RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 KYNUQ16719 465 aa15.79■□□□□ 0.12
COL6A2-201ENST00000300527 MAB21L3Q8N8X9 362 aa15.79■□□□□ 0.12
COL6A2-201ENST00000300527 PRELID2Q8N945 189 aa15.79■□□□□ 0.12
COL6A2-201ENST00000300527 PPP1R12CQ9BZL4 782 aa15.79■□□□□ 0.12
COL6A2-201ENST00000300527 GRHL1Q9NZI5 618 aa15.79■□□□□ 0.12
COL6A2-201ENST00000300527 DNM3Q9UQ16 869 aa15.79■□□□□ 0.12
COL6A2-201ENST00000300527 A0A1W2PRG0 241 aa15.79■□□□□ 0.12
COL6A2-201ENST00000300527 SMIM24O75264 130 aa15.79■□□□□ 0.12
COL6A2-201ENST00000300527 SOX5P35711 763 aa15.79■□□□□ 0.12
COL6A2-201ENST00000300527 MXRA7P84157 204 aa15.79■□□□□ 0.12
COL6A2-201ENST00000300527 IKQ13123 557 aaPredicted RBP15.79■□□□□ 0.12
COL6A2-201ENST00000300527 COL23A1Q86Y22 540 aaPredicted RBP15.79■□□□□ 0.12
COL6A2-201ENST00000300527 UBL4BQ8N7F7 174 aa15.79■□□□□ 0.12
COL6A2-201ENST00000300527 FBF1Q8TES7 1133 aa15.79■□□□□ 0.12
COL6A2-201ENST00000300527 SLC35C1Q96A29 364 aa15.79■□□□□ 0.12
COL6A2-201ENST00000300527 TRIM7Q9C029 511 aa15.79■□□□□ 0.12
COL6A2-201ENST00000300527 FAM187AA6NFU0 413 aa15.78■□□□□ 0.12
COL6A2-201ENST00000300527 SPAG7O75391 227 aa15.78■□□□□ 0.12
COL6A2-201ENST00000300527 LMNB1P20700 586 aa15.78■□□□□ 0.12
COL6A2-201ENST00000300527 RPL13P26373 211 aaKnown RBP15.78■□□□□ 0.12
COL6A2-201ENST00000300527 FRMD5Q7Z6J6 570 aa15.78■□□□□ 0.12
COL6A2-201ENST00000300527 SLFN11Q7Z7L1 901 aa15.78■□□□□ 0.12
COL6A2-201ENST00000300527 NBPF5PQ86XG9 351 aaPredicted RBP15.78■□□□□ 0.12
COL6A2-201ENST00000300527 MYCT1Q8N699 235 aa15.78■□□□□ 0.12
COL6A2-201ENST00000300527 RUSC1Q9BVN2 902 aa15.78■□□□□ 0.12
COL6A2-201ENST00000300527 CDC42EP4Q9H3Q1 356 aaKnown RBP15.78■□□□□ 0.12
COL6A2-201ENST00000300527 NKX1-2Q9UD57 310 aaPredicted RBP15.78■□□□□ 0.12
COL6A2-201ENST00000300527 ZMYND8Q9ULU4 1186 aaPredicted RBP15.78■□□□□ 0.12
COL6A2-201ENST00000300527 ARL2BPQ9Y2Y0 163 aa15.78■□□□□ 0.12
COL6A2-201ENST00000300527 BCORQ6W2J9 1755 aa15.78■□□□□ 0.12
COL6A2-201ENST00000300527 PFASO15067 1338 aa15.78■□□□□ 0.12
COL6A2-201ENST00000300527 KDM3AQ9Y4C1 1321 aa15.78■□□□□ 0.12
COL6A2-201ENST00000300527 BTNL10A8MVZ5 291 aa15.78■□□□□ 0.12
COL6A2-201ENST00000300527 GJC1P36383 396 aa15.78■□□□□ 0.12
COL6A2-201ENST00000300527 ACP6Q9NPH0 428 aa15.78■□□□□ 0.12
COL6A2-201ENST00000300527 SLC5A4Q9NY91 659 aa15.78■□□□□ 0.12
COL6A2-201ENST00000300527 NKIRAS1Q9NYS0 192 aa15.78■□□□□ 0.12
COL6A2-201ENST00000300527 PCDHA2Q9Y5H9 948 aa15.78■□□□□ 0.12
COL6A2-201ENST00000300527 PHF2O75151 1096 aa15.78■□□□□ 0.12
COL6A2-201ENST00000300527 FTLP02792 175 aaPredicted RBP15.78■□□□□ 0.12
COL6A2-201ENST00000300527 CTCFP49711 727 aaPredicted RBP15.78■□□□□ 0.12
COL6A2-201ENST00000300527 CYP4F22Q6NT55 531 aa15.78■□□□□ 0.12
COL6A2-201ENST00000300527 ARHGAP27Q6ZUM4 889 aa15.78■□□□□ 0.12
COL6A2-201ENST00000300527 ADGRF4Q8IZF3 695 aa15.78■□□□□ 0.12
COL6A2-201ENST00000300527 ELMO3Q96BJ8 720 aa15.78■□□□□ 0.12
COL6A2-201ENST00000300527 ERP27Q96DN0 273 aa15.78■□□□□ 0.12
COL6A2-201ENST00000300527 MXD3Q9BW11 206 aa15.78■□□□□ 0.12
COL6A2-201ENST00000300527 SIX2Q9NPC8 291 aa15.78■□□□□ 0.12
COL6A2-201ENST00000300527 HAO1Q9UJM8 370 aa15.78■□□□□ 0.12
COL6A2-201ENST00000300527 THAP12O43422 761 aa15.77■□□□□ 0.12
COL6A2-201ENST00000300527 ZBTB48P10074 688 aaPredicted RBP15.77■□□□□ 0.12
COL6A2-201ENST00000300527 COMTP21964 271 aa15.77■□□□□ 0.12
COL6A2-201ENST00000300527 GRIPAP1Q4V328 841 aa15.77■□□□□ 0.12
COL6A2-201ENST00000300527 MIS18BP1Q6P0N0 1132 aa15.77■□□□□ 0.12
COL6A2-201ENST00000300527 PRUNE1Q86TP1 453 aa15.77■□□□□ 0.12
COL6A2-201ENST00000300527 KIAA0825Q8IV33 1275 aa15.77■□□□□ 0.12
COL6A2-201ENST00000300527 NEDD1Q8NHV4 660 aa15.77■□□□□ 0.12
COL6A2-201ENST00000300527 ATG4AQ8WYN0 398 aa15.77■□□□□ 0.12
COL6A2-201ENST00000300527 TXLNGYQ9BZA5 131 aa15.77■□□□□ 0.12
COL6A2-201ENST00000300527 CARD9Q9H257 536 aa15.77■□□□□ 0.12
COL6A2-201ENST00000300527 COL4A1P02462 1669 aa15.77■□□□□ 0.12
COL6A2-201ENST00000300527 DHX34Q14147 1143 aaKnown RBP15.77■□□□□ 0.12
COL6A2-201ENST00000300527 EDRF1Q3B7T1 1238 aa15.77■□□□□ 0.12
COL6A2-201ENST00000300527 RBM26Q5T8P6 1007 aaKnown RBP15.77■□□□□ 0.12
COL6A2-201ENST00000300527 LONP2Q86WA8 852 aa15.77■□□□□ 0.12
COL6A2-201ENST00000300527 RNF217Q8TC41 542 aa15.77■□□□□ 0.12
COL6A2-201ENST00000300527 NAF1Q96HR8 494 aaKnown RBP15.77■□□□□ 0.12
COL6A2-201ENST00000300527 ZCWPW1Q9H0M4 648 aa15.77■□□□□ 0.12
COL6A2-201ENST00000300527 RGL1Q9NZL6 768 aa15.77■□□□□ 0.12
COL6A2-201ENST00000300527 LGR5O75473 907 aa15.77■□□□□ 0.11
COL6A2-201ENST00000300527 SMNDC1O75940 238 aaKnown RBP eCLIP15.77■□□□□ 0.11
COL6A2-201ENST00000300527 ABL2P42684 1182 aa15.77■□□□□ 0.11
COL6A2-201ENST00000300527 RIPK1Q13546 671 aa15.77■□□□□ 0.11
COL6A2-201ENST00000300527 GIT2Q14161 759 aa15.77■□□□□ 0.11
COL6A2-201ENST00000300527 SEPT2Q15019 361 aa15.77■□□□□ 0.11
COL6A2-201ENST00000300527 USH1GQ495M9 461 aa15.77■□□□□ 0.11
COL6A2-201ENST00000300527 CATSPER3Q86XQ3 398 aa15.77■□□□□ 0.11
COL6A2-201ENST00000300527 PITPNM3Q9BZ71 974 aa15.77■□□□□ 0.11
COL6A2-201ENST00000300527 MYH3P11055 1940 aa15.76■□□□□ 0.11
COL6A2-201ENST00000300527 TOM1O60784 492 aa15.76■□□□□ 0.11
COL6A2-201ENST00000300527 FAM13AO94988 1023 aa15.76■□□□□ 0.11
COL6A2-201ENST00000300527 TMEM253P0C7T8 217 aa15.76■□□□□ 0.11
COL6A2-201ENST00000300527 PYGMP11217 842 aa15.76■□□□□ 0.11
COL6A2-201ENST00000300527 CHKAP35790 457 aa15.76■□□□□ 0.11
COL6A2-201ENST00000300527 TMED2Q15363 201 aa15.76■□□□□ 0.11
COL6A2-201ENST00000300527 ZDHHC14Q8IZN3 488 aa15.76■□□□□ 0.11
COL6A2-201ENST00000300527 SPOCK2Q92563 424 aa15.76■□□□□ 0.11
COL6A2-201ENST00000300527 SRP68Q9UHB9 627 aaKnown RBP15.76■□□□□ 0.11
COL6A2-201ENST00000300527 MTUS1Q9ULD2 1270 aa15.76■□□□□ 0.11
COL6A2-201ENST00000300527 COL18A1P39060 1754 aa15.76■□□□□ 0.11
COL6A2-201ENST00000300527 PPP1R11O60927 126 aaPredicted RBP15.76■□□□□ 0.11
COL6A2-201ENST00000300527 AKR1B1P15121 316 aa15.76■□□□□ 0.11
COL6A2-201ENST00000300527 HOXD13P35453 343 aa15.76■□□□□ 0.11
COL6A2-201ENST00000300527 PRKCIP41743 596 aa15.76■□□□□ 0.11
COL6A2-201ENST00000300527 GRIK3Q13003 919 aa15.76■□□□□ 0.11
COL6A2-201ENST00000300527 DNAJC3Q13217 504 aa15.76■□□□□ 0.11
COL6A2-201ENST00000300527 SPIRE2Q8WWL2 714 aa15.76■□□□□ 0.11
COL6A2-201ENST00000300527 C9orf72Q96LT7 481 aa15.76■□□□□ 0.11
COL6A2-201ENST00000300527 PCIF1Q9H4Z3 704 aa15.76■□□□□ 0.11
COL6A2-201ENST00000300527 JMJD4Q9H9V9 463 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms