RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 SNRNP48Q6IEG0 339 aaKnown RBP17.6■□□□□ 0.41
CTCF-201ENST00000264010 CPLX4Q7Z7G2 160 aa17.6■□□□□ 0.41
CTCF-201ENST00000264010 GLYCTKQ8IVS8 523 aa17.6■□□□□ 0.41
CTCF-201ENST00000264010 SLC35C1Q96A29 364 aa17.6■□□□□ 0.41
CTCF-201ENST00000264010 NT5C1BQ96P26 610 aa17.6■□□□□ 0.41
CTCF-201ENST00000264010 TCHPQ9BT92 498 aa17.6■□□□□ 0.41
CTCF-201ENST00000264010 SEPT9Q9UHD8 586 aaPredicted RBP17.6■□□□□ 0.41
CTCF-201ENST00000264010 C10orf71Q711Q0 1435 aa17.6■□□□□ 0.41
CTCF-201ENST00000264010 EMSYQ7Z589 1322 aa17.6■□□□□ 0.41
CTCF-201ENST00000264010 GOLGA8IPA6NC78 632 aa17.6■□□□□ 0.41
CTCF-201ENST00000264010 GOLGA8JA6NMD2 632 aa17.6■□□□□ 0.41
CTCF-201ENST00000264010 EVI5O60447 810 aa17.6■□□□□ 0.41
CTCF-201ENST00000264010 PLS3P13797 630 aa17.6■□□□□ 0.41
CTCF-201ENST00000264010 RPS12P25398 132 aaKnown RBP17.6■□□□□ 0.41
CTCF-201ENST00000264010 NSUN6Q8TEA1 469 aaKnown RBP17.6■□□□□ 0.41
CTCF-201ENST00000264010 LENG9Q96B70 501 aa17.6■□□□□ 0.41
CTCF-201ENST00000264010 MS4A14Q96JA4 679 aa17.6■□□□□ 0.41
CTCF-201ENST00000264010 APEX2Q9UBZ4 518 aa17.6■□□□□ 0.41
CTCF-201ENST00000264010 A0A087WUV0 522 aaPredicted RBP17.6■□□□□ 0.41
CTCF-201ENST00000264010 HNRNPDLO14979 420 aaKnown RBP17.6■□□□□ 0.41
CTCF-201ENST00000264010 RPS6P62753 249 aaKnown RBP17.6■□□□□ 0.41
CTCF-201ENST00000264010 NEDD9Q14511 834 aa17.6■□□□□ 0.41
CTCF-201ENST00000264010 MICALL2Q8IY33 904 aa17.6■□□□□ 0.41
CTCF-201ENST00000264010 KIRREL3Q8IZU9 778 aa17.6■□□□□ 0.41
CTCF-201ENST00000264010 IMPG2Q9BZV3 1241 aa17.6■□□□□ 0.41
CTCF-201ENST00000264010 MAP3K20Q9NYL2 800 aaKnown RBP17.6■□□□□ 0.41
CTCF-201ENST00000264010 SMARCAL1Q9NZC9 954 aa17.6■□□□□ 0.41
CTCF-201ENST00000264010 DLATP10515 647 aaKnown RBP17.59■□□□□ 0.41
CTCF-201ENST00000264010 SPIRE1Q08AE8 756 aa17.59■□□□□ 0.41
CTCF-201ENST00000264010 RBBP5Q15291 538 aaKnown RBP17.59■□□□□ 0.41
CTCF-201ENST00000264010 EFCAB13Q8IY85 973 aa17.59■□□□□ 0.41
CTCF-201ENST00000264010 SAMD3Q8N6K7 520 aa17.59■□□□□ 0.41
CTCF-201ENST00000264010 TAAR1Q96RJ0 339 aa17.59■□□□□ 0.41
CTCF-201ENST00000264010 GANQ9H2C0 597 aa17.59■□□□□ 0.41
CTCF-201ENST00000264010 ZBTB39O15060 712 aa17.59■□□□□ 0.41
CTCF-201ENST00000264010 LIG4P49917 911 aa17.59■□□□□ 0.41
CTCF-201ENST00000264010 JAG1P78504 1218 aa17.59■□□□□ 0.41
CTCF-201ENST00000264010 ALS2CLQ60I27 953 aa17.59■□□□□ 0.41
CTCF-201ENST00000264010 TRIM68Q6AZZ1 485 aa17.59■□□□□ 0.41
CTCF-201ENST00000264010 GJB7Q6PEY0 223 aa17.59■□□□□ 0.41
CTCF-201ENST00000264010 ZNF571Q7Z3V5 609 aaPredicted RBP17.59■□□□□ 0.41
CTCF-201ENST00000264010 ZHX2Q9Y6X8 837 aa17.59■□□□□ 0.41
CTCF-201ENST00000264010 ITIH3Q06033 890 aa17.59■□□□□ 0.41
CTCF-201ENST00000264010 RRP1BQ14684 758 aaKnown RBP17.59■□□□□ 0.41
CTCF-201ENST00000264010 NIPA1Q7RTP0 329 aa17.59■□□□□ 0.41
CTCF-201ENST00000264010 ANKRD35Q8N283 1001 aa17.59■□□□□ 0.41
CTCF-201ENST00000264010 TRIM6Q9C030 488 aaPredicted RBP17.59■□□□□ 0.41
CTCF-201ENST00000264010 KIAA1683Q9H0B3 1180 aa17.59■□□□□ 0.41
CTCF-201ENST00000264010 PCDHA2Q9Y5H9 948 aa17.59■□□□□ 0.41
CTCF-201ENST00000264010 PCDHA10Q9Y5I2 948 aa17.59■□□□□ 0.41
CTCF-201ENST00000264010 CCDC188H7C350 402 aa17.58■□□□□ 0.41
CTCF-201ENST00000264010 SORBS3O60504 671 aa17.58■□□□□ 0.41
CTCF-201ENST00000264010 LCA5LO95447 670 aa17.58■□□□□ 0.41
CTCF-201ENST00000264010 BAATQ14032 418 aaPredicted RBP17.58■□□□□ 0.41
CTCF-201ENST00000264010 DEPTORQ8TB45 409 aa17.58■□□□□ 0.41
CTCF-201ENST00000264010 PURBQ96QR8 312 aaKnown RBP17.58■□□□□ 0.41
CTCF-201ENST00000264010 RBM12Q9NTZ6 932 aaKnown RBP17.58■□□□□ 0.41
CTCF-201ENST00000264010 CNOT7Q9UIV1 285 aaKnown RBP17.58■□□□□ 0.41
CTCF-201ENST00000264010 ASTN1O14525 1302 aa17.58■□□□□ 0.41
CTCF-201ENST00000264010 IGLV3-22A0A075B6J6 115 aa17.58■□□□□ 0.4
CTCF-201ENST00000264010 SMIM23A6NLE4 172 aa17.58■□□□□ 0.4
CTCF-201ENST00000264010 MAP2K7O14733 419 aa17.58■□□□□ 0.4
CTCF-201ENST00000264010 EDIL3O43854 480 aa17.58■□□□□ 0.4
CTCF-201ENST00000264010 NEFHP12036 1026 aa17.58■□□□□ 0.4
CTCF-201ENST00000264010 KCNA1Q09470 495 aa17.58■□□□□ 0.4
CTCF-201ENST00000264010 MIS18BP1Q6P0N0 1132 aa17.58■□□□□ 0.4
CTCF-201ENST00000264010 CREG2Q8IUH2 290 aa17.58■□□□□ 0.4
CTCF-201ENST00000264010 ARFGAP2Q8N6H7 521 aa17.58■□□□□ 0.4
CTCF-201ENST00000264010 SYTL5Q8TDW5 730 aaPredicted RBP17.58■□□□□ 0.4
CTCF-201ENST00000264010 UBLCP1Q8WVY7 318 aaPredicted RBP17.58■□□□□ 0.4
CTCF-201ENST00000264010 SH2D3AQ9BRG2 576 aa17.58■□□□□ 0.4
CTCF-201ENST00000264010 PACSIN1Q9BY11 444 aa17.58■□□□□ 0.4
CTCF-201ENST00000264010 GLIS2Q9BZE0 524 aaPredicted RBP17.58■□□□□ 0.4
CTCF-201ENST00000264010 RAB17Q9H0T7 212 aa17.58■□□□□ 0.4
CTCF-201ENST00000264010 DDX60LQ5H9U9 1706 aaKnown RBP17.58■□□□□ 0.4
CTCF-201ENST00000264010 A6NNZ2 444 aa17.58■□□□□ 0.4
CTCF-201ENST00000264010 PDE6CP51160 858 aa17.58■□□□□ 0.4
CTCF-201ENST00000264010 POLGP54098 1239 aaPredicted RBP17.58■□□□□ 0.4
CTCF-201ENST00000264010 TUBB8Q3ZCM7 444 aa17.58■□□□□ 0.4
CTCF-201ENST00000264010 SUPT20HL1Q3ZLR7 823 aa17.58■□□□□ 0.4
CTCF-201ENST00000264010 PCNX4Q63HM2 1172 aa17.58■□□□□ 0.4
CTCF-201ENST00000264010 KCTD16Q68DU8 428 aa17.58■□□□□ 0.4
CTCF-201ENST00000264010 RHOT2Q8IXI1 618 aa17.58■□□□□ 0.4
CTCF-201ENST00000264010 MCPH1Q8NEM0 835 aa17.58■□□□□ 0.4
CTCF-201ENST00000264010 C7orf43Q8WVR3 580 aa17.58■□□□□ 0.4
CTCF-201ENST00000264010 DEFB129Q9H1M3 183 aa17.58■□□□□ 0.4
CTCF-201ENST00000264010 PPANQ9NQ55 473 aaKnown RBP17.58■□□□□ 0.4
CTCF-201ENST00000264010 INTUQ9ULD6 942 aa17.58■□□□□ 0.4
CTCF-201ENST00000264010 PPP1R9AQ9ULJ8 1098 aa17.58■□□□□ 0.4
CTCF-201ENST00000264010 NFU1Q9UMS0 254 aa17.58■□□□□ 0.4
CTCF-201ENST00000264010 LY75O60449 1722 aa17.58■□□□□ 0.4
CTCF-201ENST00000264010 TNNI1P19237 187 aa17.57■□□□□ 0.4
CTCF-201ENST00000264010 GALCP54803 685 aa17.57■□□□□ 0.4
CTCF-201ENST00000264010 MYBPC2Q14324 1141 aa17.57■□□□□ 0.4
CTCF-201ENST00000264010 RFFLQ8WZ73 363 aa17.57■□□□□ 0.4
CTCF-201ENST00000264010 TLR10Q9BXR5 811 aa17.57■□□□□ 0.4
CTCF-201ENST00000264010 TRIM31Q9BZY9 425 aa17.57■□□□□ 0.4
CTCF-201ENST00000264010 C1orf112Q9NSG2 853 aa17.57■□□□□ 0.4
CTCF-201ENST00000264010 GABBR1Q9UBS5 961 aa17.57■□□□□ 0.4
CTCF-201ENST00000264010 TPX2Q9ULW0 747 aaKnown RBP17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms