RNA–Protein interactions for RNA: ENST00000254719.9

RPA1-201, Transcript of replication protein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA1, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-201ENST00000254719 AMNQ9BXJ7 453 aa9.98□□□□□ -0.81
RPA1-201ENST00000254719 SYNPO2Q9UMS6 1093 aa9.98□□□□□ -0.81
RPA1-201ENST00000254719 TCP10L2B9ZVM9 353 aa9.98□□□□□ -0.81
RPA1-201ENST00000254719 EBAG9O00559 213 aa9.98□□□□□ -0.81
RPA1-201ENST00000254719 PDXKO00764 312 aa9.98□□□□□ -0.81
RPA1-201ENST00000254719 ZNF862O60290 1169 aa9.98□□□□□ -0.81
RPA1-201ENST00000254719 NR2F2P24468 414 aa9.98□□□□□ -0.81
RPA1-201ENST00000254719 SP2Q02086 613 aa9.98□□□□□ -0.81
RPA1-201ENST00000254719 PPFIA1Q13136 1202 aa9.98□□□□□ -0.81
RPA1-201ENST00000254719 PAK2Q13177 524 aa9.98□□□□□ -0.81
RPA1-201ENST00000254719 BYSLQ13895 437 aaKnown RBP9.98□□□□□ -0.81
RPA1-201ENST00000254719 TTC31Q49AM3 519 aaPredicted RBP9.98□□□□□ -0.81
RPA1-201ENST00000254719 CC2D2BQ6DHV5 1058 aa9.98□□□□□ -0.81
RPA1-201ENST00000254719 C8orf74Q6P047 294 aa9.98□□□□□ -0.81
RPA1-201ENST00000254719 FAM184BQ9ULE4 1060 aa9.98□□□□□ -0.81
RPA1-201ENST00000254719 ADAMTS5Q9UNA0 930 aa9.98□□□□□ -0.81
RPA1-201ENST00000254719 BZW2Q9Y6E2 419 aaKnown RBP9.98□□□□□ -0.81
RPA1-201ENST00000254719 RAD17O75943 681 aa9.98□□□□□ -0.81
RPA1-201ENST00000254719 MARCKSL1P49006 195 aa9.98□□□□□ -0.81
RPA1-201ENST00000254719 RBM26Q5T8P6 1007 aaKnown RBP9.98□□□□□ -0.81
RPA1-201ENST00000254719 MTUS1Q9ULD2 1270 aa9.98□□□□□ -0.81
RPA1-201ENST00000254719 TCRBV7S2A1N4TA0A589 114 aa9.97□□□□□ -0.81
RPA1-201ENST00000254719 NR3C1P04150 777 aa9.97□□□□□ -0.81
RPA1-201ENST00000254719 SERPING1P05155 500 aa9.97□□□□□ -0.81
RPA1-201ENST00000254719 RAPGEF1Q13905 1077 aa9.97□□□□□ -0.81
RPA1-201ENST00000254719 PTPROQ16827 1216 aa9.97□□□□□ -0.81
RPA1-201ENST00000254719 FBXO11Q86XK2 927 aa9.97□□□□□ -0.81
RPA1-201ENST00000254719 AFAP1L1Q8TED9 768 aa9.97□□□□□ -0.81
RPA1-201ENST00000254719 DYDC1Q8WWB3 177 aa9.97□□□□□ -0.81
RPA1-201ENST00000254719 CAVIN3Q969G5 261 aa9.97□□□□□ -0.81
RPA1-201ENST00000254719 KREMEN1Q96MU8 473 aa9.97□□□□□ -0.81
RPA1-201ENST00000254719 CCDC77Q9BR77 488 aa9.97□□□□□ -0.81
RPA1-201ENST00000254719 AGPAT3Q9NRZ7 376 aa9.97□□□□□ -0.81
RPA1-201ENST00000254719 MTRF1LQ9UGC7 380 aaKnown RBP9.97□□□□□ -0.81
RPA1-201ENST00000254719 NOCTQ9UK39 431 aaKnown RBP9.97□□□□□ -0.81
RPA1-201ENST00000254719 HYOU1Q9Y4L1 999 aa9.97□□□□□ -0.81
RPA1-201ENST00000254719 TRIP11Q15643 1979 aa9.97□□□□□ -0.81
RPA1-201ENST00000254719 TTLL13PA6NNM8 815 aa9.97□□□□□ -0.81
RPA1-201ENST00000254719 ADRB2P07550 413 aa9.97□□□□□ -0.81
RPA1-201ENST00000254719 CFHP08603 1231 aa9.97□□□□□ -0.81
RPA1-201ENST00000254719 SOX10P56693 466 aa9.97□□□□□ -0.81
RPA1-201ENST00000254719 EN1Q05925 392 aaPredicted RBP9.97□□□□□ -0.81
RPA1-201ENST00000254719 SLC20A1Q8WUM9 679 aa9.97□□□□□ -0.81
RPA1-201ENST00000254719 FAM20AQ96MK3 541 aa9.97□□□□□ -0.81
RPA1-201ENST00000254719 PSMD1Q99460 953 aa9.97□□□□□ -0.81
RPA1-201ENST00000254719 NSRP1Q9H0G5 558 aaKnown RBP9.97□□□□□ -0.81
RPA1-201ENST00000254719 CHORDC1Q9UHD1 332 aaPredicted RBP9.97□□□□□ -0.81
RPA1-201ENST00000254719 EXOC7Q9UPT5 735 aa9.97□□□□□ -0.81
RPA1-201ENST00000254719 ATP8B3O60423 1300 aa9.97□□□□□ -0.81
RPA1-201ENST00000254719 ACTN2P35609 894 aa9.97□□□□□ -0.81
RPA1-201ENST00000254719 DNA2P51530 1060 aa9.97□□□□□ -0.81
RPA1-201ENST00000254719 EPC2Q52LR7 807 aa9.97□□□□□ -0.81
RPA1-201ENST00000254719 TPCN2Q8NHX9 752 aa9.97□□□□□ -0.81
RPA1-201ENST00000254719 CHURC1Q8WUH1 139 aa9.97□□□□□ -0.81
RPA1-201ENST00000254719 FAM151AQ8WW52 585 aa9.97□□□□□ -0.81
RPA1-201ENST00000254719 GPRC5CQ9NQ84 441 aa9.97□□□□□ -0.81
RPA1-201ENST00000254719 UBIAD1Q9Y5Z9 338 aa9.97□□□□□ -0.81
RPA1-201ENST00000254719 RAD51CO43502 376 aa9.96□□□□□ -0.81
RPA1-201ENST00000254719 FAM189A1O60320 539 aa9.96□□□□□ -0.81
RPA1-201ENST00000254719 MNAT1P51948 309 aa9.96□□□□□ -0.81
RPA1-201ENST00000254719 PRPF4BQ13523 1007 aaKnown RBP9.96□□□□□ -0.81
RPA1-201ENST00000254719 PPP4R3CPQ6ZMV5 832 aa9.96□□□□□ -0.81
RPA1-201ENST00000254719 ZNF516Q92618 1163 aa9.96□□□□□ -0.81
RPA1-201ENST00000254719 KRT14P02533 472 aa9.96□□□□□ -0.81
RPA1-201ENST00000254719 NEFHP12036 1026 aa9.96□□□□□ -0.81
RPA1-201ENST00000254719 PEX5P50542 639 aa9.96□□□□□ -0.81
RPA1-201ENST00000254719 KLHL30Q0D2K2 578 aa9.96□□□□□ -0.81
RPA1-201ENST00000254719 RUFY4Q6ZNE9 571 aa9.96□□□□□ -0.81
RPA1-201ENST00000254719 ANO5Q75V66 913 aa9.96□□□□□ -0.81
RPA1-201ENST00000254719 B4GALNT4Q76KP1 1039 aa9.96□□□□□ -0.81
RPA1-201ENST00000254719 DDX42Q86XP3 938 aaKnown RBP eCLIP9.96□□□□□ -0.81
RPA1-201ENST00000254719 METTL13Q8N6R0 699 aa9.96□□□□□ -0.81
RPA1-201ENST00000254719 HOOK2Q96ED9 719 aa9.96□□□□□ -0.81
RPA1-201ENST00000254719 CBWD1Q9BRT8 395 aa9.96□□□□□ -0.81
RPA1-201ENST00000254719 ADAM7Q9H2U9 754 aa9.96□□□□□ -0.81
RPA1-201ENST00000254719 FAM204AQ9H8W3 233 aa9.96□□□□□ -0.81
RPA1-201ENST00000254719 ZDHHC18Q9NUE0 388 aa9.96□□□□□ -0.81
RPA1-201ENST00000254719 PLXNA1Q9UIW2 1896 aa9.96□□□□□ -0.82
RPA1-201ENST00000254719 TRIM49P0CI25 452 aa9.96□□□□□ -0.82
RPA1-201ENST00000254719 TRIM49CP0CI26 452 aa9.96□□□□□ -0.82
RPA1-201ENST00000254719 CXCL9Q07325 125 aa9.96□□□□□ -0.82
RPA1-201ENST00000254719 TAX1BP1Q86VP1 789 aa9.96□□□□□ -0.82
RPA1-201ENST00000254719 USP38Q8NB14 1042 aa9.96□□□□□ -0.82
RPA1-201ENST00000254719 VCPKMTQ9H867 229 aa9.96□□□□□ -0.82
RPA1-201ENST00000254719 ZHX2Q9Y6X8 837 aa9.96□□□□□ -0.82
RPA1-201ENST00000254719 ANKRD63C9JTQ0 380 aa9.96□□□□□ -0.82
RPA1-201ENST00000254719 SLC26A4O43511 780 aa9.96□□□□□ -0.82
RPA1-201ENST00000254719 CCT5P48643 541 aa9.96□□□□□ -0.82
RPA1-201ENST00000254719 MTMR3Q13615 1198 aa9.96□□□□□ -0.82
RPA1-201ENST00000254719 ZIM3Q96PE6 472 aa9.96□□□□□ -0.82
RPA1-201ENST00000254719 MTFR1LQ9H019 292 aa9.96□□□□□ -0.82
RPA1-201ENST00000254719 KCNH7Q9NS40 1196 aa9.96□□□□□ -0.82
RPA1-201ENST00000254719 PDCD11Q14690 1871 aaKnown RBP9.95□□□□□ -0.82
RPA1-201ENST00000254719 GSTTP1A0A1W2PQM5 241 aa9.95□□□□□ -0.82
RPA1-201ENST00000254719 COPB2P35606 906 aa9.95□□□□□ -0.82
RPA1-201ENST00000254719 MAP2K1Q02750 393 aaPredicted RBP9.95□□□□□ -0.82
RPA1-201ENST00000254719 TTC27Q6P3X3 843 aa9.95□□□□□ -0.82
RPA1-201ENST00000254719 SLC9A9Q8IVB4 645 aa9.95□□□□□ -0.82
RPA1-201ENST00000254719 KIFAP3Q92845 792 aa9.95□□□□□ -0.82
RPA1-201ENST00000254719 EXOC4Q96A65 974 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms