RNA–Protein interactions for RNA: ENST00000300107.7

CLPX-201, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPX, Length 4,695 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-201ENST00000300107 USP17L17D6RBQ6 530 aa13.67□□□□□ -0.22
CLPX-201ENST00000300107 USP17L19D6RCP7 530 aa13.67□□□□□ -0.22
CLPX-201ENST00000300107 USP17L20D6RJB6 530 aa13.67□□□□□ -0.22
CLPX-201ENST00000300107 FGFR4P22455 802 aa13.67□□□□□ -0.22
CLPX-201ENST00000300107 RFX1P22670 979 aa13.67□□□□□ -0.22
CLPX-201ENST00000300107 USP17L24Q0WX57 530 aa13.67□□□□□ -0.22
CLPX-201ENST00000300107 SCARF1Q14162 830 aa13.67□□□□□ -0.22
CLPX-201ENST00000300107 ZNF772Q68DY9 489 aaPredicted RBP13.67□□□□□ -0.22
CLPX-201ENST00000300107 USP17L6PQ6QN14 398 aa13.67□□□□□ -0.22
CLPX-201ENST00000300107 CYFIP2Q96F07 1278 aa13.67□□□□□ -0.22
CLPX-201ENST00000300107 PRMT1Q99873 361 aaKnown RBP13.67□□□□□ -0.22
CLPX-201ENST00000300107 INTS2Q9H0H0 1204 aaKnown RBP13.67□□□□□ -0.22
CLPX-201ENST00000300107 PCDHA6Q9UN73 950 aa13.67□□□□□ -0.22
CLPX-201ENST00000300107 PCDHA8Q9Y5H6 950 aa13.67□□□□□ -0.22
CLPX-201ENST00000300107 SPDYE16A6NNV3 312 aaPredicted RBP13.66□□□□□ -0.22
CLPX-201ENST00000300107 CDH16O75309 829 aa13.66□□□□□ -0.22
CLPX-201ENST00000300107 RHOBTB3O94955 611 aa13.66□□□□□ -0.22
CLPX-201ENST00000300107 SOX5P35711 763 aa13.66□□□□□ -0.22
CLPX-201ENST00000300107 PDIA2Q13087 525 aaKnown RBP13.66□□□□□ -0.22
CLPX-201ENST00000300107 BIRC2Q13490 618 aa13.66□□□□□ -0.22
CLPX-201ENST00000300107 SPDYE2Q495Y8 402 aa13.66□□□□□ -0.22
CLPX-201ENST00000300107 IZUMO3Q5VZ72 239 aa13.66□□□□□ -0.22
CLPX-201ENST00000300107 MIS18BP1Q6P0N0 1132 aa13.66□□□□□ -0.22
CLPX-201ENST00000300107 FRMD5Q7Z6J6 570 aa13.66□□□□□ -0.22
CLPX-201ENST00000300107 C1orf54Q8WWF1 131 aa13.66□□□□□ -0.22
CLPX-201ENST00000300107 IL25Q9H293 177 aa13.66□□□□□ -0.22
CLPX-201ENST00000300107 SLC4A7Q9Y6M7 1214 aa13.66□□□□□ -0.22
CLPX-201ENST00000300107 ARAP3Q8WWN8 1544 aa13.66□□□□□ -0.22
CLPX-201ENST00000300107 CPDO75976 1380 aa13.66□□□□□ -0.22
CLPX-201ENST00000300107 HNRNPCL1O60812 293 aaKnown RBP13.66□□□□□ -0.22
CLPX-201ENST00000300107 CCDC22O60826 627 aa13.66□□□□□ -0.22
CLPX-201ENST00000300107 OATP04181 439 aa13.66□□□□□ -0.22
CLPX-201ENST00000300107 FDPSP14324 419 aaKnown RBP13.66□□□□□ -0.22
CLPX-201ENST00000300107 NOP14P78316 857 aaKnown RBP13.66□□□□□ -0.22
CLPX-201ENST00000300107 IGBP1P78318 339 aa13.66□□□□□ -0.22
CLPX-201ENST00000300107 IRX1P78414 480 aaPredicted RBP13.66□□□□□ -0.22
CLPX-201ENST00000300107 MIGA2Q7L4E1 593 aa13.66□□□□□ -0.22
CLPX-201ENST00000300107 ZBED8Q8IZ13 594 aa13.66□□□□□ -0.22
CLPX-201ENST00000300107 CCDC124Q96CT7 223 aaKnown RBP13.66□□□□□ -0.22
CLPX-201ENST00000300107 KRT82Q9NSB4 513 aa13.66□□□□□ -0.22
CLPX-201ENST00000300107 L1RE1Q9UN81 338 aa13.66□□□□□ -0.22
CLPX-201ENST00000300107 TRPM1Q7Z4N2 1603 aa13.66□□□□□ -0.22
CLPX-201ENST00000300107 ANXA13P27216 316 aa13.66□□□□□ -0.22
CLPX-201ENST00000300107 INPP1P49441 399 aa13.66□□□□□ -0.22
CLPX-201ENST00000300107 KLC1Q07866 573 aa13.66□□□□□ -0.22
CLPX-201ENST00000300107 TAF1BQ53T94 588 aaPredicted RBP13.66□□□□□ -0.22
CLPX-201ENST00000300107 RABGAP1LQ5R372 815 aa13.66□□□□□ -0.22
CLPX-201ENST00000300107 HP1BP3Q5SSJ5 553 aaPredicted RBP13.66□□□□□ -0.22
CLPX-201ENST00000300107 MYLK4Q86YV6 388 aaPredicted RBP13.66□□□□□ -0.22
CLPX-201ENST00000300107 RHOT1Q8IXI2 618 aa13.66□□□□□ -0.22
CLPX-201ENST00000300107 HSPH1Q92598 858 aa13.66□□□□□ -0.22
CLPX-201ENST00000300107 LPXNO60711 386 aa13.66□□□□□ -0.22
CLPX-201ENST00000300107 VAMP7P51809 220 aa13.66□□□□□ -0.22
CLPX-201ENST00000300107 CACNB3P54284 484 aa13.66□□□□□ -0.22
CLPX-201ENST00000300107 TRPM8Q7Z2W7 1104 aa13.66□□□□□ -0.22
CLPX-201ENST00000300107 NUDCD3Q8IVD9 361 aa13.66□□□□□ -0.22
CLPX-201ENST00000300107 AGGF1Q8N302 714 aaeCLIP13.66□□□□□ -0.224e-7■□□□□ 8.8
CLPX-201ENST00000300107 MSTO1Q9BUK6 570 aa13.66□□□□□ -0.22
CLPX-201ENST00000300107 TMEM260Q9NX78 707 aa13.66□□□□□ -0.22
CLPX-201ENST00000300107 ZNF609O15014 1411 aa13.65□□□□□ -0.22
CLPX-201ENST00000300107 POTEFA5A3E0 1075 aa13.65□□□□□ -0.22
CLPX-201ENST00000300107 FAM205CA6NFA0 338 aa13.65□□□□□ -0.22
CLPX-201ENST00000300107 LDHAP00338 332 aaKnown RBP13.65□□□□□ -0.22
CLPX-201ENST00000300107 POTEIP0CG38 1075 aa13.65□□□□□ -0.22
CLPX-201ENST00000300107 KITP10721 976 aa13.65□□□□□ -0.22
CLPX-201ENST00000300107 RABL6Q3YEC7 729 aaPredicted RBP13.65□□□□□ -0.22
CLPX-201ENST00000300107 POTEGQ6S5H5 508 aa13.65□□□□□ -0.22
CLPX-201ENST00000300107 POTEEQ6S8J3 1075 aa13.65□□□□□ -0.22
CLPX-201ENST00000300107 SCARA5Q6ZMJ2 495 aa13.65□□□□□ -0.22
CLPX-201ENST00000300107 VPS39Q96JC1 886 aa13.65□□□□□ -0.22
CLPX-201ENST00000300107 LCMT1Q9UIC8 334 aa13.65□□□□□ -0.22
CLPX-201ENST00000300107 ANGPTL3Q9Y5C1 460 aa13.65□□□□□ -0.22
CLPX-201ENST00000300107 KPNA7A9QM74 516 aa13.65□□□□□ -0.22
CLPX-201ENST00000300107 CALB1P05937 261 aa13.65□□□□□ -0.22
CLPX-201ENST00000300107 PPP6R3Q5H9R7 873 aaPredicted RBP13.65□□□□□ -0.22
CLPX-201ENST00000300107 PPP1R18Q6NYC8 613 aa13.65□□□□□ -0.22
CLPX-201ENST00000300107 PADI6Q6TGC4 694 aa13.65□□□□□ -0.22
CLPX-201ENST00000300107 TRIM67Q6ZTA4 783 aa13.65□□□□□ -0.22
CLPX-201ENST00000300107 OR2W6PQ8NHA6 318 aa13.65□□□□□ -0.22
CLPX-201ENST00000300107 IGDCC4Q8TDY8 1250 aa13.65□□□□□ -0.22
CLPX-201ENST00000300107 SH3RF3Q8TEJ3 882 aaPredicted RBP13.65□□□□□ -0.22
CLPX-201ENST00000300107 SGSM3Q96HU1 749 aa13.65□□□□□ -0.22
CLPX-201ENST00000300107 PNKPQ96T60 521 aa13.65□□□□□ -0.22
CLPX-201ENST00000300107 CACYBPQ9HB71 228 aaKnown RBP13.65□□□□□ -0.22
CLPX-201ENST00000300107 KIAA1586Q9HCI6 787 aa13.65□□□□□ -0.22
CLPX-201ENST00000300107 ZBBXA8MT70 800 aa13.65□□□□□ -0.22
CLPX-201ENST00000300107 STXBP3O00186 592 aa13.65□□□□□ -0.22
CLPX-201ENST00000300107 FOXP2O15409 715 aa13.65□□□□□ -0.22
CLPX-201ENST00000300107 TDP2O95551 362 aa13.65□□□□□ -0.22
CLPX-201ENST00000300107 CCND1P24385 295 aa13.65□□□□□ -0.22
CLPX-201ENST00000300107 PGM1P36871 562 aa13.65□□□□□ -0.22
CLPX-201ENST00000300107 KRT17Q04695 432 aa13.65□□□□□ -0.22
CLPX-201ENST00000300107 KIF22Q14807 665 aa13.65□□□□□ -0.22
CLPX-201ENST00000300107 PTGISQ16647 500 aa13.65□□□□□ -0.22
CLPX-201ENST00000300107 ZNF394Q53GI3 561 aa13.65□□□□□ -0.22
CLPX-201ENST00000300107 GRAMD4Q6IC98 578 aa13.65□□□□□ -0.22
CLPX-201ENST00000300107 WDR93Q6P2C0 686 aa13.65□□□□□ -0.22
CLPX-201ENST00000300107 SLC30A9Q6PML9 568 aa13.65□□□□□ -0.22
CLPX-201ENST00000300107 FOXP4Q8IVH2 680 aaPredicted RBP13.65□□□□□ -0.22
CLPX-201ENST00000300107 BBS5Q8N3I7 341 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms