RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 TBC1D10BQ4KMP7 808 aaPredicted RBP21.19■□□□□ 0.98
CDC42EP1-201ENST00000249014 TTMPQ5BVD1 217 aa21.19■□□□□ 0.98
CDC42EP1-201ENST00000249014 CIAPIN1Q6FI81 312 aa21.19■□□□□ 0.98
CDC42EP1-201ENST00000249014 HAUS6Q7Z4H7 955 aa21.19■□□□□ 0.98
CDC42EP1-201ENST00000249014 TMEM174Q8WUU8 243 aa21.19■□□□□ 0.98
CDC42EP1-201ENST00000249014 ARHGEF26Q96DR7 871 aa21.19■□□□□ 0.98
CDC42EP1-201ENST00000249014 CALR3Q96L12 384 aaKnown RBP21.19■□□□□ 0.98
CDC42EP1-201ENST00000249014 CCDC43Q96MW1 224 aaKnown RBP21.19■□□□□ 0.98
CDC42EP1-201ENST00000249014 TBC1D22BQ9NU19 505 aa21.19■□□□□ 0.98
CDC42EP1-201ENST00000249014 PARP14Q460N5 1801 aa21.19■□□□□ 0.98
CDC42EP1-201ENST00000249014 GOLGA8KD6RF30 607 aa21.19■□□□□ 0.98
CDC42EP1-201ENST00000249014 OPA1O60313 960 aa21.19■□□□□ 0.98
CDC42EP1-201ENST00000249014 MYCLP12524 364 aaPredicted RBP21.19■□□□□ 0.98
CDC42EP1-201ENST00000249014 VCAM1P19320 739 aa21.19■□□□□ 0.98
CDC42EP1-201ENST00000249014 TNFAIP3P21580 790 aa21.19■□□□□ 0.98
CDC42EP1-201ENST00000249014 GCLMP48507 274 aa21.19■□□□□ 0.98
CDC42EP1-201ENST00000249014 GTF2BQ00403 316 aa21.19■□□□□ 0.98
CDC42EP1-201ENST00000249014 PPATQ06203 517 aa21.19■□□□□ 0.98
CDC42EP1-201ENST00000249014 KCTD19Q17RG1 926 aaPredicted RBP21.19■□□□□ 0.98
CDC42EP1-201ENST00000249014 C12orf56Q8IXR9 622 aa21.19■□□□□ 0.98
CDC42EP1-201ENST00000249014 IQCKQ8N0W5 287 aa21.19■□□□□ 0.98
CDC42EP1-201ENST00000249014 PIK3R5Q8WYR1 880 aa21.19■□□□□ 0.98
CDC42EP1-201ENST00000249014 DDX47Q9H0S4 455 aaKnown RBP21.19■□□□□ 0.98
CDC42EP1-201ENST00000249014 THAP2Q9H0W7 228 aa21.19■□□□□ 0.98
CDC42EP1-201ENST00000249014 UBE2TQ9NPD8 197 aaPredicted RBP21.19■□□□□ 0.98
CDC42EP1-201ENST00000249014 HSPBP1Q9NZL4 362 aa21.19■□□□□ 0.98
CDC42EP1-201ENST00000249014 PPP1R9AQ9ULJ8 1098 aa21.19■□□□□ 0.98
CDC42EP1-201ENST00000249014 WDR81Q562E7 1941 aa21.18■□□□□ 0.98
CDC42EP1-201ENST00000249014 SART1O43290 800 aaKnown RBP21.18■□□□□ 0.98
CDC42EP1-201ENST00000249014 CCNE2O96020 404 aa21.18■□□□□ 0.98
CDC42EP1-201ENST00000249014 CCDC172P0C7W6 258 aa21.18■□□□□ 0.98
CDC42EP1-201ENST00000249014 ITGA4P13612 1032 aa21.18■□□□□ 0.98
CDC42EP1-201ENST00000249014 MTMR2Q13614 643 aa21.18■□□□□ 0.98
CDC42EP1-201ENST00000249014 MREGQ8N565 214 aa21.18■□□□□ 0.98
CDC42EP1-201ENST00000249014 SLC20A1Q8WUM9 679 aa21.18■□□□□ 0.98
CDC42EP1-201ENST00000249014 CTNNBL1Q8WYA6 563 aaPredicted RBP21.18■□□□□ 0.98
CDC42EP1-201ENST00000249014 SEPT11Q9NVA2 429 aaKnown RBP21.18■□□□□ 0.98
CDC42EP1-201ENST00000249014 SLC16A4O15374 487 aa21.17■□□□□ 0.98
CDC42EP1-201ENST00000249014 KRT14P02533 472 aa21.17■□□□□ 0.98
CDC42EP1-201ENST00000249014 RFX1P22670 979 aa21.17■□□□□ 0.98
CDC42EP1-201ENST00000249014 ECHS1P30084 290 aa21.17■□□□□ 0.98
CDC42EP1-201ENST00000249014 PEX3P56589 373 aa21.17■□□□□ 0.98
CDC42EP1-201ENST00000249014 PPFIA1Q13136 1202 aa21.17■□□□□ 0.98
CDC42EP1-201ENST00000249014 EPC2Q52LR7 807 aa21.17■□□□□ 0.98
CDC42EP1-201ENST00000249014 PLA2G4FQ68DD2 849 aa21.17■□□□□ 0.98
CDC42EP1-201ENST00000249014 C4orf19Q8IY42 314 aa21.17■□□□□ 0.98
CDC42EP1-201ENST00000249014 XXYLT1Q8NBI6 393 aa21.17■□□□□ 0.98
CDC42EP1-201ENST00000249014 WNK4Q96J92 1243 aa21.17■□□□□ 0.98
CDC42EP1-201ENST00000249014 RUFY1Q96T51 708 aa21.17■□□□□ 0.98
CDC42EP1-201ENST00000249014 AMFRQ9UKV5 643 aa21.17■□□□□ 0.98
CDC42EP1-201ENST00000249014 DAAM1Q9Y4D1 1078 aa21.17■□□□□ 0.98
CDC42EP1-201ENST00000249014 KRIT1O00522 736 aa21.17■□□□□ 0.98
CDC42EP1-201ENST00000249014 SHOX2O60902 331 aaPredicted RBP21.17■□□□□ 0.98
CDC42EP1-201ENST00000249014 FMNL3Q8IVF7 1028 aa21.17■□□□□ 0.98
CDC42EP1-201ENST00000249014 RMDN3Q96TC7 470 aa21.17■□□□□ 0.98
CDC42EP1-201ENST00000249014 AGPAT1Q99943 283 aa21.17■□□□□ 0.98
CDC42EP1-201ENST00000249014 PDCD2LQ9BRP1 358 aa21.17■□□□□ 0.98
CDC42EP1-201ENST00000249014 ISCUQ9H1K1 167 aa21.17■□□□□ 0.98
CDC42EP1-201ENST00000249014 TAF1DQ9H5J8 278 aaPredicted RBP21.17■□□□□ 0.98
CDC42EP1-201ENST00000249014 MAP3K20Q9NYL2 800 aaKnown RBP21.17■□□□□ 0.98
CDC42EP1-201ENST00000249014 COG5Q9UP83 839 aa21.17■□□□□ 0.98
CDC42EP1-201ENST00000249014 ZNF233A6NK53 670 aa21.16■□□□□ 0.98
CDC42EP1-201ENST00000249014 DCAF12L1Q5VU92 463 aa21.16■□□□□ 0.98
CDC42EP1-201ENST00000249014 WHAMMQ8TF30 809 aa21.16■□□□□ 0.98
CDC42EP1-201ENST00000249014 TRERF1Q96PN7 1200 aa21.16■□□□□ 0.98
CDC42EP1-201ENST00000249014 ST6GALNAC4Q9H4F1 302 aa21.16■□□□□ 0.98
CDC42EP1-201ENST00000249014 PXMP2Q9NR77 195 aa21.16■□□□□ 0.98
CDC42EP1-201ENST00000249014 CWC15Q9P013 229 aaKnown RBP21.16■□□□□ 0.98
CDC42EP1-201ENST00000249014 BHMG1C9JSJ3 638 aaPredicted RBP21.16■□□□□ 0.98
CDC42EP1-201ENST00000249014 DDX3YO15523 660 aaKnown RBP21.16■□□□□ 0.98
CDC42EP1-201ENST00000249014 CTNND1O60716 968 aaKnown RBP21.16■□□□□ 0.98
CDC42EP1-201ENST00000249014 IVLP07476 585 aa21.16■□□□□ 0.98
CDC42EP1-201ENST00000249014 NCKAP1LP55160 1127 aa21.16■□□□□ 0.98
CDC42EP1-201ENST00000249014 CFAP58Q5T655 872 aa21.16■□□□□ 0.98
CDC42EP1-201ENST00000249014 RNF207Q6ZRF8 634 aa21.16■□□□□ 0.98
CDC42EP1-201ENST00000249014 DDX42Q86XP3 938 aaKnown RBP eCLIP21.16■□□□□ 0.98
CDC42EP1-201ENST00000249014 KAT5Q92993 513 aa21.16■□□□□ 0.98
CDC42EP1-201ENST00000249014 RPAP3Q9H6T3 665 aaPredicted RBP21.16■□□□□ 0.98
CDC42EP1-201ENST00000249014 ANKRD62A6NC57 917 aa21.15■□□□□ 0.98
CDC42EP1-201ENST00000249014 GOLGA8IPA6NC78 632 aa21.15■□□□□ 0.98
CDC42EP1-201ENST00000249014 GOLGA8JA6NMD2 632 aa21.15■□□□□ 0.98
CDC42EP1-201ENST00000249014 ADRB2P07550 413 aa21.15■□□□□ 0.98
CDC42EP1-201ENST00000249014 PSMC5P62195 406 aa21.15■□□□□ 0.98
CDC42EP1-201ENST00000249014 AMACRQ9UHK6 382 aa21.15■□□□□ 0.98
CDC42EP1-201ENST00000249014 RIPK3Q9Y572 518 aa21.15■□□□□ 0.98
CDC42EP1-201ENST00000249014 COL11A1P12107 1806 aaPredicted RBP21.14■□□□□ 0.98
CDC42EP1-201ENST00000249014 TESPA1A2RU30 521 aaPredicted RBP21.14■□□□□ 0.98
CDC42EP1-201ENST00000249014 CCDC188H7C350 402 aa21.14■□□□□ 0.98
CDC42EP1-201ENST00000249014 P4HA2O15460 535 aa21.14■□□□□ 0.98
CDC42EP1-201ENST00000249014 XKR9Q5GH70 373 aa21.14■□□□□ 0.98
CDC42EP1-201ENST00000249014 FAM102BQ5T8I3 360 aa21.14■□□□□ 0.98
CDC42EP1-201ENST00000249014 NSMFQ6X4W1 530 aa21.14■□□□□ 0.98
CDC42EP1-201ENST00000249014 TMEM117Q9H0C3 514 aa21.14■□□□□ 0.98
CDC42EP1-201ENST00000249014 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.14■□□□□ 0.987e-7■■■■■ 65
CDC42EP1-201ENST00000249014 WDR64B1ANS9 1081 aa21.14■□□□□ 0.97
CDC42EP1-201ENST00000249014 CLSTN1O94985 981 aa21.14■□□□□ 0.97
CDC42EP1-201ENST00000249014 ADSSP30520 456 aa21.14■□□□□ 0.97
CDC42EP1-201ENST00000249014 CETN1Q12798 172 aa21.14■□□□□ 0.97
CDC42EP1-201ENST00000249014 HLTFQ14527 1009 aaKnown RBP eCLIP21.14■□□□□ 0.97
CDC42EP1-201ENST00000249014 KIFC3Q9BVG8 833 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms