RNA–Protein interactions for RNA: ENST00000253363.10

RBM39-201, Transcript of RNA binding motif protein 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RBM39, Length 2,488 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-201ENST00000253363 DGKGP49619 791 aa4.21□□□□□ -1.73
RBM39-201ENST00000253363 ITKQ08881 620 aa4.21□□□□□ -1.73
RBM39-201ENST00000253363 RAPGEF1Q13905 1077 aa4.21□□□□□ -1.73
RBM39-201ENST00000253363 LAPTM4AQ15012 233 aa4.21□□□□□ -1.73
RBM39-201ENST00000253363 NFE2Q16621 373 aaPredicted RBP4.21□□□□□ -1.73
RBM39-201ENST00000253363 DENND5AQ6IQ26 1287 aa4.21□□□□□ -1.73
RBM39-201ENST00000253363 PRRT2Q7Z6L0 340 aaPredicted RBP4.21□□□□□ -1.73
RBM39-201ENST00000253363 CDH24Q86UP0 819 aa4.21□□□□□ -1.73
RBM39-201ENST00000253363 SMYD4Q8IYR2 804 aaPredicted RBP4.21□□□□□ -1.73
RBM39-201ENST00000253363 PPM1EQ8WY54 764 aa4.21□□□□□ -1.73
RBM39-201ENST00000253363 NSUN4Q96CB9 384 aaKnown RBP4.21□□□□□ -1.73
RBM39-201ENST00000253363 OPTNQ96CV9 577 aa4.21□□□□□ -1.73
RBM39-201ENST00000253363 WRNIP1Q96S55 665 aa4.21□□□□□ -1.73
RBM39-201ENST00000253363 SEZ6LQ9BYH1 1024 aa4.21□□□□□ -1.73
RBM39-201ENST00000253363 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.21□□□□□ -1.73
RBM39-201ENST00000253363 SSU72Q9NP77 194 aaKnown RBP4.21□□□□□ -1.73
RBM39-201ENST00000253363 ZBTB40Q9NUA8 1239 aa4.21□□□□□ -1.73
RBM39-201ENST00000253363 ZIM2Q9NZV7 527 aa4.21□□□□□ -1.73
RBM39-201ENST00000253363 HMG20BQ9P0W2 317 aa4.21□□□□□ -1.73
RBM39-201ENST00000253363 WHRNQ9P202 907 aa4.21□□□□□ -1.73
RBM39-201ENST00000253363 PI4KBQ9UBF8 816 aa4.21□□□□□ -1.73
RBM39-201ENST00000253363 NOL7Q9UMY1 257 aaKnown RBP4.21□□□□□ -1.73
RBM39-201ENST00000253363 ZMYM6O95789 1325 aa4.21□□□□□ -1.73
RBM39-201ENST00000253363 ROBO3Q96MS0 1386 aa4.21□□□□□ -1.73
RBM39-201ENST00000253363 CCL15-CCL14A0A0B4J2E2 113 aa4.21□□□□□ -1.74
RBM39-201ENST00000253363 MEIS1O00470 390 aa4.21□□□□□ -1.74
RBM39-201ENST00000253363 PRPF3O43395 683 aaKnown RBP4.21□□□□□ -1.74
RBM39-201ENST00000253363 OIP5O43482 229 aa4.21□□□□□ -1.74
RBM39-201ENST00000253363 SURF6O75683 361 aaKnown RBP4.21□□□□□ -1.74
RBM39-201ENST00000253363 GLRX3O76003 335 aaKnown RBP4.21□□□□□ -1.74
RBM39-201ENST00000253363 ALX3O95076 343 aa4.21□□□□□ -1.74
RBM39-201ENST00000253363 KRT18P05783 430 aaKnown RBP4.21□□□□□ -1.74
RBM39-201ENST00000253363 PCP11498 1178 aaKnown RBP4.21□□□□□ -1.74
RBM39-201ENST00000253363 RAB6AP20340 208 aa4.21□□□□□ -1.74
RBM39-201ENST00000253363 SUMO1P63165 101 aaKnown RBP4.21□□□□□ -1.74
RBM39-201ENST00000253363 SOX4Q06945 474 aaPredicted RBP4.21□□□□□ -1.74
RBM39-201ENST00000253363 VGLL4Q14135 290 aa4.21□□□□□ -1.74
RBM39-201ENST00000253363 STAT4Q14765 748 aa4.21□□□□□ -1.74
RBM39-201ENST00000253363 UBE3CQ15386 1083 aa4.21□□□□□ -1.74
RBM39-201ENST00000253363 CCL15Q16663 113 aa4.21□□□□□ -1.74
RBM39-201ENST00000253363 TRIM59Q8IWR1 403 aa4.21□□□□□ -1.74
RBM39-201ENST00000253363 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.21□□□□□ -1.74
RBM39-201ENST00000253363 TEX11Q8IYF3 940 aa4.21□□□□□ -1.74
RBM39-201ENST00000253363 DNAJB8Q8NHS0 232 aa4.21□□□□□ -1.74
RBM39-201ENST00000253363 SOCS4Q8WXH5 440 aa4.21□□□□□ -1.74
RBM39-201ENST00000253363 DDX1Q92499 740 aaKnown RBP4.21□□□□□ -1.74
RBM39-201ENST00000253363 VWCEQ96DN2 955 aa4.21□□□□□ -1.74
RBM39-201ENST00000253363 TRIM44Q96DX7 344 aaPredicted RBP4.21□□□□□ -1.74
RBM39-201ENST00000253363 C1orf159Q96HA4 380 aa4.21□□□□□ -1.74
RBM39-201ENST00000253363 CCDC17Q96LX7 622 aa4.21□□□□□ -1.74
RBM39-201ENST00000253363 MIPEPQ99797 713 aa4.21□□□□□ -1.74
RBM39-201ENST00000253363 MCOLN1Q9GZU1 580 aa4.21□□□□□ -1.74
RBM39-201ENST00000253363 TDRD3Q9H7E2 651 aaKnown RBP4.21□□□□□ -1.74
RBM39-201ENST00000253363 PIDD1Q9HB75 910 aa4.21□□□□□ -1.74
RBM39-201ENST00000253363 ATP8A2Q9NTI2 1148 aa4.21□□□□□ -1.74
RBM39-201ENST00000253363 RAI14Q9P0K7 980 aa4.21□□□□□ -1.74
RBM39-201ENST00000253363 AGTPBP1Q9UPW5 1226 aa4.21□□□□□ -1.74
RBM39-201ENST00000253363 EMC9Q9Y3B6 208 aa4.21□□□□□ -1.74
RBM39-201ENST00000253363 A0A0G2JMZ2 1700 aa4.21□□□□□ -1.74
RBM39-201ENST00000253363 CASP8AP2Q9UKL3 1982 aa4.21□□□□□ -1.74
RBM39-201ENST00000253363 CCDC163A0A0D9SF12 145 aa4.2□□□□□ -1.74
RBM39-201ENST00000253363 CLRN2A0PK11 232 aa4.2□□□□□ -1.74
RBM39-201ENST00000253363 UBE2Q2LH0YL09 131 aa4.2□□□□□ -1.74
RBM39-201ENST00000253363 NEMP1O14524 444 aa4.2□□□□□ -1.74
RBM39-201ENST00000253363 SLC26A4O43511 780 aa4.2□□□□□ -1.74
RBM39-201ENST00000253363 TLR2O60603 784 aa4.2□□□□□ -1.74
RBM39-201ENST00000253363 PPM1BO75688 479 aa4.2□□□□□ -1.74
RBM39-201ENST00000253363 SLITRK5O94991 958 aa4.2□□□□□ -1.74
RBM39-201ENST00000253363 TIAF1O95411 115 aa4.2□□□□□ -1.74
RBM39-201ENST00000253363 CRTAMO95727 393 aa4.2□□□□□ -1.74
RBM39-201ENST00000253363 CST3P01034 146 aaPredicted RBP4.2□□□□□ -1.74
RBM39-201ENST00000253363 COL6A1P12109 1028 aa4.2□□□□□ -1.74
RBM39-201ENST00000253363 TRAPPC10P48553 1259 aa4.2□□□□□ -1.74
RBM39-201ENST00000253363 RGS3P49796 1198 aa4.2□□□□□ -1.74
RBM39-201ENST00000253363 ZNF143P52747 638 aaPredicted RBP4.2□□□□□ -1.74
RBM39-201ENST00000253363 UBXN2AP68543 259 aa4.2□□□□□ -1.74
RBM39-201ENST00000253363 CCNA1P78396 465 aa4.2□□□□□ -1.74
RBM39-201ENST00000253363 SP3Q02447 781 aa4.2□□□□□ -1.74
RBM39-201ENST00000253363 MECOMQ03112 1051 aa4.2□□□□□ -1.74
RBM39-201ENST00000253363 DPY19L1Q2PZI1 675 aa4.2□□□□□ -1.74
RBM39-201ENST00000253363 CCDC92Q53HC0 331 aaPredicted RBP4.2□□□□□ -1.74
RBM39-201ENST00000253363 INO80DQ53TQ3 878 aaPredicted RBP4.2□□□□□ -1.74
RBM39-201ENST00000253363 TRIM61Q5EBN2 209 aa4.2□□□□□ -1.74
RBM39-201ENST00000253363 ZC3H12BQ5HYM0 836 aaKnown RBP4.2□□□□□ -1.74
RBM39-201ENST00000253363 GTF2IRD2BQ6EKJ0 949 aa4.2□□□□□ -1.74
RBM39-201ENST00000253363 KCNT2Q6UVM3 1135 aa4.2□□□□□ -1.74
RBM39-201ENST00000253363 LBX2Q6XYB7 198 aa4.2□□□□□ -1.74
RBM39-201ENST00000253363 GTF2IRD2Q86UP8 949 aa4.2□□□□□ -1.74
RBM39-201ENST00000253363 FMR1NBQ8N0W7 255 aaPredicted RBP4.2□□□□□ -1.74
RBM39-201ENST00000253363 FIBCD1Q8N539 461 aa4.2□□□□□ -1.74
RBM39-201ENST00000253363 SAMD3Q8N6K7 520 aa4.2□□□□□ -1.74
RBM39-201ENST00000253363 MB21D1Q8N884 522 aa4.2□□□□□ -1.74
RBM39-201ENST00000253363 CCDC89Q8N998 374 aa4.2□□□□□ -1.74
RBM39-201ENST00000253363 C2CD4AQ8NCU7 369 aaPredicted RBP4.2□□□□□ -1.74
RBM39-201ENST00000253363 GSTCDQ8NEC7 633 aa4.2□□□□□ -1.74
RBM39-201ENST00000253363 LPAR1Q92633 364 aa4.2□□□□□ -1.74
RBM39-201ENST00000253363 TRIM11Q96F44 468 aa4.2□□□□□ -1.74
RBM39-201ENST00000253363 KREMEN1Q96MU8 473 aa4.2□□□□□ -1.74
RBM39-201ENST00000253363 PLIN4Q96Q06 1357 aa4.2□□□□□ -1.74
RBM39-201ENST00000253363 MRPL4Q9BYD3 311 aaKnown RBP4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms