RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 CNGA1P29973 690 aa9.87□□□□□ -0.83
CKAP2-201ENST00000258607 PLA2G4AP47712 749 aa9.87□□□□□ -0.83
CKAP2-201ENST00000258607 NPTX2P47972 431 aa9.87□□□□□ -0.83
CKAP2-201ENST00000258607 KCNJ1P48048 391 aa9.87□□□□□ -0.83
CKAP2-201ENST00000258607 FMO5P49326 533 aa9.87□□□□□ -0.83
CKAP2-201ENST00000258607 SLC47A2Q86VL8 602 aa9.87□□□□□ -0.83
CKAP2-201ENST00000258607 DEPTORQ8TB45 409 aa9.87□□□□□ -0.83
CKAP2-201ENST00000258607 CCDC51Q96ER9 411 aa9.87□□□□□ -0.83
CKAP2-201ENST00000258607 GLT8D2Q9H1C3 349 aa9.87□□□□□ -0.83
CKAP2-201ENST00000258607 AGO4Q9HCK5 861 aaKnown RBP9.87□□□□□ -0.83
CKAP2-201ENST00000258607 JPH1Q9HDC5 661 aaPredicted RBP9.87□□□□□ -0.83
CKAP2-201ENST00000258607 OGFRQ9NZT2 677 aa9.87□□□□□ -0.83
CKAP2-201ENST00000258607 AMACRQ9UHK6 382 aa9.87□□□□□ -0.83
CKAP2-201ENST00000258607 SPOPO43791 374 aa9.87□□□□□ -0.83
CKAP2-201ENST00000258607 CTNND1O60716 968 aaKnown RBP9.87□□□□□ -0.83
CKAP2-201ENST00000258607 CSPG5O95196 566 aa9.87□□□□□ -0.83
CKAP2-201ENST00000258607 SGPL1O95470 568 aa9.87□□□□□ -0.83
CKAP2-201ENST00000258607 SMARCA1P28370 1054 aa9.87□□□□□ -0.83
CKAP2-201ENST00000258607 MARCKSL1P49006 195 aa9.87□□□□□ -0.83
CKAP2-201ENST00000258607 SMTNP53814 917 aa9.87□□□□□ -0.83
CKAP2-201ENST00000258607 GALCP54803 685 aa9.87□□□□□ -0.83
CKAP2-201ENST00000258607 PHLDB3Q6NSJ2 640 aa9.87□□□□□ -0.83
CKAP2-201ENST00000258607 CCDC70Q6NSX1 233 aa9.87□□□□□ -0.83
CKAP2-201ENST00000258607 LRRN4Q8WUT4 740 aa9.87□□□□□ -0.83
CKAP2-201ENST00000258607 ARHGEF26Q96DR7 871 aa9.87□□□□□ -0.83
CKAP2-201ENST00000258607 ERGIC2Q96RQ1 377 aa9.87□□□□□ -0.83
CKAP2-201ENST00000258607 INTS2Q9H0H0 1204 aaKnown RBP9.87□□□□□ -0.83
CKAP2-201ENST00000258607 BTBD7Q9P203 1132 aa9.87□□□□□ -0.83
CKAP2-201ENST00000258607 ARAP2Q8WZ64 1704 aa9.87□□□□□ -0.83
CKAP2-201ENST00000258607 POLR2AP24928 1970 aaKnown RBP9.87□□□□□ -0.83
CKAP2-201ENST00000258607 A0A1W2PQC6 194 aa9.86□□□□□ -0.83
CKAP2-201ENST00000258607 LRRIQ3A6PVS8 624 aaPredicted RBP9.86□□□□□ -0.83
CKAP2-201ENST00000258607 WDR64B1ANS9 1081 aa9.86□□□□□ -0.83
CKAP2-201ENST00000258607 F5H423 210 aaPredicted RBP9.86□□□□□ -0.83
CKAP2-201ENST00000258607 ZBTB22O15209 634 aa9.86□□□□□ -0.83
CKAP2-201ENST00000258607 TBC1D8O95759 1140 aa9.86□□□□□ -0.83
CKAP2-201ENST00000258607 VAMP7P51809 220 aa9.86□□□□□ -0.83
CKAP2-201ENST00000258607 PPATQ06203 517 aa9.86□□□□□ -0.83
CKAP2-201ENST00000258607 EPHA7Q15375 998 aa9.86□□□□□ -0.83
CKAP2-201ENST00000258607 RPS6KA1Q15418 735 aa9.86□□□□□ -0.83
CKAP2-201ENST00000258607 HSDL1Q3SXM5 330 aa9.86□□□□□ -0.83
CKAP2-201ENST00000258607 KLHDC7AQ5VTJ3 777 aa9.86□□□□□ -0.83
CKAP2-201ENST00000258607 PRUNE1Q86TP1 453 aa9.86□□□□□ -0.83
CKAP2-201ENST00000258607 VPS36Q86VN1 386 aa9.86□□□□□ -0.83
CKAP2-201ENST00000258607 MCF2L2Q86YR7 1114 aa9.86□□□□□ -0.83
CKAP2-201ENST00000258607 RPUSD2Q8IZ73 545 aaKnown RBP9.86□□□□□ -0.83
CKAP2-201ENST00000258607 TEX13BQ9BXU2 312 aa9.86□□□□□ -0.83
CKAP2-201ENST00000258607 MAGEF1Q9HAY2 307 aa9.86□□□□□ -0.83
CKAP2-201ENST00000258607 GPRC5DQ9NZD1 345 aa9.86□□□□□ -0.83
CKAP2-201ENST00000258607 EIF3JO75822 258 aaKnown RBP9.86□□□□□ -0.83
CKAP2-201ENST00000258607 PIAS1O75925 651 aa9.86□□□□□ -0.83
CKAP2-201ENST00000258607 HEXIM1O94992 359 aaKnown RBP9.86□□□□□ -0.83
CKAP2-201ENST00000258607 MYL1P05976 194 aa9.86□□□□□ -0.83
CKAP2-201ENST00000258607 H2AFZP0C0S5 128 aa9.86□□□□□ -0.83
CKAP2-201ENST00000258607 ZNF286BP0CG31 522 aa9.86□□□□□ -0.83
CKAP2-201ENST00000258607 CARSP49589 748 aaKnown RBP9.86□□□□□ -0.83
CKAP2-201ENST00000258607 H2AFVQ71UI9 128 aa9.86□□□□□ -0.83
CKAP2-201ENST00000258607 MTERF4Q7Z6M4 381 aaKnown RBP9.86□□□□□ -0.83
CKAP2-201ENST00000258607 GPR161Q8N6U8 529 aaKnown RBP9.86□□□□□ -0.83
CKAP2-201ENST00000258607 NSUN6Q8TEA1 469 aaKnown RBP9.86□□□□□ -0.83
CKAP2-201ENST00000258607 TRIM51Q9BSJ1 452 aa9.86□□□□□ -0.83
CKAP2-201ENST00000258607 TXNRD2Q9NNW7 524 aa9.86□□□□□ -0.83
CKAP2-201ENST00000258607 PCDHA10Q9Y5I2 948 aa9.86□□□□□ -0.83
CKAP2-201ENST00000258607 IGSF9BQ9UPX0 1349 aa9.86□□□□□ -0.83
CKAP2-201ENST00000258607 THSD7AQ9UPZ6 1657 aa9.86□□□□□ -0.83
CKAP2-201ENST00000258607 ERLIN1O75477 346 aa9.86□□□□□ -0.83
CKAP2-201ENST00000258607 KRT14P02533 472 aa9.86□□□□□ -0.83
CKAP2-201ENST00000258607 WEE2P0C1S8 567 aa9.86□□□□□ -0.83
CKAP2-201ENST00000258607 SLCO1A2P46721 670 aa9.86□□□□□ -0.83
CKAP2-201ENST00000258607 CASP8Q14790 479 aa9.86□□□□□ -0.83
CKAP2-201ENST00000258607 SNRNP35Q16560 246 aaKnown RBP9.86□□□□□ -0.83
CKAP2-201ENST00000258607 Q4G0T1 1027 aa9.86□□□□□ -0.83
CKAP2-201ENST00000258607 RNF149Q8NC42 400 aa9.86□□□□□ -0.83
CKAP2-201ENST00000258607 TTYH3Q9C0H2 523 aa9.86□□□□□ -0.83
CKAP2-201ENST00000258607 CEP72Q9P209 647 aa9.86□□□□□ -0.83
CKAP2-201ENST00000258607 SLC9A2Q9UBY0 812 aa9.86□□□□□ -0.83
CKAP2-201ENST00000258607 FBXO40Q9UH90 709 aa9.86□□□□□ -0.83
CKAP2-201ENST00000258607 PCDHA2Q9Y5H9 948 aa9.86□□□□□ -0.83
CKAP2-201ENST00000258607 ADGRA3Q8IWK6 1321 aa9.86□□□□□ -0.83
CKAP2-201ENST00000258607 C5orf42Q9H799 3197 aa9.85□□□□□ -0.83
CKAP2-201ENST00000258607 SPDYE16A6NNV3 312 aaPredicted RBP9.85□□□□□ -0.83
CKAP2-201ENST00000258607 EIF3CLB5ME19 914 aaKnown RBP9.85□□□□□ -0.83
CKAP2-201ENST00000258607 GOLGA8SH3BPF8 625 aa9.85□□□□□ -0.83
CKAP2-201ENST00000258607 K7ERI5 159 aa9.85□□□□□ -0.83
CKAP2-201ENST00000258607 FTLP02792 175 aaPredicted RBP9.85□□□□□ -0.83
CKAP2-201ENST00000258607 SERPING1P05155 500 aa9.85□□□□□ -0.83
CKAP2-201ENST00000258607 MMEP08473 750 aa9.85□□□□□ -0.83
CKAP2-201ENST00000258607 CCND2P30279 289 aa9.85□□□□□ -0.83
CKAP2-201ENST00000258607 BFSP1Q12934 665 aa9.85□□□□□ -0.83
CKAP2-201ENST00000258607 AMHR2Q16671 573 aa9.85□□□□□ -0.83
CKAP2-201ENST00000258607 ODF2Q5BJF6 829 aa9.85□□□□□ -0.83
CKAP2-201ENST00000258607 TAX1BP1Q86VP1 789 aa9.85□□□□□ -0.83
CKAP2-201ENST00000258607 RNF169Q8NCN4 708 aa9.85□□□□□ -0.83
CKAP2-201ENST00000258607 SPATA4Q8NEY3 305 aa9.85□□□□□ -0.83
CKAP2-201ENST00000258607 TRIM58Q8NG06 486 aa9.85□□□□□ -0.83
CKAP2-201ENST00000258607 EIF3CQ99613 913 aaKnown RBP9.85□□□□□ -0.83
CKAP2-201ENST00000258607 PORCNQ9H237 461 aa9.85□□□□□ -0.83
CKAP2-201ENST00000258607 ACAD9Q9H845 621 aa9.85□□□□□ -0.83
CKAP2-201ENST00000258607 NR2E1Q9Y466 385 aa9.85□□□□□ -0.83
CKAP2-201ENST00000258607 PI4K2BG5E9Z4 385 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms