RNA–Protein interactions for RNA: ENST00000301732.9

ABCA3-201, Transcript of ATP binding cassette subfamily A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA3, Length 6,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-201ENST00000301732 LRFN2Q9ULH4 789 aa13.15□□□□□ -0.3
ABCA3-201ENST00000301732 GRIN2AQ12879 1464 aa13.15□□□□□ -0.3
ABCA3-201ENST00000301732 TYW5A2RUC4 315 aaKnown RBP13.15□□□□□ -0.3
ABCA3-201ENST00000301732 USP17L5A8MUK1 530 aa13.15□□□□□ -0.3
ABCA3-201ENST00000301732 TAS2R42Q7RTR8 314 aa13.15□□□□□ -0.3
ABCA3-201ENST00000301732 DHX40Q8IX18 779 aaKnown RBP13.15□□□□□ -0.3
ABCA3-201ENST00000301732 CNBD2Q96M20 576 aa13.15□□□□□ -0.3
ABCA3-201ENST00000301732 CHP1Q99653 195 aa13.15□□□□□ -0.3
ABCA3-201ENST00000301732 THAP9Q9H5L6 903 aa13.15□□□□□ -0.3
ABCA3-201ENST00000301732 SCAF8Q9UPN6 1271 aaKnown RBP13.15□□□□□ -0.3
ABCA3-201ENST00000301732 H0YC42 278 aa13.14□□□□□ -0.31
ABCA3-201ENST00000301732 PRPF4O43172 522 aaKnown RBP eCLIP13.14□□□□□ -0.31
ABCA3-201ENST00000301732 METTL23Q86XA0 190 aa13.14□□□□□ -0.31
ABCA3-201ENST00000301732 RHPN2Q8IUC4 686 aa13.14□□□□□ -0.31
ABCA3-201ENST00000301732 SIRT2Q8IXJ6 389 aa13.14□□□□□ -0.31
ABCA3-201ENST00000301732 MDM1Q8TC05 714 aa13.14□□□□□ -0.31
ABCA3-201ENST00000301732 RPF1Q9H9Y2 349 aaKnown RBP13.14□□□□□ -0.31
ABCA3-201ENST00000301732 CAPN10Q9HC96 672 aa13.14□□□□□ -0.31
ABCA3-201ENST00000301732 EHD2Q9NZN4 543 aa13.14□□□□□ -0.31
ABCA3-201ENST00000301732 RCOR1Q9UKL0 485 aa13.14□□□□□ -0.31
ABCA3-201ENST00000301732 ATP8B1O43520 1251 aa13.14□□□□□ -0.31
ABCA3-201ENST00000301732 DAB1O75553 588 aa13.14□□□□□ -0.31
ABCA3-201ENST00000301732 TJP3O95049 919 aa13.14□□□□□ -0.31
ABCA3-201ENST00000301732 LCP1P13796 627 aa13.14□□□□□ -0.31
ABCA3-201ENST00000301732 KLK7P49862 253 aa13.14□□□□□ -0.31
ABCA3-201ENST00000301732 CCDC137Q6PK04 289 aaKnown RBP13.14□□□□□ -0.31
ABCA3-201ENST00000301732 CCDC81Q6ZN84 652 aa13.14□□□□□ -0.31
ABCA3-201ENST00000301732 DDX42Q86XP3 938 aaKnown RBP eCLIP13.14□□□□□ -0.31
ABCA3-201ENST00000301732 GLYCTKQ8IVS8 523 aa13.14□□□□□ -0.31
ABCA3-201ENST00000301732 UGGT2Q9NYU1 1516 aa13.14□□□□□ -0.31
ABCA3-201ENST00000301732 ARL4CP56559 192 aa13.14□□□□□ -0.31
ABCA3-201ENST00000301732 MCF2L2Q86YR7 1114 aa13.14□□□□□ -0.31
ABCA3-201ENST00000301732 ZNF564Q8TBZ8 553 aaPredicted RBP13.14□□□□□ -0.31
ABCA3-201ENST00000301732 ULK4Q96C45 1275 aa13.14□□□□□ -0.31
ABCA3-201ENST00000301732 THAP11Q96EK4 314 aa13.14□□□□□ -0.31
ABCA3-201ENST00000301732 IFT43Q96FT9 208 aa13.14□□□□□ -0.31
ABCA3-201ENST00000301732 TTI1O43156 1089 aa13.14□□□□□ -0.31
ABCA3-201ENST00000301732 AKAP10O43572 662 aa13.14□□□□□ -0.31
ABCA3-201ENST00000301732 CHN1P15882 459 aa13.14□□□□□ -0.31
ABCA3-201ENST00000301732 KCNA2P16389 499 aa13.14□□□□□ -0.31
ABCA3-201ENST00000301732 AARSP49588 968 aaKnown RBP eCLIP13.14□□□□□ -0.31
ABCA3-201ENST00000301732 CNGA3Q16281 694 aa13.14□□□□□ -0.31
ABCA3-201ENST00000301732 MIER2Q8N344 545 aa13.14□□□□□ -0.31
ABCA3-201ENST00000301732 BBS5Q8N3I7 341 aa13.14□□□□□ -0.31
ABCA3-201ENST00000301732 THTPAQ9BU02 230 aa13.14□□□□□ -0.31
ABCA3-201ENST00000301732 LOC100653049A0A140TA62 436 aa13.14□□□□□ -0.31
ABCA3-201ENST00000301732 TTC26A0AVF1 554 aa13.14□□□□□ -0.31
ABCA3-201ENST00000301732 E5RI56 91 aa13.14□□□□□ -0.31
ABCA3-201ENST00000301732 AIM2O14862 343 aa13.14□□□□□ -0.31
ABCA3-201ENST00000301732 KRT34O76011 436 aa13.14□□□□□ -0.31
ABCA3-201ENST00000301732 LMNAP02545 664 aaKnown RBP13.14□□□□□ -0.31
ABCA3-201ENST00000301732 KCNH2Q12809 1159 aa13.14□□□□□ -0.31
ABCA3-201ENST00000301732 DEPDC1Q5TB30 811 aa13.14□□□□□ -0.31
ABCA3-201ENST00000301732 SRLQ86TD4 932 aa13.14□□□□□ -0.31
ABCA3-201ENST00000301732 AFG1LQ8WV93 481 aa13.14□□□□□ -0.31
ABCA3-201ENST00000301732 PNMA2Q9UL42 364 aa13.14□□□□□ -0.31
ABCA3-201ENST00000301732 ATMINO43313 823 aaPredicted RBP13.13□□□□□ -0.31
ABCA3-201ENST00000301732 KCNA4P22459 653 aa13.13□□□□□ -0.31
ABCA3-201ENST00000301732 ADD2P35612 726 aa13.13□□□□□ -0.31
ABCA3-201ENST00000301732 GPR162Q16538 588 aa13.13□□□□□ -0.31
ABCA3-201ENST00000301732 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.13□□□□□ -0.31
ABCA3-201ENST00000301732 ADGRA2Q96PE1 1338 aa13.13□□□□□ -0.31
ABCA3-201ENST00000301732 K7ERI5 159 aa13.13□□□□□ -0.31
ABCA3-201ENST00000301732 KRT37O76014 449 aa13.13□□□□□ -0.31
ABCA3-201ENST00000301732 KCTD19Q17RG1 926 aaPredicted RBP13.13□□□□□ -0.31
ABCA3-201ENST00000301732 CCDC142Q17RM4 750 aa13.13□□□□□ -0.31
ABCA3-201ENST00000301732 PDXDC1Q6P996 788 aa13.13□□□□□ -0.31
ABCA3-201ENST00000301732 ADCK1Q86TW2 530 aa13.13□□□□□ -0.31
ABCA3-201ENST00000301732 ZBTB18Q99592 522 aa13.13□□□□□ -0.31
ABCA3-201ENST00000301732 GOLGA8QA0A0J9YX86 632 aa13.13□□□□□ -0.31
ABCA3-201ENST00000301732 FAM95CA0A1B0GW59 222 aa13.13□□□□□ -0.31
ABCA3-201ENST00000301732 GOLGA8OA6NCC3 632 aa13.13□□□□□ -0.31
ABCA3-201ENST00000301732 GOLGA8NF8WBI6 632 aa13.13□□□□□ -0.31
ABCA3-201ENST00000301732 M0QYV0 167 aa13.13□□□□□ -0.31
ABCA3-201ENST00000301732 TPST1O60507 370 aa13.13□□□□□ -0.31
ABCA3-201ENST00000301732 MAP4P27816 1152 aaKnown RBP13.13□□□□□ -0.31
ABCA3-201ENST00000301732 SMIM5Q71RC9 77 aa13.13□□□□□ -0.31
ABCA3-201ENST00000301732 ARMC2Q8NEN0 867 aa13.13□□□□□ -0.31
ABCA3-201ENST00000301732 KCNA3P22001 575 aa13.13□□□□□ -0.31
ABCA3-201ENST00000301732 CUL1Q13616 776 aa13.13□□□□□ -0.31
ABCA3-201ENST00000301732 TFDP1Q14186 410 aa13.13□□□□□ -0.31
ABCA3-201ENST00000301732 ANKRD40Q6AI12 368 aa13.13□□□□□ -0.31
ABCA3-201ENST00000301732 USP6NLQ92738 828 aa13.13□□□□□ -0.31
ABCA3-201ENST00000301732 ZBTB10Q96DT7 871 aa13.13□□□□□ -0.31
ABCA3-201ENST00000301732 NACC1Q96RE7 527 aa13.13□□□□□ -0.31
ABCA3-201ENST00000301732 TRIM15Q9C019 465 aa13.13□□□□□ -0.31
ABCA3-201ENST00000301732 KCNF1Q9H3M0 494 aa13.13□□□□□ -0.31
ABCA3-201ENST00000301732 AS3MTQ9HBK9 375 aa13.13□□□□□ -0.31
ABCA3-201ENST00000301732 ATP11BQ9Y2G3 1177 aa13.13□□□□□ -0.31
ABCA3-201ENST00000301732 GRAP2O75791 330 aa13.13□□□□□ -0.31
ABCA3-201ENST00000301732 TAC1P20366 129 aa13.13□□□□□ -0.31
ABCA3-201ENST00000301732 CSE1LP55060 971 aaKnown RBP13.13□□□□□ -0.31
ABCA3-201ENST00000301732 KCTD2Q14681 263 aa13.13□□□□□ -0.31
ABCA3-201ENST00000301732 CEP55Q53EZ4 464 aa13.13□□□□□ -0.31
ABCA3-201ENST00000301732 C9orf72Q96LT7 481 aa13.13□□□□□ -0.31
ABCA3-201ENST00000301732 STOML1Q9UBI4 398 aa13.13□□□□□ -0.31
ABCA3-201ENST00000301732 STK17AQ9UEE5 414 aa13.13□□□□□ -0.31
ABCA3-201ENST00000301732 PNMA8BQ9ULN7 279 aaPredicted RBP13.13□□□□□ -0.31
ABCA3-201ENST00000301732 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.13□□□□□ -0.31
ABCA3-201ENST00000301732 KIZQ2M2Z5 673 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms