RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 PIK3R5Q8WYR1 880 aa6.31□□□□□ -1.4
TOPBP1-201ENST00000260810 MKNK1Q9BUB5 465 aa6.31□□□□□ -1.4
TOPBP1-201ENST00000260810 MKNK2Q9HBH9 465 aa6.31□□□□□ -1.4
TOPBP1-201ENST00000260810 TMLHEQ9NVH6 421 aa6.31□□□□□ -1.4
TOPBP1-201ENST00000260810 PDZD2O15018 2839 aa6.31□□□□□ -1.4
TOPBP1-201ENST00000260810 DDX3XO00571 662 aaKnown RBP eCLIP6.31□□□□□ -1.44e-19■■■■■ 43
TOPBP1-201ENST00000260810 CDR1P51861 262 aa6.31□□□□□ -1.4
TOPBP1-201ENST00000260810 GSTO1P78417 241 aa6.31□□□□□ -1.4
TOPBP1-201ENST00000260810 PABPC4Q13310 644 aaKnown RBP eCLIP6.31□□□□□ -1.49e-6■■■■□ 24.7
TOPBP1-201ENST00000260810 LRRFIP1Q32MZ4 808 aaKnown RBP6.31□□□□□ -1.4
TOPBP1-201ENST00000260810 SH3PXD2AQ5TCZ1 1133 aa6.31□□□□□ -1.4
TOPBP1-201ENST00000260810 ARHGEF26Q96DR7 871 aa6.31□□□□□ -1.4
TOPBP1-201ENST00000260810 KAT14Q9H8E8 782 aa6.31□□□□□ -1.4
TOPBP1-201ENST00000260810 ZNF500O60304 480 aaPredicted RBP6.31□□□□□ -1.4
TOPBP1-201ENST00000260810 TKTP29401 623 aaKnown RBP6.31□□□□□ -1.4
TOPBP1-201ENST00000260810 KCNJ4P48050 445 aa6.31□□□□□ -1.4
TOPBP1-201ENST00000260810 ENOX2Q16206 610 aaKnown RBP6.31□□□□□ -1.4
TOPBP1-201ENST00000260810 LSRQ86X29 649 aaPredicted RBP6.31□□□□□ -1.4
TOPBP1-201ENST00000260810 FBXO11Q86XK2 927 aa6.31□□□□□ -1.4
TOPBP1-201ENST00000260810 CDH22Q9UJ99 828 aa6.31□□□□□ -1.4
TOPBP1-201ENST00000260810 ANKRD12Q6UB98 2062 aa6.31□□□□□ -1.4
TOPBP1-201ENST00000260810 MMP3P08254 477 aa6.31□□□□□ -1.4
TOPBP1-201ENST00000260810 PON1P27169 355 aa6.31□□□□□ -1.4
TOPBP1-201ENST00000260810 STX17P56962 302 aa6.31□□□□□ -1.4
TOPBP1-201ENST00000260810 C2CD6Q53TS8 623 aa6.31□□□□□ -1.4
TOPBP1-201ENST00000260810 TCP11X2Q5H9J9 407 aa6.31□□□□□ -1.4
TOPBP1-201ENST00000260810 CCDC183Q5T5S1 534 aa6.31□□□□□ -1.4
TOPBP1-201ENST00000260810 LRRTM3Q86VH5 581 aa6.31□□□□□ -1.4
TOPBP1-201ENST00000260810 ZNF296Q8WUU4 475 aaPredicted RBP6.31□□□□□ -1.4
TOPBP1-201ENST00000260810 TATDN2Q93075 761 aa6.31□□□□□ -1.4
TOPBP1-201ENST00000260810 WBP2Q969T9 261 aa6.31□□□□□ -1.4
TOPBP1-201ENST00000260810 MFSD14AQ96MC6 490 aa6.31□□□□□ -1.4
TOPBP1-201ENST00000260810 KLC2Q9H0B6 622 aa6.31□□□□□ -1.4
TOPBP1-201ENST00000260810 AGPAT3Q9NRZ7 376 aa6.31□□□□□ -1.4
TOPBP1-201ENST00000260810 BMP2KQ9NSY1 1161 aaPredicted RBP6.31□□□□□ -1.4
TOPBP1-201ENST00000260810 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.31□□□□□ -1.4
TOPBP1-201ENST00000260810 A0A087X0T9 212 aa6.31□□□□□ -1.4
TOPBP1-201ENST00000260810 IKBKBO14920 756 aa6.31□□□□□ -1.4
TOPBP1-201ENST00000260810 ADCY5O95622 1261 aa6.31□□□□□ -1.4
TOPBP1-201ENST00000260810 FAM228BP0C875 321 aa6.31□□□□□ -1.4
TOPBP1-201ENST00000260810 AFMP43652 599 aa6.31□□□□□ -1.4
TOPBP1-201ENST00000260810 ADKP55263 362 aaKnown RBP6.31□□□□□ -1.4
TOPBP1-201ENST00000260810 PPP2R5BQ15173 497 aa6.31□□□□□ -1.4
TOPBP1-201ENST00000260810 FAM110CQ1W6H9 321 aa6.31□□□□□ -1.4
TOPBP1-201ENST00000260810 EEPD1Q7L9B9 569 aa6.31□□□□□ -1.4
TOPBP1-201ENST00000260810 C4orf19Q8IY42 314 aa6.31□□□□□ -1.4
TOPBP1-201ENST00000260810 CPXCR1Q8N123 301 aa6.31□□□□□ -1.4
TOPBP1-201ENST00000260810 SPTBN4Q9H254 2564 aa6.3□□□□□ -1.4
TOPBP1-201ENST00000260810 GJB6O95452 261 aa6.3□□□□□ -1.4
TOPBP1-201ENST00000260810 UNGP13051 313 aaPredicted RBP6.3□□□□□ -1.4
TOPBP1-201ENST00000260810 IVDP26440 423 aa6.3□□□□□ -1.4
TOPBP1-201ENST00000260810 ASPAP45381 313 aa6.3□□□□□ -1.4
TOPBP1-201ENST00000260810 CATIPQ7Z7H3 387 aa6.3□□□□□ -1.4
TOPBP1-201ENST00000260810 SLC20A1Q8WUM9 679 aa6.3□□□□□ -1.4
TOPBP1-201ENST00000260810 RMDN3Q96TC7 470 aa6.3□□□□□ -1.4
TOPBP1-201ENST00000260810 CPSF3Q9UKF6 684 aaKnown RBP6.3□□□□□ -1.4
TOPBP1-201ENST00000260810 UBR5O95071 2799 aaPredicted RBP6.3□□□□□ -1.4
TOPBP1-201ENST00000260810 CTIFO43310 598 aaKnown RBP6.3□□□□□ -1.4
TOPBP1-201ENST00000260810 LMOD1P29536 600 aaPredicted RBP6.3□□□□□ -1.4
TOPBP1-201ENST00000260810 CA5AP35218 305 aa6.3□□□□□ -1.4
TOPBP1-201ENST00000260810 ARSEP51690 589 aa6.3□□□□□ -1.4
TOPBP1-201ENST00000260810 RASIP1Q5U651 963 aa6.3□□□□□ -1.4
TOPBP1-201ENST00000260810 ZNF683Q8IZ20 524 aa6.3□□□□□ -1.4
TOPBP1-201ENST00000260810 SUPT20HQ8NEM7 779 aa6.3□□□□□ -1.4
TOPBP1-201ENST00000260810 ALG3Q92685 438 aa6.3□□□□□ -1.4
TOPBP1-201ENST00000260810 TMEM209Q96SK2 561 aa6.3□□□□□ -1.4
TOPBP1-201ENST00000260810 OSER1Q9NX31 292 aa6.3□□□□□ -1.4
TOPBP1-201ENST00000260810 PRPF6O94906 941 aaKnown RBP6.3□□□□□ -1.4
TOPBP1-201ENST00000260810 AARSP49588 968 aaKnown RBP eCLIP6.3□□□□□ -1.4
TOPBP1-201ENST00000260810 DYMQ7RTS9 669 aa6.3□□□□□ -1.4
TOPBP1-201ENST00000260810 TAS1R1Q7RTX1 841 aa6.3□□□□□ -1.4
TOPBP1-201ENST00000260810 ADAMTS19Q8TE59 1207 aa6.3□□□□□ -1.4
TOPBP1-201ENST00000260810 GOLGA2P5Q9HBQ8 144 aa6.3□□□□□ -1.4
TOPBP1-201ENST00000260810 GBA2Q9HCG7 927 aaPredicted RBP6.3□□□□□ -1.4
TOPBP1-201ENST00000260810 ERVK-5Q9HDB9 667 aa6.3□□□□□ -1.4
TOPBP1-201ENST00000260810 GNL3LQ9NVN8 582 aaKnown RBP6.3□□□□□ -1.4
TOPBP1-201ENST00000260810 TBX3O15119 743 aa6.3□□□□□ -1.4
TOPBP1-201ENST00000260810 CFBP00751 764 aa6.3□□□□□ -1.4
TOPBP1-201ENST00000260810 LONP1P36776 959 aaKnown RBP6.3□□□□□ -1.4
TOPBP1-201ENST00000260810 RBL2Q08999 1139 aa6.3□□□□□ -1.4
TOPBP1-201ENST00000260810 AGMOQ6ZNB7 445 aa6.3□□□□□ -1.4
TOPBP1-201ENST00000260810 SLC9A9Q8IVB4 645 aa6.3□□□□□ -1.4
TOPBP1-201ENST00000260810 TMTC2Q8N394 836 aa6.3□□□□□ -1.4
TOPBP1-201ENST00000260810 TTC9BQ8N6N2 239 aa6.3□□□□□ -1.4
TOPBP1-201ENST00000260810 NEUROG2Q9H2A3 272 aa6.3□□□□□ -1.4
TOPBP1-201ENST00000260810 RNF41Q9H4P4 317 aaPredicted RBP6.3□□□□□ -1.4
TOPBP1-201ENST00000260810 MTMR10Q9NXD2 777 aa6.3□□□□□ -1.4
TOPBP1-201ENST00000260810 NUB1Q9Y5A7 615 aa6.3□□□□□ -1.4
TOPBP1-201ENST00000260810 TECTAO75443 2155 aa6.29□□□□□ -1.4
TOPBP1-201ENST00000260810 DCAF8L1A6NGE4 600 aa6.29□□□□□ -1.4
TOPBP1-201ENST00000260810 NPHP1O15259 732 aa6.29□□□□□ -1.4
TOPBP1-201ENST00000260810 PLA2G4BP0C869 781 aa6.29□□□□□ -1.4
TOPBP1-201ENST00000260810 CSRP3P50461 194 aa6.29□□□□□ -1.4
TOPBP1-201ENST00000260810 ZNF467Q7Z7K2 595 aaPredicted RBP6.29□□□□□ -1.4
TOPBP1-201ENST00000260810 SLFN11Q7Z7L1 901 aa6.29□□□□□ -1.4
TOPBP1-201ENST00000260810 IQCA1Q86XH1 822 aa6.29□□□□□ -1.4
TOPBP1-201ENST00000260810 APOBEC3FQ8IUX4 373 aaKnown RBP6.29□□□□□ -1.4
TOPBP1-201ENST00000260810 SAMD3Q8N6K7 520 aa6.29□□□□□ -1.4
TOPBP1-201ENST00000260810 TEX13BQ9BXU2 312 aa6.29□□□□□ -1.4
TOPBP1-201ENST00000260810 AAASQ9NRG9 546 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms