RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 ACER1Q8TDN7 264 aa11.47□□□□□ -0.57
SYNPO2-201ENST00000307142 RUNDC3BQ96NL0 473 aa11.47□□□□□ -0.57
SYNPO2-201ENST00000307142 MXRA8Q9BRK3 442 aa11.47□□□□□ -0.57
SYNPO2-201ENST00000307142 SLC7A5P2Q9GIP4 190 aa11.47□□□□□ -0.57
SYNPO2-201ENST00000307142 DNAJC12Q9UKB3 198 aa11.47□□□□□ -0.57
SYNPO2-201ENST00000307142 RCOR1Q9UKL0 485 aa11.47□□□□□ -0.57
SYNPO2-201ENST00000307142 APOEP02649 317 aa11.47□□□□□ -0.57
SYNPO2-201ENST00000307142 INPP5BP32019 993 aa11.47□□□□□ -0.57
SYNPO2-201ENST00000307142 GUCY1A2P33402 732 aa11.47□□□□□ -0.57
SYNPO2-201ENST00000307142 EMC2Q15006 297 aa11.47□□□□□ -0.57
SYNPO2-201ENST00000307142 DCAF4L1Q3SXM0 396 aa11.47□□□□□ -0.57
SYNPO2-201ENST00000307142 MGAT5BQ3V5L5 792 aa11.47□□□□□ -0.57
SYNPO2-201ENST00000307142 BBOF1Q8ND07 529 aa11.47□□□□□ -0.57
SYNPO2-201ENST00000307142 ZNF467Q7Z7K2 595 aaPredicted RBP11.47□□□□□ -0.57
SYNPO2-201ENST00000307142 TADA2BQ86TJ2 420 aa11.47□□□□□ -0.57
SYNPO2-201ENST00000307142 ANKRD42Q8N9B4 389 aa11.47□□□□□ -0.57
SYNPO2-201ENST00000307142 CFAP36Q96G28 342 aa11.47□□□□□ -0.57
SYNPO2-201ENST00000307142 MTA3Q9BTC8 594 aa11.47□□□□□ -0.57
SYNPO2-201ENST00000307142 FSD1LQ9BXM9 530 aa11.47□□□□□ -0.57
SYNPO2-201ENST00000307142 SP110Q9HB58 689 aa11.47□□□□□ -0.57
SYNPO2-201ENST00000307142 TMEM39AQ9NV64 488 aa11.47□□□□□ -0.57
SYNPO2-201ENST00000307142 PIK3R2O00459 728 aa11.47□□□□□ -0.57
SYNPO2-201ENST00000307142 NFIAQ12857 509 aa11.47□□□□□ -0.57
SYNPO2-201ENST00000307142 HAUS6Q7Z4H7 955 aa11.47□□□□□ -0.57
SYNPO2-201ENST00000307142 MCUQ8NE86 351 aa11.47□□□□□ -0.57
SYNPO2-201ENST00000307142 SIK2Q9H0K1 926 aa11.47□□□□□ -0.57
SYNPO2-201ENST00000307142 ADAM22Q9P0K1 906 aa11.47□□□□□ -0.57
SYNPO2-201ENST00000307142 RSPH14Q9UHP6 348 aa11.47□□□□□ -0.57
SYNPO2-201ENST00000307142 SCINQ9Y6U3 715 aa11.47□□□□□ -0.57
SYNPO2-201ENST00000307142 IFT172Q9UG01 1749 aa11.47□□□□□ -0.57
SYNPO2-201ENST00000307142 LRG1P02750 347 aa11.47□□□□□ -0.57
SYNPO2-201ENST00000307142 C17orf53Q8N3J3 647 aaPredicted RBP11.47□□□□□ -0.57
SYNPO2-201ENST00000307142 TSC1Q92574 1164 aa11.47□□□□□ -0.57
SYNPO2-201ENST00000307142 TNIP3Q96KP6 325 aa11.47□□□□□ -0.57
SYNPO2-201ENST00000307142 SLC38A7Q9NVC3 462 aa11.47□□□□□ -0.57
SYNPO2-201ENST00000307142 ASNSD1Q9NWL6 643 aa11.47□□□□□ -0.57
SYNPO2-201ENST00000307142 FZD1Q9UP38 647 aa11.47□□□□□ -0.57
SYNPO2-201ENST00000307142 PPP2R2CQ9Y2T4 447 aa11.47□□□□□ -0.57
SYNPO2-201ENST00000307142 DGAT1O75907 488 aa11.46□□□□□ -0.57
SYNPO2-201ENST00000307142 CD2BP2O95400 341 aaKnown RBP11.46□□□□□ -0.57
SYNPO2-201ENST00000307142 VCAM1P19320 739 aa11.46□□□□□ -0.57
SYNPO2-201ENST00000307142 PDE1BQ01064 536 aa11.46□□□□□ -0.57
SYNPO2-201ENST00000307142 BCL9O00512 1426 aa11.46□□□□□ -0.57
SYNPO2-201ENST00000307142 EYA4O95677 639 aa11.46□□□□□ -0.57
SYNPO2-201ENST00000307142 ZBED1O96006 694 aa11.46□□□□□ -0.57
SYNPO2-201ENST00000307142 INHBAP08476 426 aa11.46□□□□□ -0.57
SYNPO2-201ENST00000307142 SPON2Q9BUD6 331 aa11.46□□□□□ -0.57
SYNPO2-201ENST00000307142 LSM7Q9UK45 103 aaKnown RBP11.46□□□□□ -0.57
SYNPO2-201ENST00000307142 RGS16O15492 202 aaPredicted RBP11.46□□□□□ -0.57
SYNPO2-201ENST00000307142 NPTXRO95502 500 aa11.46□□□□□ -0.57
SYNPO2-201ENST00000307142 RAG1P15918 1043 aa11.46□□□□□ -0.57
SYNPO2-201ENST00000307142 CAPN2P17655 700 aa11.46□□□□□ -0.57
SYNPO2-201ENST00000307142 ACOT2P49753 483 aa11.46□□□□□ -0.57
SYNPO2-201ENST00000307142 COG7P83436 770 aa11.46□□□□□ -0.57
SYNPO2-201ENST00000307142 SATB1Q01826 763 aa11.46□□□□□ -0.57
SYNPO2-201ENST00000307142 SF3A3Q12874 501 aaKnown RBP eCLIP11.46□□□□□ -0.57
SYNPO2-201ENST00000307142 C10orf76Q5T2E6 689 aa11.46□□□□□ -0.57
SYNPO2-201ENST00000307142 LMBRD2Q68DH5 695 aaPredicted RBP11.46□□□□□ -0.57
SYNPO2-201ENST00000307142 NOTUMQ6P988 496 aa11.46□□□□□ -0.57
SYNPO2-201ENST00000307142 TMEM35BQ8NCS4 154 aa11.46□□□□□ -0.57
SYNPO2-201ENST00000307142 AGAP1Q9UPQ3 857 aa11.46□□□□□ -0.57
SYNPO2-201ENST00000307142 CEMIPQ8WUJ3 1361 aa11.46□□□□□ -0.58
SYNPO2-201ENST00000307142 WNT10BO00744 389 aa11.46□□□□□ -0.58
SYNPO2-201ENST00000307142 ADCY1Q08828 1119 aa11.46□□□□□ -0.58
SYNPO2-201ENST00000307142 CDCA5Q96FF9 252 aa11.46□□□□□ -0.58
SYNPO2-201ENST00000307142 RFC5P40937 340 aa11.46□□□□□ -0.58
SYNPO2-201ENST00000307142 PSMD6Q15008 389 aa11.46□□□□□ -0.58
SYNPO2-201ENST00000307142 CEP85LQ5SZL2 805 aa11.46□□□□□ -0.58
SYNPO2-201ENST00000307142 CCDC62Q6P9F0 684 aa11.46□□□□□ -0.58
SYNPO2-201ENST00000307142 NHEJ1Q9H9Q4 299 aaPredicted RBP11.46□□□□□ -0.58
SYNPO2-201ENST00000307142 JMJD4Q9H9V9 463 aa11.46□□□□□ -0.58
SYNPO2-201ENST00000307142 POC1B-GALNT4F8VUJ3 575 aa11.45□□□□□ -0.58
SYNPO2-201ENST00000307142 GPR182O15218 404 aa11.45□□□□□ -0.58
SYNPO2-201ENST00000307142 KRT71Q3SY84 523 aa11.45□□□□□ -0.58
SYNPO2-201ENST00000307142 KSR1Q8IVT5 923 aa11.45□□□□□ -0.58
SYNPO2-201ENST00000307142 RPGRIP1Q96KN7 1286 aa11.45□□□□□ -0.58
SYNPO2-201ENST00000307142 HINFPQ9BQA5 517 aa11.45□□□□□ -0.58
SYNPO2-201ENST00000307142 TIPINQ9BVW5 301 aa11.45□□□□□ -0.58
SYNPO2-201ENST00000307142 SRGAP2O75044 1071 aa11.45□□□□□ -0.58
SYNPO2-201ENST00000307142 IGSF3O75054 1194 aa11.45□□□□□ -0.58
SYNPO2-201ENST00000307142 PDGFRBP09619 1106 aa11.45□□□□□ -0.58
SYNPO2-201ENST00000307142 SKIP12755 728 aa11.45□□□□□ -0.58
SYNPO2-201ENST00000307142 NLRP11P59045 1033 aaKnown RBP11.45□□□□□ -0.58
SYNPO2-201ENST00000307142 TMTC4Q5T4D3 741 aa11.45□□□□□ -0.58
SYNPO2-201ENST00000307142 UHMK1Q8TAS1 419 aaKnown RBP11.45□□□□□ -0.58
SYNPO2-201ENST00000307142 ZNF512Q96ME7 567 aaPredicted RBP11.45□□□□□ -0.58
SYNPO2-201ENST00000307142 RNF208Q9H0X6 261 aa11.45□□□□□ -0.58
SYNPO2-201ENST00000307142 SH3BP1Q9Y3L3 701 aa11.45□□□□□ -0.58
SYNPO2-201ENST00000307142 HMBSP08397 361 aa11.45□□□□□ -0.58
SYNPO2-201ENST00000307142 ST8SIA6P61647 398 aa11.45□□□□□ -0.58
SYNPO2-201ENST00000307142 TRIM62Q9BVG3 475 aa11.45□□□□□ -0.58
SYNPO2-201ENST00000307142 SYNGAP1Q96PV0 1343 aa11.45□□□□□ -0.58
SYNPO2-201ENST00000307142 MAFGO15525 162 aa11.45□□□□□ -0.58
SYNPO2-201ENST00000307142 ASAP2O43150 1006 aa11.45□□□□□ -0.58
SYNPO2-201ENST00000307142 SDE2Q6IQ49 451 aa11.45□□□□□ -0.58
SYNPO2-201ENST00000307142 SGMS1Q86VZ5 419 aa11.45□□□□□ -0.58
SYNPO2-201ENST00000307142 STKLD1Q8NE28 680 aa11.45□□□□□ -0.58
SYNPO2-201ENST00000307142 KLHL8Q9P2G9 620 aaPredicted RBP11.45□□□□□ -0.58
SYNPO2-201ENST00000307142 STAP1Q9ULZ2 295 aa11.45□□□□□ -0.58
SYNPO2-201ENST00000307142 DISP2A7MBM2 1401 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms