RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 TOB2Q14106 344 aaPredicted RBP8.12□□□□□ -1.11
SF3B3-201ENST00000302516 SPATA21Q7Z572 469 aa8.12□□□□□ -1.11
SF3B3-201ENST00000302516 RHOT1Q8IXI2 618 aa8.12□□□□□ -1.11
SF3B3-201ENST00000302516 ZNF555Q8NEP9 628 aa8.12□□□□□ -1.11
SF3B3-201ENST00000302516 ADAMTS1Q9UHI8 967 aa8.12□□□□□ -1.11
SF3B3-201ENST00000302516 MDH1P40925 334 aaKnown RBP8.12□□□□□ -1.11
SF3B3-201ENST00000302516 HIF1AQ16665 826 aa8.12□□□□□ -1.11
SF3B3-201ENST00000302516 KIAA1755Q5JYT7 1200 aa8.12□□□□□ -1.11
SF3B3-201ENST00000302516 NFRKBQ6P4R8 1299 aa8.12□□□□□ -1.11
SF3B3-201ENST00000302516 ANKRD7Q92527 254 aa8.12□□□□□ -1.11
SF3B3-201ENST00000302516 DNAJC12Q9UKB3 198 aa8.12□□□□□ -1.11
SF3B3-201ENST00000302516 GFPT1Q06210 699 aaPredicted RBP8.12□□□□□ -1.11
SF3B3-201ENST00000302516 ADCY1Q08828 1119 aa8.12□□□□□ -1.11
SF3B3-201ENST00000302516 SLC30A9Q6PML9 568 aa8.12□□□□□ -1.11
SF3B3-201ENST00000302516 RNF139Q8WU17 664 aa8.12□□□□□ -1.11
SF3B3-201ENST00000302516 FAM161BQ96MY7 647 aa8.12□□□□□ -1.11
SF3B3-201ENST00000302516 PIGSQ96S52 555 aa8.12□□□□□ -1.11
SF3B3-201ENST00000302516 COG4Q9H9E3 785 aa8.12□□□□□ -1.11
SF3B3-201ENST00000302516 PDP2Q9P2J9 529 aa8.12□□□□□ -1.11
SF3B3-201ENST00000302516 PALLDQ8WX93 1383 aa8.12□□□□□ -1.11
SF3B3-201ENST00000302516 DIAPH2O60879 1101 aa8.12□□□□□ -1.11
SF3B3-201ENST00000302516 NPR1P16066 1061 aa8.12□□□□□ -1.11
SF3B3-201ENST00000302516 SCP2P22307 547 aa8.12□□□□□ -1.11
SF3B3-201ENST00000302516 SFNP31947 248 aa8.12□□□□□ -1.11
SF3B3-201ENST00000302516 SOX5P35711 763 aa8.12□□□□□ -1.11
SF3B3-201ENST00000302516 KRR1Q13601 381 aaKnown RBP8.12□□□□□ -1.11
SF3B3-201ENST00000302516 TSGA10IPQ3SY00 556 aa8.12□□□□□ -1.11
SF3B3-201ENST00000302516 NUDCD3Q8IVD9 361 aa8.12□□□□□ -1.11
SF3B3-201ENST00000302516 HEG1Q9ULI3 1381 aa8.11□□□□□ -1.11
SF3B3-201ENST00000302516 H0Y3Z8 333 aa8.11□□□□□ -1.11
SF3B3-201ENST00000302516 CLIC2O15247 247 aa8.11□□□□□ -1.11
SF3B3-201ENST00000302516 ALX1Q15699 326 aa8.11□□□□□ -1.11
SF3B3-201ENST00000302516 ELMSAN1Q6PJG2 1045 aa8.11□□□□□ -1.11
SF3B3-201ENST00000302516 HSPH1Q92598 858 aa8.11□□□□□ -1.11
SF3B3-201ENST00000302516 KCND2Q9NZV8 630 aa8.11□□□□□ -1.11
SF3B3-201ENST00000302516 USP15Q9Y4E8 981 aaPredicted RBP8.11□□□□□ -1.11
SF3B3-201ENST00000302516 GOLGA8IPA6NC78 632 aa8.11□□□□□ -1.11
SF3B3-201ENST00000302516 PRELPP51888 382 aa8.11□□□□□ -1.11
SF3B3-201ENST00000302516 GPS1Q13098 491 aa8.11□□□□□ -1.11
SF3B3-201ENST00000302516 KNOP1Q1ED39 458 aaKnown RBP8.11□□□□□ -1.11
SF3B3-201ENST00000302516 C4orf50Q6ZRC1 276 aa8.11□□□□□ -1.11
SF3B3-201ENST00000302516 RASGRP2Q7LDG7 609 aa8.11□□□□□ -1.11
SF3B3-201ENST00000302516 GUF1Q8N442 669 aaKnown RBP8.11□□□□□ -1.11
SF3B3-201ENST00000302516 KDM4CQ9H3R0 1056 aa8.11□□□□□ -1.11
SF3B3-201ENST00000302516 NSMCE4AQ9NXX6 385 aa8.11□□□□□ -1.11
SF3B3-201ENST00000302516 TULP4Q9NRJ4 1543 aa8.11□□□□□ -1.11
SF3B3-201ENST00000302516 INO80Q9ULG1 1556 aaPredicted RBP8.11□□□□□ -1.11
SF3B3-201ENST00000302516 SLC12A1Q13621 1099 aa8.11□□□□□ -1.11
SF3B3-201ENST00000302516 FAM83BQ5T0W9 1011 aa8.11□□□□□ -1.11
SF3B3-201ENST00000302516 CCDC137Q6PK04 289 aaKnown RBP8.11□□□□□ -1.11
SF3B3-201ENST00000302516 FAM149B1Q96BN6 582 aa8.11□□□□□ -1.11
SF3B3-201ENST00000302516 FAM20AQ96MK3 541 aa8.11□□□□□ -1.11
SF3B3-201ENST00000302516 CNOT8Q9UFF9 292 aaKnown RBP8.11□□□□□ -1.11
SF3B3-201ENST00000302516 SPDYE2BA6NHP3 402 aa8.11□□□□□ -1.11
SF3B3-201ENST00000302516 ZBTB5O15062 677 aa8.11□□□□□ -1.11
SF3B3-201ENST00000302516 SPDYE6P0CI01 402 aa8.11□□□□□ -1.11
SF3B3-201ENST00000302516 ZNF699Q32M78 642 aa8.11□□□□□ -1.11
SF3B3-201ENST00000302516 SETD3Q86TU7 594 aaPredicted RBP8.11□□□□□ -1.11
SF3B3-201ENST00000302516 FTOQ9C0B1 505 aaKnown RBP eCLIP8.11□□□□□ -1.11
SF3B3-201ENST00000302516 PI4KBQ9UBF8 816 aa8.11□□□□□ -1.11
SF3B3-201ENST00000302516 A0A1B0GTH6 734 aa8.11□□□□□ -1.11
SF3B3-201ENST00000302516 H2AFYO75367 372 aaKnown RBP8.11□□□□□ -1.11
SF3B3-201ENST00000302516 PPP1R37O75864 691 aa8.11□□□□□ -1.11
SF3B3-201ENST00000302516 GRIN1Q05586 938 aa8.11□□□□□ -1.11
SF3B3-201ENST00000302516 LRRC41Q15345 812 aa8.11□□□□□ -1.11
SF3B3-201ENST00000302516 MYLK4Q86YV6 388 aaPredicted RBP8.11□□□□□ -1.11
SF3B3-201ENST00000302516 LCORLQ8N3X6 602 aa8.11□□□□□ -1.11
SF3B3-201ENST00000302516 PGBD1Q96JS3 809 aa8.11□□□□□ -1.11
SF3B3-201ENST00000302516 HPCAL4Q9UM19 191 aa8.11□□□□□ -1.11
SF3B3-201ENST00000302516 RSPH10B2B2RC85 870 aa8.11□□□□□ -1.11
SF3B3-201ENST00000302516 PHF2O75151 1096 aa8.11□□□□□ -1.11
SF3B3-201ENST00000302516 RSPH10BP0C881 870 aa8.11□□□□□ -1.11
SF3B3-201ENST00000302516 S100A5P33763 92 aa8.11□□□□□ -1.11
SF3B3-201ENST00000302516 KIF22Q14807 665 aa8.11□□□□□ -1.11
SF3B3-201ENST00000302516 FAM47CQ5HY64 1035 aa8.11□□□□□ -1.11
SF3B3-201ENST00000302516 ZNF667Q5HYK9 610 aa8.11□□□□□ -1.11
SF3B3-201ENST00000302516 PRUNE1Q86TP1 453 aa8.11□□□□□ -1.11
SF3B3-201ENST00000302516 TAB3Q8N5C8 712 aaPredicted RBP8.11□□□□□ -1.11
SF3B3-201ENST00000302516 YIPF3Q9GZM5 350 aa8.11□□□□□ -1.11
SF3B3-201ENST00000302516 C10orf88Q9H8K7 445 aa8.11□□□□□ -1.11
SF3B3-201ENST00000302516 ZWILCHQ9H900 591 aa8.11□□□□□ -1.11
SF3B3-201ENST00000302516 TLR7Q9NYK1 1049 aaKnown RBP8.11□□□□□ -1.11
SF3B3-201ENST00000302516 RNF103-CHMP3A0A140T963 221 aa8.11□□□□□ -1.11
SF3B3-201ENST00000302516 MEIS1O00470 390 aa8.11□□□□□ -1.11
SF3B3-201ENST00000302516 OSBPP22059 807 aa8.11□□□□□ -1.11
SF3B3-201ENST00000302516 KPNB1Q14974 876 aaKnown RBP8.11□□□□□ -1.11
SF3B3-201ENST00000302516 AASDHQ4L235 1098 aaPredicted RBP8.11□□□□□ -1.11
SF3B3-201ENST00000302516 PARVAQ9NVD7 372 aa8.11□□□□□ -1.11
SF3B3-201ENST00000302516 SNX12Q9UMY4 172 aa8.11□□□□□ -1.11
SF3B3-201ENST00000302516 MYH6P13533 1939 aa8.11□□□□□ -1.11
SF3B3-201ENST00000302516 UBAP1LF5GYI3 381 aa8.1□□□□□ -1.11
SF3B3-201ENST00000302516 INO80B-WBP1J3KQ70 363 aa8.1□□□□□ -1.11
SF3B3-201ENST00000302516 SNX19Q92543 992 aa8.1□□□□□ -1.11
SF3B3-201ENST00000302516 SEPT8Q92599 483 aa8.1□□□□□ -1.11
SF3B3-201ENST00000302516 INO80BQ9C086 356 aaPredicted RBP8.1□□□□□ -1.11
SF3B3-201ENST00000302516 EHD2Q9NZN4 543 aa8.1□□□□□ -1.11
SF3B3-201ENST00000302516 PSMC3IPQ9P2W1 217 aaPredicted RBP8.1□□□□□ -1.11
SF3B3-201ENST00000302516 STAP1Q9ULZ2 295 aa8.1□□□□□ -1.11
SF3B3-201ENST00000302516 TBC1D4O60343 1298 aa8.1□□□□□ -1.11
SF3B3-201ENST00000302516 CDH16O75309 829 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms