRKDC-201ENST00000314191 ECM1Q16610 540 aa6.65□□□□□ -1.34
PRKDC-201ENST00000314191 TCP11Q8WWU5 503 aa6.65□□□□□ -1.34
PRKDC-201ENST00000314191 JPH1Q9HDC5 661 aaPredicted RBP6.65□□□□□ -1.34
PRKDC-201ENST00000314191 KCNMB3Q9NPA1 279 aa6.65□□□□□ -1.34
PRKDC-201ENST00000314191 RNF225M0QZC1 329 aaPredicted RBP6.65□□□□□ -1.35
PRKDC-201ENST00000314191 EIF3DO15371 548 aaKnown RBP eCLIP6.65□□□□□ -1.357e-8■□□□□ 10.8
PRKDC-201ENST00000314191 HHATQ5VTY9 493 aa6.65□□□□□ -1.35
PRKDC-201ENST00000314191 ZNF720Q7Z2F6 126 aa6.65□□□□□ -1.35
PRKDC-201ENST00000314191 SYTL5Q8TDW5 730 aaPredicted RBP6.65□□□□□ -1.35
PRKDC-201ENST00000314191 RASSF4Q9H2L5 321 aa6.65□□□□□ -1.35
PRKDC-201ENST00000314191 USP20Q9Y2K6 914 aa6.65□□□□□ -1.35
PRKDC-201ENST00000314191 POC1B-GALNT4F8VUJ3 575 aa6.65□□□□□ -1.35
PRKDC-201ENST00000314191 CA8P35219 290 aa6.65□□□□□ -1.35
PRKDC-201ENST00000314191 IFRD2Q12894 506 aaPredicted RBP6.65□□□□□ -1.35
PRKDC-201ENST00000314191 BSPRYQ5W0U4 402 aa6.65□□□□□ -1.35
PRKDC-201ENST00000314191 TRIM65Q6PJ69 517 aa6.65□□□□□ -1.35
PRKDC-201ENST00000314191 CTAGE3PQ8IX95 158 aa6.65□□□□□ -1.35
PRKDC-201ENST00000314191 TMEM35BQ8NCS4 154 aa6.65□□□□□ -1.35
PRKDC-201ENST00000314191 SPATA20Q8TB22 786 aa6.65□□□□□ -1.35
PRKDC-201ENST00000314191 HAUS1Q96CS2 278 aa6.65□□□□□ -1.35
PRKDC-201ENST00000314191 HEXIM2Q96MH2 286 aaKnown RBP6.65□□□□□ -1.35
PRKDC-201ENST00000314191 EPHB6O15197 1021 aa6.65□□□□□ -1.35
PRKDC-201ENST00000314191 CASP5P51878 434 aa6.65□□□□□ -1.35
PRKDC-201ENST00000314191 PDCLQ13371 301 aa6.65□□□□□ -1.35
PRKDC-201ENST00000314191 RFX6Q8HWS3 928 aa6.65□□□□□ -1.35
PRKDC-201ENST00000314191 CBWD2Q8IUF1 395 aa6.65□□□□□ -1.35
PRKDC-201ENST00000314191 ZNF564Q8TBZ8 553 aaPredicted RBP6.65□□□□□ -1.35
PRKDC-201ENST00000314191 ZWILCHQ9H900 591 aa6.65□□□□□ -1.35
PRKDC-201ENST00000314191 TRAF3IP3Q9Y228 551 aa6.65□□□□□ -1.35
PRKDC-201ENST00000314191 VCAM1P19320 739 aa6.65□□□□□ -1.35
PRKDC-201ENST00000314191 PRKCEQ02156 737 aa6.65□□□□□ -1.35
PRKDC-201ENST00000314191 C1orf54Q8WWF1 131 aa6.65□□□□□ -1.35
PRKDC-201ENST00000314191 PLCB1Q9NQ66 1216 aa6.65□□□□□ -1.35
PRKDC-201ENST00000314191 NOC2LQ9Y3T9 749 aaKnown RBP6.65□□□□□ -1.35
PRKDC-201ENST00000314191 GNA15P30679 374 aa6.65□□□□□ -1.35
PRKDC-201ENST00000314191 PNKPQ96T60 521 aa6.65□□□□□ -1.35
PRKDC-201ENST00000314191 CATSPER4Q7RTX7 472 aa6.64□□□□□ -1.35
PRKDC-201ENST00000314191 FAM167AQ96KS9 214 aa6.64□□□□□ -1.35
PRKDC-201ENST00000314191 SPATA33Q96N06 139 aa6.64□□□□□ -1.35
PRKDC-201ENST00000314191 TSNARE1Q96NA8 513 aa6.64□□□□□ -1.35
PRKDC-201ENST00000314191 KIF20BQ96Q89 1820 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms