RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 TNFAIP2Q03169 654 aa9.24□□□□□ -0.93
SCUBE3-201ENST00000274938 LBRQ14739 615 aaKnown RBP9.24□□□□□ -0.93
SCUBE3-201ENST00000274938 PLEKHM3Q6ZWE6 761 aa9.24□□□□□ -0.93
SCUBE3-201ENST00000274938 PRUNE1Q86TP1 453 aa9.24□□□□□ -0.93
SCUBE3-201ENST00000274938 RHOT1Q8IXI2 618 aa9.24□□□□□ -0.93
SCUBE3-201ENST00000274938 LEMD3Q9Y2U8 911 aa9.24□□□□□ -0.93
SCUBE3-201ENST00000274938 PTPRKQ15262 1439 aa9.24□□□□□ -0.93
SCUBE3-201ENST00000274938 JAK3P52333 1124 aa9.24□□□□□ -0.93
SCUBE3-201ENST00000274938 RCAN1P53805 252 aa9.24□□□□□ -0.93
SCUBE3-201ENST00000274938 SLC44A4Q53GD3 710 aa9.24□□□□□ -0.93
SCUBE3-201ENST00000274938 BTNL9Q6UXG8 535 aa9.24□□□□□ -0.93
SCUBE3-201ENST00000274938 ENOSF1Q7L5Y1 443 aa9.24□□□□□ -0.93
SCUBE3-201ENST00000274938 RRM2BQ7LG56 351 aa9.24□□□□□ -0.93
SCUBE3-201ENST00000274938 LUZP2Q86TE4 346 aa9.24□□□□□ -0.93
SCUBE3-201ENST00000274938 PDLIM2Q96JY6 352 aa9.24□□□□□ -0.93
SCUBE3-201ENST00000274938 RUBCNLQ9H714 662 aa9.24□□□□□ -0.93
SCUBE3-201ENST00000274938 NGRNQ9NPE2 291 aaKnown RBP9.24□□□□□ -0.93
SCUBE3-201ENST00000274938 USP15Q9Y4E8 981 aaPredicted RBP9.24□□□□□ -0.93
SCUBE3-201ENST00000274938 ZNF518AQ6AHZ1 1483 aa9.24□□□□□ -0.93
SCUBE3-201ENST00000274938 M0R2C6 588 aa9.24□□□□□ -0.93
SCUBE3-201ENST00000274938 GSNP06396 782 aa9.24□□□□□ -0.93
SCUBE3-201ENST00000274938 ROR1Q01973 937 aa9.24□□□□□ -0.93
SCUBE3-201ENST00000274938 KCNA1Q09470 495 aa9.24□□□□□ -0.93
SCUBE3-201ENST00000274938 NR5A1Q13285 461 aa9.24□□□□□ -0.93
SCUBE3-201ENST00000274938 FAM160B2Q86V87 743 aa9.24□□□□□ -0.93
SCUBE3-201ENST00000274938 CDR2LQ86X02 465 aaPredicted RBP9.24□□□□□ -0.93
SCUBE3-201ENST00000274938 TEKT4Q8WW24 435 aa9.24□□□□□ -0.93
SCUBE3-201ENST00000274938 PHF21AQ96BD5 680 aa9.24□□□□□ -0.93
SCUBE3-201ENST00000274938 IFT43Q96FT9 208 aa9.24□□□□□ -0.93
SCUBE3-201ENST00000274938 CHAMP1Q96JM3 812 aa9.24□□□□□ -0.93
SCUBE3-201ENST00000274938 ACAP3Q96P50 834 aa9.24□□□□□ -0.93
SCUBE3-201ENST00000274938 FOXP3Q9BZS1 431 aa9.24□□□□□ -0.93
SCUBE3-201ENST00000274938 HACD3Q9P035 362 aa9.24□□□□□ -0.93
SCUBE3-201ENST00000274938 ANGPT2O15123 496 aa9.24□□□□□ -0.93
SCUBE3-201ENST00000274938 ACADSP16219 412 aa9.24□□□□□ -0.93
SCUBE3-201ENST00000274938 LLGL1Q15334 1064 aa9.24□□□□□ -0.93
SCUBE3-201ENST00000274938 LRRC24Q50LG9 513 aa9.24□□□□□ -0.93
SCUBE3-201ENST00000274938 TMEM154Q6P9G4 183 aa9.24□□□□□ -0.93
SCUBE3-201ENST00000274938 ZBED8Q8IZ13 594 aa9.24□□□□□ -0.93
SCUBE3-201ENST00000274938 CEP95Q96GE4 821 aa9.24□□□□□ -0.93
SCUBE3-201ENST00000274938 ADNPQ9H2P0 1102 aa9.24□□□□□ -0.93
SCUBE3-201ENST00000274938 BTG4Q9NY30 223 aa9.24□□□□□ -0.93
SCUBE3-201ENST00000274938 ABCC2Q92887 1545 aa9.24□□□□□ -0.93
SCUBE3-201ENST00000274938 KLHL2O95198 593 aa9.24□□□□□ -0.93
SCUBE3-201ENST00000274938 ZSCAN20P17040 1043 aaPredicted RBP9.24□□□□□ -0.93
SCUBE3-201ENST00000274938 GUCY1A3Q02108 690 aa9.24□□□□□ -0.93
SCUBE3-201ENST00000274938 CCDC15Q0P6D6 951 aa9.24□□□□□ -0.93
SCUBE3-201ENST00000274938 SYDE2Q5VT97 1194 aa9.24□□□□□ -0.93
SCUBE3-201ENST00000274938 LONP2Q86WA8 852 aa9.24□□□□□ -0.93
SCUBE3-201ENST00000274938 BMP3P12645 472 aa9.24□□□□□ -0.93
SCUBE3-201ENST00000274938 ZNF18P17022 549 aa9.24□□□□□ -0.93
SCUBE3-201ENST00000274938 C4BPBP20851 252 aa9.24□□□□□ -0.93
SCUBE3-201ENST00000274938 IZUMO3Q5VZ72 239 aa9.24□□□□□ -0.93
SCUBE3-201ENST00000274938 SETD3Q86TU7 594 aaPredicted RBP9.24□□□□□ -0.93
SCUBE3-201ENST00000274938 ZNF408Q9H9D4 720 aa9.24□□□□□ -0.93
SCUBE3-201ENST00000274938 PCDHGB4Q9UN71 923 aa9.24□□□□□ -0.93
SCUBE3-201ENST00000274938 PNMA6FA0A0J9YX94 578 aa9.23□□□□□ -0.93
SCUBE3-201ENST00000274938 RASSF9O75901 435 aa9.23□□□□□ -0.93
SCUBE3-201ENST00000274938 BLVRAP53004 296 aa9.23□□□□□ -0.93
SCUBE3-201ENST00000274938 NLRP11P59045 1033 aaKnown RBP9.23□□□□□ -0.93
SCUBE3-201ENST00000274938 KRT33BQ14525 404 aa9.23□□□□□ -0.93
SCUBE3-201ENST00000274938 HEATR6Q6AI08 1181 aaKnown RBP9.23□□□□□ -0.93
SCUBE3-201ENST00000274938 RFFLQ8WZ73 363 aa9.23□□□□□ -0.93
SCUBE3-201ENST00000274938 MMTAG2Q9BU76 263 aaKnown RBP9.23□□□□□ -0.93
SCUBE3-201ENST00000274938 TRIM54Q9BYV2 358 aa9.23□□□□□ -0.93
SCUBE3-201ENST00000274938 ITM2BQ9Y287 266 aa9.23□□□□□ -0.93
SCUBE3-201ENST00000274938 WDR19Q8NEZ3 1342 aa9.23□□□□□ -0.93
SCUBE3-201ENST00000274938 MYOM2P54296 1465 aa9.23□□□□□ -0.93
SCUBE3-201ENST00000274938 ZNF263O14978 683 aa9.23□□□□□ -0.93
SCUBE3-201ENST00000274938 SUPT3HO75486 399 aa9.23□□□□□ -0.93
SCUBE3-201ENST00000274938 SERPINB3P29508 390 aa9.23□□□□□ -0.93
SCUBE3-201ENST00000274938 TYK2P29597 1187 aa9.23□□□□□ -0.93
SCUBE3-201ENST00000274938 SLC1A1P43005 524 aa9.23□□□□□ -0.93
SCUBE3-201ENST00000274938 TJAP1Q5JTD0 557 aa9.23□□□□□ -0.93
SCUBE3-201ENST00000274938 CCDC137Q6PK04 289 aaKnown RBP9.23□□□□□ -0.93
SCUBE3-201ENST00000274938 TRABDQ9H4I3 376 aa9.23□□□□□ -0.93
SCUBE3-201ENST00000274938 IL1RAPL1Q9NZN1 696 aa9.23□□□□□ -0.93
SCUBE3-201ENST00000274938 STAP1Q9ULZ2 295 aa9.23□□□□□ -0.93
SCUBE3-201ENST00000274938 PLXNC1O60486 1568 aa9.23□□□□□ -0.93
SCUBE3-201ENST00000274938 LOC102724159A0A0B4J2E5 919 aa9.23□□□□□ -0.93
SCUBE3-201ENST00000274938 EIF4E1BA6NMX2 242 aaKnown RBP9.23□□□□□ -0.93
SCUBE3-201ENST00000274938 PJA2O43164 708 aa9.23□□□□□ -0.93
SCUBE3-201ENST00000274938 NR3C1P04150 777 aa9.23□□□□□ -0.93
SCUBE3-201ENST00000274938 SERPINB9P50453 376 aa9.23□□□□□ -0.93
SCUBE3-201ENST00000274938 DMC1Q14565 340 aa9.23□□□□□ -0.93
SCUBE3-201ENST00000274938 PWP2Q15269 919 aaKnown RBP9.23□□□□□ -0.93
SCUBE3-201ENST00000274938 DEPDC1Q5TB30 811 aa9.23□□□□□ -0.93
SCUBE3-201ENST00000274938 NFRKBQ6P4R8 1299 aa9.23□□□□□ -0.93
SCUBE3-201ENST00000274938 XXYLT1Q8NBI6 393 aa9.23□□□□□ -0.93
SCUBE3-201ENST00000274938 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.23□□□□□ -0.93
SCUBE3-201ENST00000274938 NUP85Q9BW27 656 aa9.23□□□□□ -0.93
SCUBE3-201ENST00000274938 DDX47Q9H0S4 455 aaKnown RBP9.23□□□□□ -0.93
SCUBE3-201ENST00000274938 DHX36Q9H2U1 1008 aaKnown RBP9.23□□□□□ -0.93
SCUBE3-201ENST00000274938 SESN1Q9Y6P5 492 aa9.23□□□□□ -0.93
SCUBE3-201ENST00000274938 KCNA2P16389 499 aa9.23□□□□□ -0.93
SCUBE3-201ENST00000274938 SDC4P31431 198 aa9.23□□□□□ -0.93
SCUBE3-201ENST00000274938 PPP6R3Q5H9R7 873 aaPredicted RBP9.23□□□□□ -0.93
SCUBE3-201ENST00000274938 FAM83BQ5T0W9 1011 aa9.23□□□□□ -0.93
SCUBE3-201ENST00000274938 WLSQ5T9L3 541 aa9.23□□□□□ -0.93
SCUBE3-201ENST00000274938 C3orf20Q8ND61 904 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms