RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 PAX3P23760 479 aa9.39□□□□□ -0.91
COL6A5-202ENST00000312481 RXRGP48443 463 aa9.39□□□□□ -0.91
COL6A5-202ENST00000312481 TMED1Q13445 227 aa9.39□□□□□ -0.91
COL6A5-202ENST00000312481 ABCB5Q2M3G0 1257 aa9.39□□□□□ -0.91
COL6A5-202ENST00000312481 CASC4Q6P4E1 433 aa9.39□□□□□ -0.91
COL6A5-202ENST00000312481 ELMSAN1Q6PJG2 1045 aa9.39□□□□□ -0.91
COL6A5-202ENST00000312481 STAG2Q8N3U4 1231 aa9.39□□□□□ -0.91
COL6A5-202ENST00000312481 SLCO1B7G3V0H7 640 aa9.39□□□□□ -0.91
COL6A5-202ENST00000312481 PAPOLAP51003 745 aaKnown RBP9.39□□□□□ -0.91
COL6A5-202ENST00000312481 PURAQ00577 322 aaKnown RBP9.39□□□□□ -0.91
COL6A5-202ENST00000312481 RSPH3Q86UC2 560 aa9.39□□□□□ -0.91
COL6A5-202ENST00000312481 ZNF518BQ9C0D4 1074 aa9.39□□□□□ -0.91
COL6A5-202ENST00000312481 STN1Q9H668 368 aaKnown RBP9.39□□□□□ -0.91
COL6A5-202ENST00000312481 PLEKHA5Q9HAU0 1116 aa9.39□□□□□ -0.91
COL6A5-202ENST00000312481 EHD2Q9NZN4 543 aa9.39□□□□□ -0.91
COL6A5-202ENST00000312481 PNMA3Q9UL41 463 aa9.39□□□□□ -0.91
COL6A5-202ENST00000312481 PLAAQ9Y263 795 aa9.39□□□□□ -0.91
COL6A5-202ENST00000312481 IVNS1ABPQ9Y6Y0 642 aa9.39□□□□□ -0.91
COL6A5-202ENST00000312481 ADAMTS2O95450 1211 aa9.39□□□□□ -0.91
COL6A5-202ENST00000312481 ATP6V0A4Q9HBG4 840 aa9.39□□□□□ -0.91
COL6A5-202ENST00000312481 KCNJ14Q9UNX9 436 aa9.39□□□□□ -0.91
COL6A5-202ENST00000312481 NR3C1P04150 777 aa9.39□□□□□ -0.91
COL6A5-202ENST00000312481 ZFP1Q6P2D0 407 aa9.39□□□□□ -0.91
COL6A5-202ENST00000312481 C16orf89Q6UX73 402 aa9.39□□□□□ -0.91
COL6A5-202ENST00000312481 MAGEC3Q8TD91 643 aa9.39□□□□□ -0.91
COL6A5-202ENST00000312481 RAD54LQ92698 747 aa9.39□□□□□ -0.91
COL6A5-202ENST00000312481 TRIM45Q9H8W5 580 aaPredicted RBP9.39□□□□□ -0.91
COL6A5-202ENST00000312481 NLRC4Q9NPP4 1024 aa9.39□□□□□ -0.91
COL6A5-202ENST00000312481 NEDD4P46934 1319 aa9.39□□□□□ -0.91
COL6A5-202ENST00000312481 TMCC1O94876 653 aa9.38□□□□□ -0.91
COL6A5-202ENST00000312481 TSHRP16473 764 aa9.38□□□□□ -0.91
COL6A5-202ENST00000312481 HOXB8P17481 243 aaPredicted RBP9.38□□□□□ -0.91
COL6A5-202ENST00000312481 LSP1P33241 339 aa9.38□□□□□ -0.91
COL6A5-202ENST00000312481 SOX5P35711 763 aa9.38□□□□□ -0.91
COL6A5-202ENST00000312481 ECE1P42892 770 aa9.38□□□□□ -0.91
COL6A5-202ENST00000312481 PKP1Q13835 747 aa9.38□□□□□ -0.91
COL6A5-202ENST00000312481 HSP90AA4PQ58FG1 418 aa9.38□□□□□ -0.91
COL6A5-202ENST00000312481 ARHGEF16Q5VV41 709 aa9.38□□□□□ -0.91
COL6A5-202ENST00000312481 SH3TC2Q8TF17 1288 aa9.38□□□□□ -0.91
COL6A5-202ENST00000312481 ATP2C2O75185 946 aa9.38□□□□□ -0.91
COL6A5-202ENST00000312481 GPC4O75487 556 aa9.38□□□□□ -0.91
COL6A5-202ENST00000312481 FGGP02679 453 aa9.38□□□□□ -0.91
COL6A5-202ENST00000312481 CCZ1BP86790 482 aa9.38□□□□□ -0.91
COL6A5-202ENST00000312481 CCZ1P86791 482 aaPredicted RBP9.38□□□□□ -0.91
COL6A5-202ENST00000312481 ART3Q13508 389 aa9.38□□□□□ -0.91
COL6A5-202ENST00000312481 CDKL3Q8IVW4 592 aaPredicted RBP9.38□□□□□ -0.91
COL6A5-202ENST00000312481 SOWAHDA6NJG2 315 aa9.38□□□□□ -0.91
COL6A5-202ENST00000312481 CLASP2O75122 1294 aaKnown RBP9.38□□□□□ -0.91
COL6A5-202ENST00000312481 FCGR1AP12314 374 aa9.38□□□□□ -0.91
COL6A5-202ENST00000312481 KRT4P19013 534 aa9.38□□□□□ -0.91
COL6A5-202ENST00000312481 SERPINB3P29508 390 aa9.38□□□□□ -0.91
COL6A5-202ENST00000312481 MED21Q13503 144 aa9.38□□□□□ -0.91
COL6A5-202ENST00000312481 FRA10AC1Q70Z53 315 aa9.38□□□□□ -0.91
COL6A5-202ENST00000312481 RASA4BC9J798 803 aa9.38□□□□□ -0.91
COL6A5-202ENST00000312481 RASA4O43374 803 aa9.38□□□□□ -0.91
COL6A5-202ENST00000312481 SRGAP2CP0DJJ0 459 aa9.38□□□□□ -0.91
COL6A5-202ENST00000312481 PMS2P54278 862 aa9.38□□□□□ -0.91
COL6A5-202ENST00000312481 MORF4L2Q15014 288 aa9.38□□□□□ -0.91
COL6A5-202ENST00000312481 UAP1Q16222 522 aaPredicted RBP9.38□□□□□ -0.91
COL6A5-202ENST00000312481 SLC27A3Q5K4L6 730 aa9.38□□□□□ -0.91
COL6A5-202ENST00000312481 TPH2Q8IWU9 490 aa9.38□□□□□ -0.91
COL6A5-202ENST00000312481 ZSWIM5Q9P217 1185 aa9.38□□□□□ -0.91
COL6A5-202ENST00000312481 SUN2Q9UH99 717 aa9.38□□□□□ -0.91
COL6A5-202ENST00000312481 FEM1BQ9UK73 627 aa9.38□□□□□ -0.91
COL6A5-202ENST00000312481 PRPSAP2O60256 369 aa9.38□□□□□ -0.91
COL6A5-202ENST00000312481 MCF2P10911 925 aa9.38□□□□□ -0.91
COL6A5-202ENST00000312481 PRR16Q569H4 304 aa9.38□□□□□ -0.91
COL6A5-202ENST00000312481 DCLRE1BQ9H816 532 aa9.38□□□□□ -0.91
COL6A5-202ENST00000312481 HNRNPH2P55795 449 aaKnown RBP9.38□□□□□ -0.91
COL6A5-202ENST00000312481 TRMT5Q32P41 509 aaKnown RBP9.38□□□□□ -0.91
COL6A5-202ENST00000312481 TKFCQ3LXA3 575 aa9.38□□□□□ -0.91
COL6A5-202ENST00000312481 TRMT44Q8IYL2 757 aaKnown RBP9.38□□□□□ -0.91
COL6A5-202ENST00000312481 ZFRQ96KR1 1074 aaKnown RBP9.38□□□□□ -0.91
COL6A5-202ENST00000312481 CYTH2Q99418 400 aa9.38□□□□□ -0.91
COL6A5-202ENST00000312481 TRIM9Q9C026 710 aa9.38□□□□□ -0.91
COL6A5-202ENST00000312481 M0R3G1 203 aa9.38□□□□□ -0.91
COL6A5-202ENST00000312481 SGK1O00141 431 aa9.38□□□□□ -0.91
COL6A5-202ENST00000312481 MAP3K13O43283 966 aa9.38□□□□□ -0.91
COL6A5-202ENST00000312481 GGCXP38435 758 aa9.38□□□□□ -0.91
COL6A5-202ENST00000312481 CHRNDQ07001 517 aa9.38□□□□□ -0.91
COL6A5-202ENST00000312481 MCL1Q07820 350 aa9.38□□□□□ -0.91
COL6A5-202ENST00000312481 DPYDQ12882 1025 aa9.38□□□□□ -0.91
COL6A5-202ENST00000312481 ACBD5Q5T8D3 534 aaPredicted RBP9.38□□□□□ -0.91
COL6A5-202ENST00000312481 PPM1KQ8N3J5 372 aa9.38□□□□□ -0.91
COL6A5-202ENST00000312481 CCNL1Q9UK58 526 aaPredicted RBP9.38□□□□□ -0.91
COL6A5-202ENST00000312481 PAIP2BQ9ULR5 123 aaKnown RBP9.38□□□□□ -0.91
COL6A5-202ENST00000312481 PDE1BQ01064 536 aa9.37□□□□□ -0.91
COL6A5-202ENST00000312481 TLR3O15455 904 aaKnown RBP9.37□□□□□ -0.91
COL6A5-202ENST00000312481 BMP3P12645 472 aa9.37□□□□□ -0.91
COL6A5-202ENST00000312481 ATP1A2P50993 1020 aa9.37□□□□□ -0.91
COL6A5-202ENST00000312481 EIF6P56537 245 aaKnown RBP9.37□□□□□ -0.91
COL6A5-202ENST00000312481 PCBP1Q15365 356 aaKnown RBP eCLIP9.37□□□□□ -0.91
COL6A5-202ENST00000312481 TOPORSQ9NS56 1045 aaPredicted RBP9.37□□□□□ -0.91
COL6A5-202ENST00000312481 PSMC3IPQ9P2W1 217 aaPredicted RBP9.37□□□□□ -0.91
COL6A5-202ENST00000312481 RIMBP3CA6NJZ7 1639 aa9.37□□□□□ -0.91
COL6A5-202ENST00000312481 RIMBP3BA6NNM3 1639 aa9.37□□□□□ -0.91
COL6A5-202ENST00000312481 RIMBP3Q9UFD9 1639 aa9.37□□□□□ -0.91
COL6A5-202ENST00000312481 M0R2C6 588 aa9.37□□□□□ -0.91
COL6A5-202ENST00000312481 DRG2P55039 364 aaKnown RBP9.37□□□□□ -0.91
COL6A5-202ENST00000312481 CCDC144BQ3MJ40 725 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms