RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 OSBPL9Q96SU4 736 aa17.04■□□□□ 0.32
USP42-201ENST00000306177 HEMGNQ9BXL5 484 aa17.04■□□□□ 0.32
USP42-201ENST00000306177 IL25Q9H293 177 aa17.04■□□□□ 0.32
USP42-201ENST00000306177 TXLNGQ9NUQ3 528 aa17.04■□□□□ 0.32
USP42-201ENST00000306177 DONSONQ9NYP3 566 aa17.04■□□□□ 0.32
USP42-201ENST00000306177 GRID2IPA4D2P6 1211 aa17.03■□□□□ 0.32
USP42-201ENST00000306177 CAV1Q03135 178 aa17.03■□□□□ 0.32
USP42-201ENST00000306177 MMP19Q99542 508 aa17.03■□□□□ 0.32
USP42-201ENST00000306177 RPAP3Q9H6T3 665 aaPredicted RBP17.03■□□□□ 0.32
USP42-201ENST00000306177 PDXKO00764 312 aa17.03■□□□□ 0.32
USP42-201ENST00000306177 KRT37O76014 449 aa17.03■□□□□ 0.32
USP42-201ENST00000306177 TWF2Q6IBS0 349 aaKnown RBP17.03■□□□□ 0.32
USP42-201ENST00000306177 SAAL1Q96ER3 474 aa17.03■□□□□ 0.32
USP42-201ENST00000306177 TRIM9Q9C026 710 aa17.03■□□□□ 0.32
USP42-201ENST00000306177 FAM205CA6NFA0 338 aa17.03■□□□□ 0.32
USP42-201ENST00000306177 MYBL1P10243 752 aa17.03■□□□□ 0.32
USP42-201ENST00000306177 GNA15P30679 374 aa17.03■□□□□ 0.32
USP42-201ENST00000306177 RWDD4Q6NW29 188 aaKnown RBP17.03■□□□□ 0.32
USP42-201ENST00000306177 TTC39CQ8N584 583 aa17.03■□□□□ 0.32
USP42-201ENST00000306177 MORC4Q8TE76 937 aa17.03■□□□□ 0.32
USP42-201ENST00000306177 ELF1P32519 619 aa17.03■□□□□ 0.32
USP42-201ENST00000306177 ATG16L1Q676U5 607 aa17.03■□□□□ 0.32
USP42-201ENST00000306177 HAUS6Q7Z4H7 955 aa17.03■□□□□ 0.32
USP42-201ENST00000306177 CAPN11Q9UMQ6 739 aa17.03■□□□□ 0.32
USP42-201ENST00000306177 EPHB1P54762 984 aa17.02■□□□□ 0.32
USP42-201ENST00000306177 ANKRD40Q6AI12 368 aa17.02■□□□□ 0.32
USP42-201ENST00000306177 PDXDC1Q6P996 788 aa17.02■□□□□ 0.32
USP42-201ENST00000306177 CLEC10AQ8IUN9 316 aa17.02■□□□□ 0.32
USP42-201ENST00000306177 DHX38Q92620 1227 aaKnown RBP17.02■□□□□ 0.32
USP42-201ENST00000306177 OTUD5Q96G74 571 aa17.02■□□□□ 0.32
USP42-201ENST00000306177 EPS15L1Q9UBC2 864 aa17.02■□□□□ 0.32
USP42-201ENST00000306177 PRKAG2Q9UGJ0 569 aa17.02■□□□□ 0.32
USP42-201ENST00000306177 A0A0G2JLW4 131 aa17.02■□□□□ 0.32
USP42-201ENST00000306177 FTLP02792 175 aaPredicted RBP17.02■□□□□ 0.32
USP42-201ENST00000306177 AP3M2P53677 418 aa17.02■□□□□ 0.32
USP42-201ENST00000306177 SPATA33Q96N06 139 aa17.02■□□□□ 0.32
USP42-201ENST00000306177 SLC9A2Q9UBY0 812 aa17.02■□□□□ 0.32
USP42-201ENST00000306177 TAF6LQ9Y6J9 622 aa17.02■□□□□ 0.32
USP42-201ENST00000306177 LUC7L3O95232 432 aaKnown RBP17.02■□□□□ 0.32
USP42-201ENST00000306177 CDC42EP5Q6NZY7 148 aa17.02■□□□□ 0.32
USP42-201ENST00000306177 HHIPL2Q6UWX4 724 aa17.02■□□□□ 0.32
USP42-201ENST00000306177 PDS5AQ29RF7 1337 aaKnown RBP17.02■□□□□ 0.31
USP42-201ENST00000306177 NFRKBQ6P4R8 1299 aa17.02■□□□□ 0.31
USP42-201ENST00000306177 UBN1Q9NPG3 1134 aa17.02■□□□□ 0.31
USP42-201ENST00000306177 LIMA1Q9UHB6 759 aaKnown RBP17.02■□□□□ 0.31
USP42-201ENST00000306177 EMSYQ7Z589 1322 aa17.02■□□□□ 0.31
USP42-201ENST00000306177 TRIM49P0CI25 452 aa17.01■□□□□ 0.31
USP42-201ENST00000306177 TRIM49CP0CI26 452 aa17.01■□□□□ 0.31
USP42-201ENST00000306177 TRIM72Q6ZMU5 477 aa17.01■□□□□ 0.31
USP42-201ENST00000306177 GBP7Q8N8V2 638 aaPredicted RBP17.01■□□□□ 0.31
USP42-201ENST00000306177 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.01■□□□□ 0.31
USP42-201ENST00000306177 RBAKQ9NYW8 714 aaPredicted RBP17.01■□□□□ 0.31
USP42-201ENST00000306177 NYAP2Q9P242 653 aa17.01■□□□□ 0.31
USP42-201ENST00000306177 IP6K2Q9UHH9 426 aa17.01■□□□□ 0.31
USP42-201ENST00000306177 PFASO15067 1338 aa17.01■□□□□ 0.31
USP42-201ENST00000306177 WDR91A4D1P6 747 aa17.01■□□□□ 0.31
USP42-201ENST00000306177 NDUFB10O96000 172 aa17.01■□□□□ 0.31
USP42-201ENST00000306177 SDC4P31431 198 aa17.01■□□□□ 0.31
USP42-201ENST00000306177 SOX5P35711 763 aa17.01■□□□□ 0.31
USP42-201ENST00000306177 ZNF449Q6P9G9 518 aa17.01■□□□□ 0.31
USP42-201ENST00000306177 C16orf86Q6ZW13 317 aa17.01■□□□□ 0.31
USP42-201ENST00000306177 M0QYV0 167 aa17.01■□□□□ 0.31
USP42-201ENST00000306177 FAM133BQ5BKY9 247 aaKnown RBP17.01■□□□□ 0.31
USP42-201ENST00000306177 PDCD7Q8N8D1 485 aaKnown RBP17.01■□□□□ 0.31
USP42-201ENST00000306177 FBXL13Q8NEE6 735 aa17.01■□□□□ 0.31
USP42-201ENST00000306177 TIPINQ9BVW5 301 aa17.01■□□□□ 0.31
USP42-201ENST00000306177 RASA1P20936 1047 aa17.01■□□□□ 0.31
USP42-201ENST00000306177 HMGCS2P54868 508 aa17.01■□□□□ 0.31
USP42-201ENST00000306177 CC2D1AQ6P1N0 951 aaPredicted RBP17.01■□□□□ 0.31
USP42-201ENST00000306177 ACTR5Q9H9F9 607 aaPredicted RBP17.01■□□□□ 0.31
USP42-201ENST00000306177 AGO2Q9UKV8 859 aaKnown RBP17.01■□□□□ 0.31
USP42-201ENST00000306177 SLC16A3O15427 465 aaKnown RBP17■□□□□ 0.31
USP42-201ENST00000306177 ENTPD3O75355 529 aa17■□□□□ 0.31
USP42-201ENST00000306177 YWHABP31946 246 aaKnown RBP17■□□□□ 0.31
USP42-201ENST00000306177 COG7P83436 770 aa17■□□□□ 0.31
USP42-201ENST00000306177 ITSN1Q15811 1721 aa17■□□□□ 0.31
USP42-201ENST00000306177 KLC3Q6P597 504 aa17■□□□□ 0.31
USP42-201ENST00000306177 FNDC3AQ9Y2H6 1198 aaKnown RBP17■□□□□ 0.31
USP42-201ENST00000306177 NCK2O43639 380 aa17■□□□□ 0.31
USP42-201ENST00000306177 PMLP29590 882 aa17■□□□□ 0.31
USP42-201ENST00000306177 CHRNA3P32297 505 aa17■□□□□ 0.31
USP42-201ENST00000306177 VPS39Q96JC1 886 aa17■□□□□ 0.31
USP42-201ENST00000306177 JPH1Q9HDC5 661 aaPredicted RBP17■□□□□ 0.31
USP42-201ENST00000306177 KLHL8Q9P2G9 620 aaPredicted RBP17■□□□□ 0.31
USP42-201ENST00000306177 A0A087WUV0 522 aaPredicted RBP17■□□□□ 0.31
USP42-201ENST00000306177 CASP2P42575 452 aa17■□□□□ 0.31
USP42-201ENST00000306177 ZNF746Q6NUN9 644 aaPredicted RBP17■□□□□ 0.31
USP42-201ENST00000306177 TTC25Q96NG3 672 aa17■□□□□ 0.31
USP42-201ENST00000306177 GCNAQ96QF7 691 aa17■□□□□ 0.31
USP42-201ENST00000306177 WNT8AQ9H1J5 351 aa17■□□□□ 0.31
USP42-201ENST00000306177 CYP26B1Q9NR63 512 aa17■□□□□ 0.31
USP42-201ENST00000306177 USP27XA6NNY8 438 aa17■□□□□ 0.31
USP42-201ENST00000306177 KRT7P08729 469 aa17■□□□□ 0.31
USP42-201ENST00000306177 PSMC1P62191 440 aaKnown RBP17■□□□□ 0.31
USP42-201ENST00000306177 TSPY1Q01534 308 aa17■□□□□ 0.31
USP42-201ENST00000306177 DMTNQ08495 405 aa17■□□□□ 0.31
USP42-201ENST00000306177 NUGGCQ68CJ6 796 aa17■□□□□ 0.31
USP42-201ENST00000306177 GLYCTKQ8IVS8 523 aa17■□□□□ 0.31
USP42-201ENST00000306177 RFFLQ8WZ73 363 aa17■□□□□ 0.31
USP42-201ENST00000306177 TBX3O15119 743 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms