RNA–Protein interactions for RNA: ENST00000285199.11

USP43-201, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP43, Length 4,169 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-201ENST00000285199 DLGAP2Q9P1A6 1054 aa16.82■□□□□ 0.28
USP43-201ENST00000285199 MARCOQ9UEW3 520 aaPredicted RBP16.82■□□□□ 0.28
USP43-201ENST00000285199 ARL2BPQ9Y2Y0 163 aa16.82■□□□□ 0.28
USP43-201ENST00000285199 COMMD10Q9Y6G5 202 aa16.82■□□□□ 0.28
USP43-201ENST00000285199 TCRBV5S4A2TA0A5A2 114 aa16.81■□□□□ 0.28
USP43-201ENST00000285199 HSPA6P17066 643 aa16.81■□□□□ 0.28
USP43-201ENST00000285199 RANBP1P43487 201 aa16.81■□□□□ 0.28
USP43-201ENST00000285199 TBC1D22AQ8WUA7 517 aa16.81■□□□□ 0.28
USP43-201ENST00000285199 PPP1R9AQ9ULJ8 1098 aa16.81■□□□□ 0.28
USP43-201ENST00000285199 PTPRUQ92729 1446 aa16.81■□□□□ 0.28
USP43-201ENST00000285199 A0A1W2PQJ5 194 aa16.81■□□□□ 0.28
USP43-201ENST00000285199 AGPSO00116 658 aa16.81■□□□□ 0.28
USP43-201ENST00000285199 FOXP2O15409 715 aa16.81■□□□□ 0.28
USP43-201ENST00000285199 MAP3K7O43318 606 aa16.81■□□□□ 0.28
USP43-201ENST00000285199 OSTNP61366 133 aa16.81■□□□□ 0.28
USP43-201ENST00000285199 CDR2Q01850 454 aa16.81■□□□□ 0.28
USP43-201ENST00000285199 ABCB5Q2M3G0 1257 aa16.81■□□□□ 0.28
USP43-201ENST00000285199 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.81■□□□□ 0.28
USP43-201ENST00000285199 ANKRD20A8PQ5CZ79 823 aa16.81■□□□□ 0.28
USP43-201ENST00000285199 CENPPQ6IPU0 288 aa16.81■□□□□ 0.28
USP43-201ENST00000285199 AADACL2Q6P093 401 aa16.81■□□□□ 0.28
USP43-201ENST00000285199 SPATA24Q86W54 205 aa16.81■□□□□ 0.28
USP43-201ENST00000285199 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.81■□□□□ 0.28
USP43-201ENST00000285199 CFAP57Q96MR6 1250 aa16.81■□□□□ 0.28
USP43-201ENST00000285199 TEKT3Q9BXF9 490 aa16.81■□□□□ 0.28
USP43-201ENST00000285199 CYP4F11Q9HBI6 524 aa16.81■□□□□ 0.28
USP43-201ENST00000285199 OVOS2A0A0G2JMS6 1433 aa16.81■□□□□ 0.28
USP43-201ENST00000285199 ZBTB5O15062 677 aa16.81■□□□□ 0.28
USP43-201ENST00000285199 YY1P25490 414 aa16.81■□□□□ 0.28
USP43-201ENST00000285199 GEN1Q17RS7 908 aa16.81■□□□□ 0.28
USP43-201ENST00000285199 SYNJ2BP-COX16A0A087WUM0 186 aa16.81■□□□□ 0.28
USP43-201ENST00000285199 CFAP73A6NFT4 308 aa16.81■□□□□ 0.28
USP43-201ENST00000285199 ZNF263O14978 683 aa16.81■□□□□ 0.28
USP43-201ENST00000285199 SLC16A4O15374 487 aa16.81■□□□□ 0.28
USP43-201ENST00000285199 CFLARO15519 480 aa16.81■□□□□ 0.28
USP43-201ENST00000285199 PIK3CAP42336 1068 aa16.81■□□□□ 0.28
USP43-201ENST00000285199 GPS1Q13098 491 aa16.81■□□□□ 0.28
USP43-201ENST00000285199 DRP2Q13474 957 aa16.81■□□□□ 0.28
USP43-201ENST00000285199 TBC1D9BQ66K14 1250 aa16.81■□□□□ 0.28
USP43-201ENST00000285199 SCARA5Q6ZMJ2 495 aa16.81■□□□□ 0.28
USP43-201ENST00000285199 SUGP1Q8IWZ8 645 aaKnown RBP16.81■□□□□ 0.28
USP43-201ENST00000285199 IFT122Q9HBG6 1241 aa16.81■□□□□ 0.28
USP43-201ENST00000285199 COX16Q9P0S2 106 aa16.81■□□□□ 0.28
USP43-201ENST00000285199 HAO1Q9UJM8 370 aa16.81■□□□□ 0.28
USP43-201ENST00000285199 ARAP3Q8WWN8 1544 aa16.81■□□□□ 0.28
USP43-201ENST00000285199 SEPT2Q15019 361 aa16.8■□□□□ 0.28
USP43-201ENST00000285199 LRIG3Q6UXM1 1119 aa16.8■□□□□ 0.28
USP43-201ENST00000285199 PPP4R3CPQ6ZMV5 832 aa16.8■□□□□ 0.28
USP43-201ENST00000285199 KCNK18Q7Z418 384 aa16.8■□□□□ 0.28
USP43-201ENST00000285199 TXNRD3Q86VQ6 643 aa16.8■□□□□ 0.28
USP43-201ENST00000285199 ZNF354CQ86Y25 554 aa16.8■□□□□ 0.28
USP43-201ENST00000285199 LRRC43Q8N309 656 aa16.8■□□□□ 0.28
USP43-201ENST00000285199 EDEM3Q9BZQ6 932 aa16.8■□□□□ 0.28
USP43-201ENST00000285199 YY1AP1Q9H869 796 aa16.8■□□□□ 0.28
USP43-201ENST00000285199 UBN1Q9NPG3 1134 aa16.8■□□□□ 0.28
USP43-201ENST00000285199 KDSRQ06136 332 aa16.8■□□□□ 0.28
USP43-201ENST00000285199 IZUMO3Q5VZ72 239 aa16.8■□□□□ 0.28
USP43-201ENST00000285199 DCLK2Q8N568 766 aa16.8■□□□□ 0.28
USP43-201ENST00000285199 CFAP36Q96G28 342 aa16.8■□□□□ 0.28
USP43-201ENST00000285199 SLC13A1Q9BZW2 595 aa16.8■□□□□ 0.28
USP43-201ENST00000285199 METTL5Q9NRN9 209 aaKnown RBP16.8■□□□□ 0.28
USP43-201ENST00000285199 NXF1Q9UBU9 619 aaKnown RBP16.8■□□□□ 0.28
USP43-201ENST00000285199 MIF4GDA9UHW6 222 aaKnown RBP16.8■□□□□ 0.28
USP43-201ENST00000285199 QPCTQ16769 361 aa16.8■□□□□ 0.28
USP43-201ENST00000285199 NACC1Q96RE7 527 aa16.8■□□□□ 0.28
USP43-201ENST00000285199 TAL1P17542 331 aaPredicted RBP16.79■□□□□ 0.28
USP43-201ENST00000285199 NCF2P19878 526 aaPredicted RBP16.79■□□□□ 0.28
USP43-201ENST00000285199 LGSNQ5TDP6 509 aa16.79■□□□□ 0.28
USP43-201ENST00000285199 TMEM154Q6P9G4 183 aa16.79■□□□□ 0.28
USP43-201ENST00000285199 SREK1Q8WXA9 508 aaKnown RBP16.79■□□□□ 0.28
USP43-201ENST00000285199 FAM237AA0A1B0GTK4 181 aa16.79■□□□□ 0.28
USP43-201ENST00000285199 BRDTQ58F21 947 aaPredicted RBP16.79■□□□□ 0.28
USP43-201ENST00000285199 FBXL16Q8N461 479 aa16.79■□□□□ 0.28
USP43-201ENST00000285199 CAVIN3Q969G5 261 aa16.79■□□□□ 0.28
USP43-201ENST00000285199 RIOK1Q9BRS2 568 aaKnown RBP16.79■□□□□ 0.28
USP43-201ENST00000285199 PLA2G12BQ9BX93 195 aa16.79■□□□□ 0.28
USP43-201ENST00000285199 MAD2L2Q9UI95 211 aa16.79■□□□□ 0.28
USP43-201ENST00000285199 SALL4Q9UJQ4 1053 aa16.79■□□□□ 0.28
USP43-201ENST00000285199 ADAMTS13Q76LX8 1427 aa16.79■□□□□ 0.28
USP43-201ENST00000285199 AGTP01019 485 aa16.79■□□□□ 0.28
USP43-201ENST00000285199 GAP43P17677 238 aa16.79■□□□□ 0.28
USP43-201ENST00000285199 RASA1P20936 1047 aa16.79■□□□□ 0.28
USP43-201ENST00000285199 TMPRSS15P98073 1019 aa16.79■□□□□ 0.28
USP43-201ENST00000285199 MEI1Q5TIA1 1274 aa16.79■□□□□ 0.28
USP43-201ENST00000285199 AGBL2Q5U5Z8 902 aa16.79■□□□□ 0.28
USP43-201ENST00000285199 NLRX1Q86UT6 975 aa16.79■□□□□ 0.28
USP43-201ENST00000285199 RFX6Q8HWS3 928 aa16.79■□□□□ 0.28
USP43-201ENST00000285199 PABPC3Q9H361 631 aaKnown RBP16.79■□□□□ 0.28
USP43-201ENST00000285199 SMYD2Q9NRG4 433 aa16.79■□□□□ 0.28
USP43-201ENST00000285199 ABCF3Q9NUQ8 709 aa16.79■□□□□ 0.28
USP43-201ENST00000285199 ADAM22Q9P0K1 906 aa16.79■□□□□ 0.28
USP43-201ENST00000285199 FAM187AA6NFU0 413 aa16.78■□□□□ 0.28
USP43-201ENST00000285199 PBX1P40424 430 aa16.78■□□□□ 0.28
USP43-201ENST00000285199 KCNMA1Q12791 1236 aa16.78■□□□□ 0.28
USP43-201ENST00000285199 PDIA2Q13087 525 aaKnown RBP16.78■□□□□ 0.28
USP43-201ENST00000285199 MAP7Q14244 749 aa16.78■□□□□ 0.28
USP43-201ENST00000285199 ZNF507Q8TCN5 953 aa16.78■□□□□ 0.28
USP43-201ENST00000285199 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.78■□□□□ 0.28
USP43-201ENST00000285199 STOML1Q9UBI4 398 aa16.78■□□□□ 0.28
USP43-201ENST00000285199 KIDINS220Q9ULH0 1771 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms