RNA–Protein interactions for RNA: ENST00000305409.2

SCG2-201, Transcript of secretogranin II, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG2, Length 2,576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-201ENST00000305409 PALMO75781 387 aa12.4□□□□□ -0.42
SCG2-201ENST00000305409 EIF3JO75822 258 aaKnown RBP12.4□□□□□ -0.42
SCG2-201ENST00000305409 CNMDO75829 334 aa12.4□□□□□ -0.42
SCG2-201ENST00000305409 CYP2C8P10632 490 aa12.4□□□□□ -0.42
SCG2-201ENST00000305409 UBA1P22314 1058 aaKnown RBP12.4□□□□□ -0.42
SCG2-201ENST00000305409 MARK3P27448 753 aa12.4□□□□□ -0.42
SCG2-201ENST00000305409 CNGA1P29973 690 aa12.4□□□□□ -0.42
SCG2-201ENST00000305409 NCKAP1LP55160 1127 aa12.4□□□□□ -0.42
SCG2-201ENST00000305409 JAM2P57087 298 aa12.4□□□□□ -0.42
SCG2-201ENST00000305409 DPY19L2Q6NUT2 758 aa12.4□□□□□ -0.42
SCG2-201ENST00000305409 SLC39A4Q6P5W5 647 aa12.4□□□□□ -0.42
SCG2-201ENST00000305409 ERO1BQ86YB8 467 aa12.4□□□□□ -0.42
SCG2-201ENST00000305409 RIOX2Q8IUF8 465 aa12.4□□□□□ -0.42
SCG2-201ENST00000305409 SMAP1Q8IYB5 467 aaPredicted RBP12.4□□□□□ -0.42
SCG2-201ENST00000305409 ANKRD13AQ8IZ07 590 aa12.4□□□□□ -0.42
SCG2-201ENST00000305409 MKNK1Q9BUB5 465 aa12.4□□□□□ -0.42
SCG2-201ENST00000305409 POLR3FQ9H1D9 316 aaPredicted RBP12.4□□□□□ -0.42
SCG2-201ENST00000305409 SUGCTQ9HAC7 445 aa12.4□□□□□ -0.42
SCG2-201ENST00000305409 ACP6Q9NPH0 428 aa12.4□□□□□ -0.42
SCG2-201ENST00000305409 PRDM10Q9NQV6 1147 aa12.4□□□□□ -0.42
SCG2-201ENST00000305409 SEPT11Q9NVA2 429 aaKnown RBP12.4□□□□□ -0.42
SCG2-201ENST00000305409 SUPT20HL2P0C7V6 817 aa12.39□□□□□ -0.43
SCG2-201ENST00000305409 SMTNP53814 917 aa12.39□□□□□ -0.43
SCG2-201ENST00000305409 MAP2K1Q02750 393 aaPredicted RBP12.39□□□□□ -0.43
SCG2-201ENST00000305409 C2orf54Q08AI8 447 aa12.39□□□□□ -0.43
SCG2-201ENST00000305409 NFIL3Q16649 462 aa12.39□□□□□ -0.43
SCG2-201ENST00000305409 LMBRD2Q68DH5 695 aaPredicted RBP12.39□□□□□ -0.43
SCG2-201ENST00000305409 MIS18BP1Q6P0N0 1132 aa12.39□□□□□ -0.43
SCG2-201ENST00000305409 TRIM50Q86XT4 487 aa12.39□□□□□ -0.43
SCG2-201ENST00000305409 GLYCTKQ8IVS8 523 aa12.39□□□□□ -0.43
SCG2-201ENST00000305409 ARHGEF19Q8IW93 802 aa12.39□□□□□ -0.43
SCG2-201ENST00000305409 TRIM58Q8NG06 486 aa12.39□□□□□ -0.43
SCG2-201ENST00000305409 GOLGA5Q8TBA6 731 aa12.39□□□□□ -0.43
SCG2-201ENST00000305409 U2AF1L4Q8WU68 220 aaKnown RBP12.39□□□□□ -0.43
SCG2-201ENST00000305409 MS4A14Q96JA4 679 aa12.39□□□□□ -0.43
SCG2-201ENST00000305409 ZNF668Q96K58 619 aaPredicted RBP12.39□□□□□ -0.43
SCG2-201ENST00000305409 SENP7Q9BQF6 1050 aa12.39□□□□□ -0.43
SCG2-201ENST00000305409 PLEKHA4Q9H4M7 779 aa12.39□□□□□ -0.43
SCG2-201ENST00000305409 UBE2TQ9NPD8 197 aaPredicted RBP12.39□□□□□ -0.43
SCG2-201ENST00000305409 ZNF302Q9NR11 478 aa12.39□□□□□ -0.43
SCG2-201ENST00000305409 DDX41Q9UJV9 622 aaKnown RBP12.39□□□□□ -0.43
SCG2-201ENST00000305409 F8VZ95 297 aa12.39□□□□□ -0.43
SCG2-201ENST00000305409 FOXN3O00409 490 aaPredicted RBP12.39□□□□□ -0.43
SCG2-201ENST00000305409 ARIH2O95376 493 aa12.39□□□□□ -0.43
SCG2-201ENST00000305409 DLATP10515 647 aaKnown RBP12.39□□□□□ -0.43
SCG2-201ENST00000305409 GJA5P36382 358 aa12.39□□□□□ -0.43
SCG2-201ENST00000305409 USP8P40818 1118 aa12.39□□□□□ -0.43
SCG2-201ENST00000305409 PPATQ06203 517 aa12.39□□□□□ -0.43
SCG2-201ENST00000305409 ALKBH5Q6P6C2 394 aaKnown RBP12.39□□□□□ -0.43
SCG2-201ENST00000305409 TMCO3Q6UWJ1 677 aa12.39□□□□□ -0.43
SCG2-201ENST00000305409 ZBTB10Q96DT7 871 aa12.39□□□□□ -0.43
SCG2-201ENST00000305409 BICD1Q96G01 975 aa12.39□□□□□ -0.43
SCG2-201ENST00000305409 GPR88Q9GZN0 384 aa12.39□□□□□ -0.43
SCG2-201ENST00000305409 RBPJLQ9UBG7 517 aa12.39□□□□□ -0.43
SCG2-201ENST00000305409 CLEC11AQ9Y240 323 aa12.39□□□□□ -0.43
SCG2-201ENST00000305409 SYNGAP1Q96PV0 1343 aa12.39□□□□□ -0.43
SCG2-201ENST00000305409 DDX3XO00571 662 aaKnown RBP eCLIP12.38□□□□□ -0.43
SCG2-201ENST00000305409 NOP2P46087 812 aaKnown RBP12.38□□□□□ -0.43
SCG2-201ENST00000305409 POLGP54098 1239 aaPredicted RBP12.38□□□□□ -0.43
SCG2-201ENST00000305409 DRP2Q13474 957 aa12.38□□□□□ -0.43
SCG2-201ENST00000305409 SNRNP35Q16560 246 aaKnown RBP12.38□□□□□ -0.43
SCG2-201ENST00000305409 TAS1R3Q7RTX0 852 aa12.38□□□□□ -0.43
SCG2-201ENST00000305409 PALB2Q86YC2 1186 aa12.38□□□□□ -0.43
SCG2-201ENST00000305409 SLC9A9Q8IVB4 645 aa12.38□□□□□ -0.43
SCG2-201ENST00000305409 LMO3Q8TAP4 145 aa12.38□□□□□ -0.43
SCG2-201ENST00000305409 POMGNT1Q8WZA1 660 aa12.38□□□□□ -0.43
SCG2-201ENST00000305409 COPS5Q92905 334 aa12.38□□□□□ -0.43
SCG2-201ENST00000305409 CDHR1Q96JP9 859 aa12.38□□□□□ -0.43
SCG2-201ENST00000305409 NOX5Q96PH1 765 aa12.38□□□□□ -0.43
SCG2-201ENST00000305409 PCYT2Q99447 389 aa12.38□□□□□ -0.43
SCG2-201ENST00000305409 NAGPAQ9UK23 515 aa12.38□□□□□ -0.43
SCG2-201ENST00000305409 JRKLQ9Y4A0 524 aa12.38□□□□□ -0.43
SCG2-201ENST00000305409 HNRNPDLO14979 420 aaKnown RBP12.38□□□□□ -0.43
SCG2-201ENST00000305409 PJA2O43164 708 aa12.38□□□□□ -0.43
SCG2-201ENST00000305409 SASH3O75995 380 aa12.38□□□□□ -0.43
SCG2-201ENST00000305409 NF2P35240 595 aa12.38□□□□□ -0.43
SCG2-201ENST00000305409 SOX5P35711 763 aa12.38□□□□□ -0.43
SCG2-201ENST00000305409 STAT1P42224 750 aa12.38□□□□□ -0.43
SCG2-201ENST00000305409 VSNL1P62760 191 aa12.38□□□□□ -0.43
SCG2-201ENST00000305409 PPP2R5AQ15172 486 aa12.38□□□□□ -0.43
SCG2-201ENST00000305409 MAP1SQ66K74 1059 aaPredicted RBP12.38□□□□□ -0.43
SCG2-201ENST00000305409 DNERQ8NFT8 737 aa12.38□□□□□ -0.43
SCG2-201ENST00000305409 LNX1Q8TBB1 728 aaPredicted RBP12.38□□□□□ -0.43
SCG2-201ENST00000305409 ALS2CR12Q96Q35 445 aa12.38□□□□□ -0.43
SCG2-201ENST00000305409 IWS1Q96ST2 819 aa12.38□□□□□ -0.43
SCG2-201ENST00000305409 TLR10Q9BXR5 811 aa12.38□□□□□ -0.43
SCG2-201ENST00000305409 TMEM117Q9H0C3 514 aa12.38□□□□□ -0.43
SCG2-201ENST00000305409 TAS2R14Q9NYV8 317 aa12.38□□□□□ -0.43
SCG2-201ENST00000305409 APEX2Q9UBZ4 518 aa12.38□□□□□ -0.43
SCG2-201ENST00000305409 CHORDC1Q9UHD1 332 aaPredicted RBP12.38□□□□□ -0.43
SCG2-201ENST00000305409 SNX12Q9UMY4 172 aa12.38□□□□□ -0.43
SCG2-201ENST00000305409 MYPNQ86TC9 1320 aa12.38□□□□□ -0.43
SCG2-201ENST00000305409 GSTTP1A0A1W2PQM5 241 aa12.37□□□□□ -0.43
SCG2-201ENST00000305409 GTPBP10A4D1E9 387 aaKnown RBP12.37□□□□□ -0.43
SCG2-201ENST00000305409 SPDYE5A6NIY4 337 aa12.37□□□□□ -0.43
SCG2-201ENST00000305409 NFASCO94856 1347 aa12.37□□□□□ -0.43
SCG2-201ENST00000305409 GGPS1O95749 300 aa12.37□□□□□ -0.43
SCG2-201ENST00000305409 CALCAP01258 141 aa12.37□□□□□ -0.43
SCG2-201ENST00000305409 MAPTP10636 758 aaKnown RBP12.37□□□□□ -0.43
SCG2-201ENST00000305409 ABCB4P21439 1286 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms